Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:09 (3142828): wrapper (7.7.26015): starting
16:30:09 (3142828): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:30:09] Arguments: --nthreads 8
[2026-01-09 16:30:09] Threads: 8
[2026-01-09 16:30:09] Checking for CVMFS
[2026-01-09 16:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:30:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:30:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:30:11] 2.13.3.0 9597 23200 135952 154957 0 388 22035354 40960001 27050 16776704 0 110488272 99.655 97576981 46930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 16:30:11] CVMFS is ok
[2026-01-09 16:30:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:30:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:30:11] Further information can be found at the LHC@home message board.
[2026-01-09 16:30:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:30:11] Checking for apptainer binary...
[2026-01-09 16:30:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:30:11] Running /usr/bin/apptainer --version
[2026-01-09 16:30:11] apptainer version 1.4.5-2.el9
[2026-01-09 16:30:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:30:12] c-208-38.aglt2.org
[2026-01-09 16:30:12] apptainer works
[2026-01-09 16:30:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:30:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:30:12] Starting ATLAS job with PandaID=6963199502
[2026-01-09 16:30:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:16:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:16:28] 2026-01-10 03:15:42,798 | INFO     | time since job start (20647s) is within the limit (349056.0s)
[2026-01-09 22:16:28] 2026-01-10 03:15:44,215 | INFO     | monitor loop #1302: job 0:6963199502 is in state 'finished'
[2026-01-09 22:16:28] 2026-01-10 03:15:44,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:16:28] 2026-01-10 03:15:44,805 | INFO     | time since job start (20649s) is within the limit (349056.0s)
[2026-01-09 22:16:28] 2026-01-10 03:15:46,720 | INFO     | monitor loop #1303: job 0:6963199502 is in state 'finished'
[2026-01-09 22:16:28] 2026-01-10 03:15:46,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:16:28] 2026-01-10 03:15:46,812 | INFO     | time since job start (20651s) is within the limit (349056.0s)
[2026-01-09 22:16:28] 2026-01-10 03:15:48,959 | INFO     | PID=3152429 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:16:28] 2026-01-10 03:15:48,960 | INFO     | .. there are 24 such processes running
[2026-01-09 22:16:28] 2026-01-10 03:15:49,271 | INFO     | monitor loop #1304: job 0:6963199502 is in state 'finished'
[2026-01-09 22:16:28] 2026-01-10 03:15:49,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:16:28] 2026-01-10 03:15:49,961 | INFO     | time since job start (20654s) is within the limit (349056.0s)
[2026-01-09 22:16:28] 2026-01-10 03:15:51,778 | INFO     | monitor loop #1305: job 0:6963199502 is in state 'finished'
[2026-01-09 22:16:28] 2026-01-10 03:15:51,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:16:28] 2026-01-10 03:15:51,968 | INFO     | time since job start (20656s) is within the limit (349056.0s)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,926 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 22:16:28] 2026-01-10 03:15:52,930 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.990843750002
[2026-01-09 22:16:28] 2026-01-10 03:15:52,943 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963199502/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,943 | INFO     | extracted standard info from prmon json
[2026-01-09 22:16:28] 2026-01-10 03:15:52,944 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:16:28] 2026-01-10 03:15:52,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:16:28] 2026-01-10 03:15:52,947 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:16:28] 2026-01-10 03:15:52,947 | INFO     | sum of square deviations: 11764724760.330324
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | sum of deviations: 441569251685.0447
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | mean x: 1768004673.330357
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | mean y: 2552109.3779761903
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | intersect: -66356543958.09582
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | chi2: 28.043021313230717
[2026-01-09 22:16:28] 2026-01-10 03:15:52,949 | INFO     | sum of square deviations: 11247581688.32634
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | sum of deviations: 543019601525.891
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | mean x: 1768004520.858006
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | mean y: 2582039.3806646527
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | intersect: -85354531784.35962
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | chi2: 24.63947152235585
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | current chi2=24.63947152235585 (change=12.136886938316696 %)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | right removable region: 330
[2026-01-09 22:16:28] 2026-01-10 03:15:52,951 | INFO     | sum of square deviations: 11247206538.32634
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | sum of deviations: 313293930444.5591
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | mean x: 1768004825.858006
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | mean y: 2589911.5438066465
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | intersect: -49245654890.44307
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | chi2: 22.273609521838225
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | current chi2=22.273609521838225 (change=20.573431539170425 %)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,953 | INFO     | left removable region: 10
[2026-01-09 22:16:28] 2026-01-10 03:15:52,954 | INFO     | sum of square deviations: 10162981824.046875
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | sum of deviations: 322440863556.50006
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | mean x: 1768004795.421875
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | mean y: 2664518.1
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | intersect: -56090813053.5109
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | chi2: 13.439535028939781
[2026-01-09 22:16:28] 2026-01-10 03:15:52,955 | INFO     | current memory leak: 31.73 B/s (using 320 data points, chi2=13.44)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | could have reported an average CPU frequency of 3798 MHz (15 samples)
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | ..............................
