Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:20:43 (8970): wrapper (7.7.26015): starting
22:20:43 (8970): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 22:20:43] Arguments: --nthreads 8
[2026-01-10 22:20:43] Threads: 8
[2026-01-10 22:20:43] Checking for CVMFS
[2026-01-10 22:20:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:20:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:20:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:20:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:20:45] 2.11.2.0 22482 37370 102952 154992 2 60 20918531 25165824 96 130560 0 16309648 99.836 9837925 3763 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 22:20:45] CVMFS is ok
[2026-01-10 22:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:20:45] Checking for apptainer binary...
[2026-01-10 22:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 22:20:45] Running /usr/bin/apptainer --version
[2026-01-10 22:20:45] apptainer version 1.3.2-1.el7
[2026-01-10 22:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:20:58] cg-vwn445.simple-grid.lan
[2026-01-10 22:20:58] apptainer works
[2026-01-10 22:20:58] Set ATHENA_PROC_NUMBER=8
[2026-01-10 22:20:58] Set ATHENA_CORE_NUMBER=8
[2026-01-10 22:20:58] Starting ATLAS job with PandaID=6963197136
[2026-01-10 22:20:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 11:40:54]  *** The last 200 lines of the pilot log: ***
[2026-01-11 11:40:54] 2026-01-11 10:40:02,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:40:54] 2026-01-11 10:40:03,580 | INFO     | time since job start (47682s) is within the limit (349056.0s)
[2026-01-11 11:40:54] 2026-01-11 10:40:04,902 | INFO     | monitor loop #3284: job 0:6963197136 is in state 'finished'
[2026-01-11 11:40:54] 2026-01-11 10:40:04,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:40:54] 2026-01-11 10:40:05,590 | INFO     | time since job start (47684s) is within the limit (349056.0s)
[2026-01-11 11:40:54] 2026-01-11 10:40:06,737 | INFO     | PID=12689 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 11:40:54] 2026-01-11 10:40:06,737 | INFO     | .. there are 2 such processes running
[2026-01-11 11:40:54] 2026-01-11 10:40:07,405 | INFO     | monitor loop #3285: job 0:6963197136 is in state 'finished'
[2026-01-11 11:40:54] 2026-01-11 10:40:07,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:40:54] 2026-01-11 10:40:07,741 | INFO     | time since job start (47686s) is within the limit (349056.0s)
[2026-01-11 11:40:54] 2026-01-11 10:40:09,748 | INFO     | time since job start (47688s) is within the limit (349056.0s)
[2026-01-11 11:40:54] 2026-01-11 10:40:09,912 | INFO     | monitor loop #3286: job 0:6963197136 is in state 'finished'
[2026-01-11 11:40:54] 2026-01-11 10:40:09,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,756 | INFO     | time since job start (47690s) is within the limit (349056.0s)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,773 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 11:40:54] 2026-01-11 10:40:11,774 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 11:40:54] 2026-01-11 10:40:11,776 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963197136/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,776 | INFO     | extracted standard info from prmon json
[2026-01-11 11:40:54] 2026-01-11 10:40:11,777 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 11:40:54] 2026-01-11 10:40:11,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 11:40:54] 2026-01-11 10:40:11,792 | INFO     | fitting pss+swap vs Time
