Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:18:13 (3504211): wrapper (7.7.26015): starting
16:18:13 (3504211): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 16:18:13] Arguments: --nthreads 12
[2026-01-09 16:18:13] Threads: 12
[2026-01-09 16:18:13] Checking for CVMFS
[2026-01-09 16:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:18:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:18:14] 2.13.3.0 9185 93895 345132 154957 2 182 19255962 32935936 21008 16776704 0 436806207 99.718 309269327 32535 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:18:14] CVMFS is ok
[2026-01-09 16:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:18:14] Further information can be found at the LHC@home message board.
[2026-01-09 16:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:18:14] Checking for apptainer binary...
[2026-01-09 16:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:18:14] Running /usr/bin/apptainer --version
[2026-01-09 16:18:14] apptainer version 1.4.5-2.el9
[2026-01-09 16:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:18:15] c-5-6.aglt2.org
[2026-01-09 16:18:15] apptainer works
[2026-01-09 16:18:15] Set ATHENA_PROC_NUMBER=12
[2026-01-09 16:18:15] Set ATHENA_CORE_NUMBER=12
[2026-01-09 16:18:15] Starting ATLAS job with PandaID=6963194233
[2026-01-09 16:18:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:49:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:49:56] 2026-01-10 12:48:48,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,069 | INFO     | PID=3511226 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,069 | INFO     | .. there are 20 such processes running
[2026-01-10 07:49:56] 2026-01-10 12:48:50,316 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:49:56] 2026-01-10 12:48:50,322 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.09935
[2026-01-10 07:49:56] 2026-01-10 12:48:50,329 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963194233/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,330 | INFO     | extracted standard info from prmon json
[2026-01-10 07:49:56] 2026-01-10 12:48:50,330 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:49:56] 2026-01-10 12:48:50,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:49:56] 2026-01-10 12:48:50,347 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:49:56] 2026-01-10 12:48:50,349 | INFO     | sum of square deviations: 235964263641.33173
[2026-01-10 07:49:56] 2026-01-10 12:48:50,369 | INFO     | sum of deviations: 2840130693928.9854
[2026-01-10 07:49:56] 2026-01-10 12:48:50,370 | INFO     | mean x: 1768021456.7064621
[2026-01-10 07:49:56] 2026-01-10 12:48:50,370 | INFO     | mean y: 3267022.018619934
[2026-01-10 07:49:56] 2026-01-10 12:48:50,370 | INFO     | intersect: -21277124886.60387
[2026-01-10 07:49:56] 2026-01-10 12:48:50,371 | INFO     | chi2: 9.117131962915987
[2026-01-10 07:49:56] 2026-01-10 12:48:50,372 | INFO     | sum of square deviations: 232109910462.61728
[2026-01-10 07:49:56] 2026-01-10 12:48:50,392 | INFO     | sum of deviations: 3083771832255.7495
[2026-01-10 07:49:56] 2026-01-10 12:48:50,392 | INFO     | mean x: 1768021304.2378855
[2026-01-10 07:49:56] 2026-01-10 12:48:50,392 | INFO     | mean y: 3276649.454845815
[2026-01-10 07:49:56] 2026-01-10 12:48:50,392 | INFO     | intersect: -23486346374.26766
[2026-01-10 07:49:56] 2026-01-10 12:48:50,394 | INFO     | chi2: 7.297401596949243
[2026-01-10 07:49:56] 2026-01-10 12:48:50,394 | INFO     | current chi2=7.297401596949243 (change=19.959460643637865 %)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,394 | INFO     | right removable region: 907
[2026-01-10 07:49:56] 2026-01-10 12:48:50,395 | INFO     | sum of square deviations: 232106732362.61728
[2026-01-10 07:49:56] 2026-01-10 12:48:50,415 | INFO     | sum of deviations: 2438675342749.398
[2026-01-10 07:49:56] 2026-01-10 12:48:50,415 | INFO     | mean x: 1768021609.2378855
[2026-01-10 07:49:56] 2026-01-10 12:48:50,415 | INFO     | mean y: 3282891.6046255506
[2026-01-10 07:49:56] 2026-01-10 12:48:50,415 | INFO     | intersect: -18572786229.736237
[2026-01-10 07:49:56] 2026-01-10 12:48:50,416 | INFO     | chi2: 5.168600588553183
[2026-01-10 07:49:56] 2026-01-10 12:48:50,417 | INFO     | current chi2=5.168600588553183 (change=43.30891984917505 %)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,418 | INFO     | sum of square deviations: 228291434432.08856
[2026-01-10 07:49:56] 2026-01-10 12:48:50,437 | INFO     | sum of deviations: 2101329527234.1726
[2026-01-10 07:49:56] 2026-01-10 12:48:50,437 | INFO     | mean x: 1768021761.7696567
[2026-01-10 07:49:56] 2026-01-10 12:48:50,437 | INFO     | mean y: 3296371.5537098562
[2026-01-10 07:49:56] 2026-01-10 12:48:50,437 | INFO     | intersect: -16270622718.057808
[2026-01-10 07:49:56] 2026-01-10 12:48:50,439 | INFO     | chi2: 2.481143840572829