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . Timing measurements:
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . get job = 0 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . initial setup = 7 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . payload setup = 56 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . stage-in = 0 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . payload execution = 20494 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . stage-out = 4 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | . log creation = 1 s
[2026-01-09 22:16:28] 2026-01-10 03:15:52,956 | INFO     | ..............................
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | 
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | job summary report
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | --------------------------------------------------
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | PanDA job id: 6963199502
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | task id: 47962010
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | errors: (none)
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | pilot state: finished 
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | transexitcode: 0
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | exeerrorcode: 0
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | exeerrordiag: 
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | exitcode: 0
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | exitmsg: OK
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | cpuconsumptiontime: 71633 s
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | nevents: 450
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | neventsw: 0
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | pid: 3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | pgrp: 3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | corecount: 8
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | event service: False
[2026-01-09 22:16:28] 2026-01-10 03:15:53,037 | INFO     | sizes: {0: 2283792, 1: 2284648, 12: 2284648, 23: 2284676, 32: 2284966, 33: 2284994, 20552: 2319716, 20553: 2319715, 20558: 2328765, 20560: 2328821, 20591: 2329067}
[2026-01-09 22:16:28] 2026-01-10 03:15:53,038 | INFO     | --------------------------------------------------
[2026-01-09 22:16:28] 2026-01-10 03:15:53,038 | INFO     | 
[2026-01-09 22:16:28] 2026-01-10 03:15:53,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | job 6963199502 has completed (purged errors)
[2026-01-09 22:16:28] 2026-01-10 03:15:53,111 | INFO     | overall cleanup function is called
[2026-01-09 22:16:28] 2026-01-10 03:15:54,160 | INFO     | --- collectZombieJob: --- 10, [3174917]
[2026-01-09 22:16:28] 2026-01-10 03:15:54,160 | INFO     | zombie collector waiting for pid 3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:54,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:16:28] 2026-01-10 03:15:54,161 | INFO     | collected zombie processes
[2026-01-09 22:16:28] 2026-01-10 03:15:54,161 | INFO     | will attempt to kill all subprocesses of pid=3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:54,964 | INFO     | process IDs to be killed: [3174917] (in reverse order)
[2026-01-09 22:16:28] 2026-01-10 03:15:55,134 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:16:28] 2026-01-10 03:15:55,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:16:28] 2026-01-10 03:15:55,186 | INFO     | did not find any defunct processes belonging to 3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:55,239 | INFO     | did not find any defunct processes belonging to 3174917
[2026-01-09 22:16:28] 2026-01-10 03:15:55,240 | INFO     | ready for new job
[2026-01-09 22:16:28] 2026-01-10 03:15:55,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:16:28] 2026-01-10 03:15:55,256 | INFO     | ***************************************
[2026-01-09 22:16:28] 2026-01-10 03:15:55,256 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:16:28] 2026-01-10 03:15:55,256 | INFO     | ***************************************
[2026-01-09 22:16:28] 2026-01-10 03:15:55,256 | INFO     | 
[2026-01-09 22:16:28] 2026-01-10 03:15:55,265 | INFO     | architecture information:
[2026-01-09 22:16:28] 2026-01-10 03:15:55,265 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:16:28] 2026-01-10 03:15:55,333 | INFO     | cat /etc/os-release:
[2026-01-09 22:16:28] NAME="CentOS Linux"
[2026-01-09 22:16:28] VERSION="7 (Core)"
[2026-01-09 22:16:28] ID="centos"
[2026-01-09 22:16:28] ID_LIKE="rhel fedora"