[2026-01-11 11:40:54] 2026-01-11 10:40:11,793 | INFO     | sum of square deviations: 142115861559.9916
[2026-01-11 11:40:54] 2026-01-11 10:40:11,817 | INFO     | sum of deviations: 1062533685455.382
[2026-01-11 11:40:54] 2026-01-11 10:40:11,817 | INFO     | mean x: 1768104396.002594
[2026-01-11 11:40:54] 2026-01-11 10:40:11,817 | INFO     | mean y: 2657612.308690013
[2026-01-11 11:40:54] 2026-01-11 10:40:11,817 | INFO     | intersect: -13216630224.619013
[2026-01-11 11:40:54] 2026-01-11 10:40:11,818 | INFO     | chi2: 32.33719492699261
[2026-01-11 11:40:54] 2026-01-11 10:40:11,820 | INFO     | sum of square deviations: 139369096977.43597
[2026-01-11 11:40:54] 2026-01-11 10:40:11,836 | INFO     | sum of deviations: 1312848721007.2974
[2026-01-11 11:40:54] 2026-01-11 10:40:11,836 | INFO     | mean x: 1768104243.5091383
[2026-01-11 11:40:54] 2026-01-11 10:40:11,836 | INFO     | mean y: 2671509.81462141
[2026-01-11 11:40:54] 2026-01-11 10:40:11,836 | INFO     | intersect: -16652766783.470448
[2026-01-11 11:40:54] 2026-01-11 10:40:11,837 | INFO     | chi2: 28.7022886306304
[2026-01-11 11:40:54] 2026-01-11 10:40:11,838 | INFO     | current chi2=28.7022886306304 (change=11.240635758817996 %)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,838 | INFO     | right removable region: 765
[2026-01-11 11:40:54] 2026-01-11 10:40:11,839 | INFO     | sum of square deviations: 139368625447.43597
[2026-01-11 11:40:54] 2026-01-11 10:40:11,855 | INFO     | sum of deviations: 751424263514.3376
[2026-01-11 11:40:54] 2026-01-11 10:40:11,856 | INFO     | mean x: 1768104548.5091383
[2026-01-11 11:40:54] 2026-01-11 10:40:11,856 | INFO     | mean y: 2674882.8093994777
[2026-01-11 11:40:54] 2026-01-11 10:40:11,856 | INFO     | intersect: -9530293200.318615
[2026-01-11 11:40:54] 2026-01-11 10:40:11,858 | INFO     | chi2: 27.063844612433872
[2026-01-11 11:40:54] 2026-01-11 10:40:11,858 | INFO     | current chi2=27.063844612433872 (change=16.3073832670531 %)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,858 | INFO     | left removable region: 10
[2026-01-11 11:40:54] 2026-01-11 10:40:11,859 | INFO     | sum of square deviations: 133450356971.57098
[2026-01-11 11:40:54] 2026-01-11 10:40:11,879 | INFO     | sum of deviations: 777006634422.2562
[2026-01-11 11:40:54] 2026-01-11 10:40:11,880 | INFO     | mean x: 1768104518.0238411
[2026-01-11 11:40:54] 2026-01-11 10:40:11,880 | INFO     | mean y: 2708544.263576159
[2026-01-11 11:40:54] 2026-01-11 10:40:11,880 | INFO     | intersect: -10291973103.902851
[2026-01-11 11:40:54] 2026-01-11 10:40:11,881 | INFO     | chi2: 18.13117770729414
[2026-01-11 11:40:54] 2026-01-11 10:40:11,881 | INFO     | current memory leak: 5.82 B/s (using 755 data points, chi2=18.13)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,882 | INFO     | could have reported an average CPU frequency of 1999 MHz (28 samples)
[2026-01-11 11:40:54] 2026-01-11 10:40:11,882 | INFO     | ..............................
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . Timing measurements:
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . get job = 0 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . initial setup = 12 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . payload setup = 187 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . stage-in = 0 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . payload execution = 47156 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . stage-out = 5 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | . log creation = 2 s
[2026-01-11 11:40:54] 2026-01-11 10:40:11,883 | INFO     | ..............................