[2026-01-10 07:49:56] 2026-01-10 12:48:50,439 | INFO     | current chi2=2.481143840572829 (change=51.99582946943553 %)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,440 | INFO     | sum of square deviations: 224519018116.58905
[2026-01-10 07:49:56] 2026-01-10 12:48:50,461 | INFO     | sum of deviations: 1990763613142.6035
[2026-01-10 07:49:56] 2026-01-10 12:48:50,462 | INFO     | mean x: 1768021914.2839644
[2026-01-10 07:49:56] 2026-01-10 12:48:50,462 | INFO     | mean y: 3300835.021158129
[2026-01-10 07:49:56] 2026-01-10 12:48:50,462 | INFO     | intersect: -15673383143.560637
[2026-01-10 07:49:56] 2026-01-10 12:48:50,463 | INFO     | chi2: 2.1925799435887683
[2026-01-10 07:49:56] 2026-01-10 12:48:50,463 | INFO     | current chi2=2.1925799435887683 (change=11.63027682092946 %)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,463 | INFO     | left removable region: 30
[2026-01-10 07:49:56] 2026-01-10 12:48:50,466 | INFO     | sum of square deviations: 209135311209.6424
[2026-01-10 07:49:56] 2026-01-10 12:48:50,489 | INFO     | sum of deviations: 2065107163167.838
[2026-01-10 07:49:56] 2026-01-10 12:48:50,490 | INFO     | mean x: 1768022188.777651
[2026-01-10 07:49:56] 2026-01-10 12:48:50,490 | INFO     | mean y: 3319402.5324971494
[2026-01-10 07:49:56] 2026-01-10 12:48:50,490 | INFO     | intersect: -17455020203.37173
[2026-01-10 07:49:56] 2026-01-10 12:48:50,491 | INFO     | chi2: 0.20098242418487097
[2026-01-10 07:49:56] 2026-01-10 12:48:50,491 | INFO     | current memory leak: 9.87 B/s (using 877 data points, chi2=0.20)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | could have reported an average CPU frequency of 2600 MHz (34 samples)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | ..............................
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . Timing measurements:
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . get job = 0 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . initial setup = 3 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . payload setup = 29 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . stage-in = 0 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,493 | INFO     | . payload execution = 55708 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,494 | INFO     | . stage-out = 3 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,494 | INFO     | . log creation = 0 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,494 | INFO     | ..............................
[2026-01-10 07:49:56] 2026-01-10 12:48:50,613 | INFO     | 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | job summary report
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | --------------------------------------------------
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | PanDA job id: 6963194233
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | task id: 47962010
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | errors: (none)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | pilot state: finished 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | transexitcode: 0
[2026-01-10 07:49:56] 2026-01-10 12:48:50,614 | INFO     | exeerrorcode: 0
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | exeerrordiag: 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | exitcode: 0
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | exitmsg: OK
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | cpuconsumptiontime: 171071 s
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | nevents: 450
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | neventsw: 0
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | pid: 3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | pgrp: 3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:50,615 | INFO     | corecount: 12
[2026-01-10 07:49:56] 2026-01-10 12:48:50,616 | INFO     | event service: False
[2026-01-10 07:49:56] 2026-01-10 12:48:50,616 | INFO     | sizes: {0: 2284449, 1: 2284648, 12: 2284648, 18: 2284938, 23: 2284966, 55741: 2334781, 55744: 2343831, 55749: 2344021}
[2026-01-10 07:49:56] 2026-01-10 12:48:50,616 | INFO     | --------------------------------------------------
[2026-01-10 07:49:56] 2026-01-10 12:48:50,616 | INFO     | 
[2026-01-10 07:49:56] 2026-01-10 12:48:50,616 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 07:49:56] 2026-01-10 12:48:50,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,639 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,639 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:49:56] 2026-01-10 12:48:50,640 | INFO     | job 6963194233 has completed (purged errors)
[2026-01-10 07:49:56] 2026-01-10 12:48:50,640 | INFO     | overall cleanup function is called
[2026-01-10 07:49:56] 2026-01-10 12:48:51,658 | INFO     | --- collectZombieJob: --- 10, [3527237]
[2026-01-10 07:49:56] 2026-01-10 12:48:51,659 | INFO     | zombie collector waiting for pid 3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:51,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:49:56] 2026-01-10 12:48:51,659 | INFO     | collected zombie processes