[2026-01-09 22:16:28] VERSION_ID="7"
[2026-01-09 22:16:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:16:28] ANSI_COLOR="0;31"
[2026-01-09 22:16:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:16:28] HOME_URL="https://www.centos.org/"
[2026-01-09 22:16:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:16:28] 
[2026-01-09 22:16:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:16:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:16:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:16:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:16:28] 
[2026-01-09 22:16:28] 2026-01-10 03:15:55,333 | INFO     | ***************************************
[2026-01-09 22:16:28] 2026-01-10 03:15:55,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:16:28] 2026-01-10 03:15:55,942 | INFO     | sufficient remaining disk space (169922789376 B)
[2026-01-09 22:16:28] 2026-01-10 03:15:55,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:16:28] 2026-01-10 03:15:55,942 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:16:28] 2026-01-10 03:15:55,942 | INFO     | update_server=False
[2026-01-09 22:16:28] 2026-01-10 03:15:55,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:16:28] 2026-01-10 03:15:55,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:16:28] 2026-01-10 03:15:55,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:16:28] 2026-01-10 03:15:55,944 | INFO     | aborting loop
[2026-01-09 22:16:28] 2026-01-10 03:15:55,996 | INFO     | all data control threads have been joined
[2026-01-09 22:16:28] 2026-01-10 03:15:56,099 | INFO     | all payload control threads have been joined
[2026-01-09 22:16:28] 2026-01-10 03:15:56,511 | INFO     | all job control threads have been joined
[2026-01-09 22:16:28] 2026-01-10 03:15:56,949 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:56,950 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:56,977 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,002 | INFO     | [data] control thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,105 | INFO     | [payload] control thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,262 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,517 | INFO     | [job] control thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,550 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,671 | INFO     | [job] validate thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,786 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,836 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:57,951 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:58,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:16:28] 2026-01-10 03:15:58,227 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:15:58,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:16:28] 2026-01-10 03:15:59,070 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:16:02,807 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:16:06,855 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:16:28] 2026-01-10 03:16:07,861 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:16:28] 2026-01-10 03:16:10,869 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:16:28] 2026-01-10 03:16:11,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022163572544)>', '<ExcThread(monitor, started 140021621315328)>']
[2026-01-09 22:16:28] 2026-01-10 03:16:16,258 | INFO     | all workflow threads have been joined
[2026-01-09 22:16:28] 2026-01-10 03:16:16,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:16:28] 2026-01-10 03:16:16,258 | INFO     | traces error code: 0
[2026-01-09 22:16:28] 2026-01-10 03:16:16,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:16:28] 2026-01-10 03:16:25,589 [wrapper] supervise_pilot (15 min periods counter: 24)
[2026-01-09 22:16:28] 2026-01-10 03:16:26,093 | INFO     | PID=3152429 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:16:28] 2026-01-10 03:16:26,093 | INFO     | .. there are 25 such processes running
[2026-01-09 22:16:28] 2026-01-10 03:16:26,093 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:16:28] 2026-01-10 03:16:26,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:16:28] 2026-01-10 03:16:26,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:16:28] 2026-01-10 03:16:26,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:16:28] 2026-01-10 03:16:26,094 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 22:16:28] 2026-01-10 03:16:26,094 | INFO     | [monitor] control thread has ended