[2026-01-11 11:40:54] 2026-01-11 10:40:12,000 | INFO     | 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | job summary report
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | --------------------------------------------------
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | PanDA job id: 6963197136
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | task id: 47962010
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | errors: (none)
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | pilot state: finished 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | transexitcode: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:12,001 | INFO     | exeerrorcode: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | exeerrordiag: 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | exitcode: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | exitmsg: OK
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | cpuconsumptiontime: 173205 s
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | nevents: 450
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | neventsw: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | pid: 19170
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | pgrp: 19170
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | corecount: 8
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | event service: False
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | sizes: {0: 2286787, 1: 2286986, 12: 2286986, 22: 2287014, 33: 2287042, 44: 2287098, 55: 2287254, 65: 2287282, 76: 2287310, 87: 2287366, 98: 2287394, 108: 2287702, 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,002 | INFO     | --------------------------------------------------
[2026-01-11 11:40:54] 2026-01-11 10:40:12,003 | INFO     | 
[2026-01-11 11:40:54] 2026-01-11 10:40:12,003 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-11 11:40:54] 2026-01-11 10:40:12,508 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 11:40:54] 2026-01-11 10:40:12,511 | INFO     | job 6963197136 has completed (purged errors)
[2026-01-11 11:40:54] 2026-01-11 10:40:12,511 | INFO     | overall cleanup function is called
[2026-01-11 11:40:54] 2026-01-11 10:40:13,526 | INFO     | --- collectZombieJob: --- 10, [19170]
[2026-01-11 11:40:54] 2026-01-11 10:40:13,526 | INFO     | zombie collector waiting for pid 19170
[2026-01-11 11:40:54] 2026-01-11 10:40:13,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 11:40:54] 2026-01-11 10:40:13,527 | INFO     | collected zombie processes
[2026-01-11 11:40:54] 2026-01-11 10:40:13,527 | INFO     | will attempt to kill all subprocesses of pid=19170
[2026-01-11 11:40:54] 2026-01-11 10:40:13,607 | INFO     | process IDs to be killed: [19170] (in reverse order)
[2026-01-11 11:40:54] 2026-01-11 10:40:13,655 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 11:40:54] 2026-01-11 10:40:13,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 11:40:54] 2026-01-11 10:40:13,658 | INFO     | did not find any defunct processes belonging to 19170
[2026-01-11 11:40:54] 2026-01-11 10:40:13,660 | INFO     | did not find any defunct processes belonging to 19170
[2026-01-11 11:40:54] 2026-01-11 10:40:13,660 | INFO     | ready for new job
[2026-01-11 11:40:54] 2026-01-11 10:40:13,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 11:40:54] 2026-01-11 10:40:13,664 | INFO     | ***************************************
[2026-01-11 11:40:54] 2026-01-11 10:40:13,668 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 11:40:54] 2026-01-11 10:40:13,668 | INFO     | ***************************************
[2026-01-11 11:40:54] 2026-01-11 10:40:13,668 | INFO     | 
[2026-01-11 11:40:54] 2026-01-11 10:40:13,669 | INFO     | pilot is running in a VM
[2026-01-11 11:40:54] 2026-01-11 10:40:13,669 | INFO     | architecture information:
[2026-01-11 11:40:54] 2026-01-11 10:40:13,669 | INFO     | executing command: cat /etc/os-release
[2026-01-11 11:40:54] 2026-01-11 10:40:14,002 | INFO     | cat /etc/os-release:
[2026-01-11 11:40:54] NAME="CentOS Linux"
[2026-01-11 11:40:54] VERSION="7 (Core)"
[2026-01-11 11:40:54] ID="centos"
[2026-01-11 11:40:54] ID_LIKE="rhel fedora"
[2026-01-11 11:40:54] VERSION_ID="7"
[2026-01-11 11:40:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 11:40:54] ANSI_COLOR="0;31"
[2026-01-11 11:40:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 11:40:54] HOME_URL="https://www.centos.org/"
[2026-01-11 11:40:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 11:40:54] 
[2026-01-11 11:40:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 11:40:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 11:40:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 11:40:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 11:40:54] 
[2026-01-11 11:40:54] 2026-01-11 10:40:14,003 | INFO     | ***************************************
[2026-01-11 11:40:54] 2026-01-11 10:40:14,506 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-11 11:40:54] 2026-01-11 10:40:14,894 | INFO     | sufficient remaining disk space (495961767936 B)
[2026-01-11 11:40:54] 2026-01-11 10:40:14,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 11:40:54] 2026-01-11 10:40:14,894 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 11:40:54] 2026-01-11 10:40:14,895 | INFO     | update_server=False
[2026-01-11 11:40:54] 2026-01-11 10:40:14,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 11:40:54] 2026-01-11 10:40:14,934 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 11:40:54] 2026-01-11 10:40:14,934 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 11:40:54] 2026-01-11 10:40:14,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:40:54] 2026-01-11 10:40:14,935 | INFO     | will abort loop
[2026-01-11 11:40:54] 2026-01-11 10:40:14,936 | INFO     | all data control threads have been joined
[2026-01-11 11:40:54] 2026-01-11 10:40:15,277 | INFO     | all job control threads have been joined
[2026-01-11 11:40:54] 2026-01-11 10:40:15,417 | INFO     | all payload control threads have been joined
[2026-01-11 11:40:54] 2026-01-11 10:40:15,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 11:40:54] 2026-01-11 10:40:15,901 | INFO     | [job] retrieve thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:15,940 | INFO     | [job] job monitor thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:15,942 | INFO     | [data] control thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:15,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 11:40:54] 2026-01-11 10:40:16,015 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,188 | INFO     | [payload] failed_post thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,241 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,283 | INFO     | [job] control thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,372 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,423 | INFO     | [payload] control thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,926 | INFO     | [data] copytool_in thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:16,937 | INFO     | [payload] validate_post thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:17,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:40:54] 2026-01-11 10:40:17,018 | INFO     | [job] validate thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:17,047 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:17,713 | INFO     | [data] copytool_out thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:18,022 | INFO     | [job] queue monitor thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:19,965 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 11:40:54] 2026-01-11 10:40:42,679 [wrapper] supervise_pilot (15 min periods counter: 54)
[2026-01-11 11:40:54] 2026-01-11 10:40:44,084 | INFO     | [monitor] cgroup control has ended
[2026-01-11 11:40:54] 2026-01-11 10:40:44,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387187156800)>', '<ExcThread(monitor, started 140386727073536)>']
[2026-01-11 11:40:54] 2026-01-11 10:40:44,955 | INFO     | PID=12689 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | INFO     | .. there are 2 such processes running
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 11:40:54] 2026-01-11 10:40:44,956 | INFO     | [monitor] control thread has ended
[2026-01-11 11:40:54] 2026-01-11 10:40:49,145 | INFO     | all workflow threads have been joined
[2026-01-11 11:40:54] 2026-01-11 10:40:49,145 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 11:40:54] 2026-01-11 10:40:49,146 | INFO     | traces error code: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:49,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 11:40:54] 2026-01-11 10:40:49,394 [wrapper] ==== pilot stdout END ====
[2026-01-11 11:40:54] 2026-01-11 10:40:49,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 11:40:54] 2026-01-11 10:40:49,539 [wrapper] pilotpid: 12689
[2026-01-11 11:40:54] 2026-01-11 10:40:49,643 [wrapper] Pilot exit status: 0
[2026-01-11 11:40:54] 2026-01-11 10:40:50,083 [wrapper] pandaids: 6963197136
[2026-01-11 11:40:54] 2026-01-11 10:40:51,068 [wrapper] cleanup supervisor_pilot  4302 12690
[2026-01-11 11:40:54] 2026-01-11 10:40:51,208 [wrapper] Test setup, not cleaning