[2026-01-09 22:16:28] 2026-01-10 03:16:26,612 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:16:28] 2026-01-10 03:16:26,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:16:28] 2026-01-10 03:16:26,691 [wrapper] pilotpid: 3152429
[2026-01-09 22:16:28] 2026-01-10 03:16:26,719 [wrapper] Pilot exit status: 0
[2026-01-09 22:16:28] 2026-01-10 03:16:26,833 [wrapper] pandaids: 6963199502
[2026-01-09 22:16:28] 2026-01-10 03:16:27,142 [wrapper] cleanup supervisor_pilot  753575 3152430
[2026-01-09 22:16:28] 2026-01-10 03:16:27,177 [wrapper] Test setup, not cleaning
[2026-01-09 22:16:28] 2026-01-10 03:16:27,226 [wrapper] apfmon messages muted
[2026-01-09 22:16:28] 2026-01-10 03:16:27,262 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:16:28] 2026-01-10 03:16:27,310 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:16:28]  *** Error codes and diagnostics ***
[2026-01-09 22:16:28]     "exeErrorCode": 0,
[2026-01-09 22:16:28]     "exeErrorDiag": "",
[2026-01-09 22:16:28]     "pilotErrorCode": 0,
[2026-01-09 22:16:28]     "pilotErrorDiag": "",
[2026-01-09 22:16:28]  *** Listing of results directory ***
[2026-01-09 22:16:28] total 780404
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-09 22:16:28] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:16:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:30 run_atlas
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:30 job.xml
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas 393424110 Jan  9 16:30 EVNT.47962006._000071.pool.root.1
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:30 start_atlas.sh
[2026-01-09 22:16:28] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:30 shared
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas    592606 Jan  9 16:30 input.tar.gz
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:30 boinc_lockfile
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 16:30 pandaJob.out
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas        57 Jan  9 16:30 setup.sh.local
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas    989398 Jan  9 16:31 agis_schedconf.cvmfs.json
[2026-01-09 22:16:28] drwx------. 5 boincer umatlas      4096 Jan  9 16:31 pilot3
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas       532 Jan  9 22:00 boinc_task_state.xml
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas      7185 Jan  9 22:10 init_data.xml
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas 393389994 Jan  9 22:14 HITS.47962010._000906.pool.root.1
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas      1064 Jan  9 22:15 memory_monitor_summary.json
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas   1506265 Jan  9 22:15 log.47962010._000906.job.log.tgz.1
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas      8612 Jan  9 22:15 heartbeat.json
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas        95 Jan  9 22:16 pilot_heartbeat.json
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas       893 Jan  9 22:16 pilotlog.txt
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas   2696372 Jan  9 22:16 log.47962010._000906.job.log.1
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:16 wrapper_checkpoint.txt
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas       353 Jan  9 22:16 output.list
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:16 boinc_mmap_file
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:16 runtime_log
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas   4218880 Jan  9 22:16 result.tar.gz
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 22:16 runtime_log.err
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas       664 Jan  9 22:16 69gLDmFsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyFhKDm6ijz8m.diag
[2026-01-09 22:16:28] -rw-r--r--. 1 boincer umatlas     21442 Jan  9 22:16 stderr.txt
[2026-01-09 22:16:28] HITS file was successfully produced:
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas 393389994 Jan  9 22:14 shared/HITS.pool.root.1
[2026-01-09 22:16:28]  *** Contents of shared directory: ***
[2026-01-09 22:16:28] total 773100
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas 393424110 Jan  9 16:30 ATLAS.root_0
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:30 start_atlas.sh
[2026-01-09 22:16:28] -rw-r--r--. 2 boincer umatlas    592606 Jan  9 16:30 input.tar.gz
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas 393389994 Jan  9 22:14 HITS.pool.root.1
[2026-01-09 22:16:28] -rw-------. 1 boincer umatlas   4218880 Jan  9 22:16 result.tar.gz
22:16:49 (3142828): run_atlas exited; CPU time 71955.187545
22:16:49 (3142828): called boinc_finish(0)

</stderr_txt>
]]>

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