[2026-01-11 11:40:54] 2026-01-11 10:40:51,344 [wrapper] apfmon messages muted
[2026-01-11 11:40:54] 2026-01-11 10:40:51,484 [wrapper] ==== wrapper stdout END ====
[2026-01-11 11:40:54] 2026-01-11 10:40:51,607 [wrapper] ==== wrapper stderr END ====
[2026-01-11 11:40:54]  *** Error codes and diagnostics ***
[2026-01-11 11:40:54]     "exeErrorCode": 0,
[2026-01-11 11:40:54]     "exeErrorDiag": "",
[2026-01-11 11:40:54]     "pilotErrorCode": 0,
[2026-01-11 11:40:54]     "pilotErrorDiag": "",
[2026-01-11 11:40:54]  *** Listing of results directory ***
[2026-01-11 11:40:54] total 1168880
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-11 11:40:54] -rwx------. 1 boinc boinc     36322 Jan  9 08:13 runpilot2-wrapper.sh
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc       100 Jan 10 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 11:40:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 22:20 run_atlas
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc       105 Jan 10 22:20 job.xml
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc 391722418 Jan 10 22:20 EVNT.47962006._000066.pool.root.1
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc 391133758 Jan 10 22:20 EVNT.47962006._000067.pool.root.1
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc     15897 Jan 10 22:20 start_atlas.sh
[2026-01-11 11:40:54] drwxrwx--x. 2 boinc boinc        88 Jan 10 22:20 shared
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc    592704 Jan 10 22:20 input.tar.gz
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc      6392 Jan 10 22:20 init_data.xml
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc         0 Jan 10 22:20 boinc_lockfile
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc      3421 Jan 10 22:20 pandaJob.out
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc    989548 Jan 10 22:25 agis_schedconf.cvmfs.json
[2026-01-11 11:40:54] drwx------. 5 boinc boinc      4096 Jan 10 22:25 pilot3
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc       533 Jan 11 11:10 boinc_task_state.xml
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc 393577117 Jan 11 11:37 HITS.47962010._000809.pool.root.1
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc      1029 Jan 11 11:38 memory_monitor_summary.json
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc   1516240 Jan 11 11:38 agis_ddmendpoints.agis.ALL.json
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc   1887881 Jan 11 11:38 log.47962010._000809.job.log.tgz.1
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc        95 Jan 11 11:40 pilot_heartbeat.json
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc      8808 Jan 11 11:40 heartbeat.json
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc        29 Jan 11 11:40 wrapper_checkpoint.txt
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc      8192 Jan 11 11:40 boinc_mmap_file
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc      5071 Jan 11 11:40 pilotlog.txt
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc   6407375 Jan 11 11:40 log.47962010._000809.job.log.1
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc       353 Jan 11 11:40 output.list
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc       620 Jan 11 11:40 runtime_log
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc   8314880 Jan 11 11:40 result.tar.gz
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc       661 Jan 11 11:40 X14NDm3rLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFFhKDm5Drlhm.diag
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc      8885 Jan 11 11:40 runtime_log.err
[2026-01-11 11:40:54] -rw-r--r--. 1 boinc boinc     21364 Jan 11 11:40 stderr.txt
[2026-01-11 11:40:54] HITS file was successfully produced:
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc 393577117 Jan 11 11:37 shared/HITS.pool.root.1
[2026-01-11 11:40:54]  *** Contents of shared directory: ***
[2026-01-11 11:40:54] total 1157584
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc 391722418 Jan 10 22:20 ATLAS.root_0
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc 391133758 Jan 10 22:20 ATLAS.root_1
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc     15897 Jan 10 22:20 start_atlas.sh
[2026-01-11 11:40:54] -rw-r--r--. 2 boinc boinc    592704 Jan 10 22:20 input.tar.gz
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc 393577117 Jan 11 11:37 HITS.pool.root.1
[2026-01-11 11:40:54] -rw-------. 1 boinc boinc   8314880 Jan 11 11:40 result.tar.gz
11:40:56 (8970): run_atlas exited; CPU time 173381.586755
11:40:56 (8970): called boinc_finish(0)

</stderr_txt>
]]>

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