[2026-01-10 07:49:56] 2026-01-10 12:48:51,659 | INFO     | will attempt to kill all subprocesses of pid=3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:52,012 | INFO     | process IDs to be killed: [3527237] (in reverse order)
[2026-01-10 07:49:56] 2026-01-10 12:48:52,090 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:49:56] 2026-01-10 12:48:52,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:49:56] 2026-01-10 12:48:52,102 | INFO     | did not find any defunct processes belonging to 3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:52,114 | INFO     | did not find any defunct processes belonging to 3527237
[2026-01-10 07:49:56] 2026-01-10 12:48:52,115 | INFO     | ready for new job
[2026-01-10 07:49:56] 2026-01-10 12:48:52,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:49:56] 2026-01-10 12:48:52,118 | INFO     | ***************************************
[2026-01-10 07:49:56] 2026-01-10 12:48:52,119 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:49:56] 2026-01-10 12:48:52,119 | INFO     | ***************************************
[2026-01-10 07:49:56] 2026-01-10 12:48:52,119 | INFO     | 
[2026-01-10 07:49:56] 2026-01-10 12:48:52,121 | INFO     | architecture information:
[2026-01-10 07:49:56] 2026-01-10 12:48:52,121 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:49:56] 2026-01-10 12:48:52,135 | INFO     | cat /etc/os-release:
[2026-01-10 07:49:56] NAME="CentOS Linux"
[2026-01-10 07:49:56] VERSION="7 (Core)"
[2026-01-10 07:49:56] ID="centos"
[2026-01-10 07:49:56] ID_LIKE="rhel fedora"
[2026-01-10 07:49:56] VERSION_ID="7"
[2026-01-10 07:49:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:49:56] ANSI_COLOR="0;31"
[2026-01-10 07:49:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:49:56] HOME_URL="https://www.centos.org/"
[2026-01-10 07:49:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:49:56] 
[2026-01-10 07:49:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:49:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:49:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:49:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:49:56] 
[2026-01-10 07:49:56] 2026-01-10 12:48:52,135 | INFO     | ***************************************
[2026-01-10 07:49:56] 2026-01-10 12:48:52,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 07:49:56] 2026-01-10 12:48:52,656 | INFO     | sufficient remaining disk space (75957796864 B)
[2026-01-10 07:49:56] 2026-01-10 12:48:52,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:49:56] 2026-01-10 12:48:52,657 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:49:56] 2026-01-10 12:48:52,657 | INFO     | update_server=False
[2026-01-10 07:49:56] 2026-01-10 12:48:52,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:49:56] 2026-01-10 12:48:52,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:49:56] 2026-01-10 12:48:52,658 | INFO     | aborting loop
[2026-01-10 07:49:56] 2026-01-10 12:48:52,922 | INFO     | all job control threads have been joined
[2026-01-10 07:49:56] 2026-01-10 12:48:52,924 | INFO     | all payload control threads have been joined
[2026-01-10 07:49:56] 2026-01-10 12:48:53,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:49:56] 2026-01-10 12:48:53,524 | INFO     | all data control threads have been joined
[2026-01-10 07:49:56] 2026-01-10 12:48:53,663 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,663 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,801 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,855 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,877 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,928 | INFO     | [job] control thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,929 | INFO     | [payload] control thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:53,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:54,160 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:54,321 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:54,529 | INFO     | [data] control thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:54,623 | INFO     | [job] validate thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:55,053 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:55,357 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:55,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:49:56] 2026-01-10 12:48:55,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:49:56] 2026-01-10 12:48:56,628 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:48:59,957 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:49:56] 2026-01-10 12:49:09,718 [wrapper] supervise_pilot (15 min periods counter: 63)
[2026-01-10 07:49:56] 2026-01-10 12:49:22,555 | INFO     | PID=3511226 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:49:56] 2026-01-10 12:49:22,555 | INFO     | .. there are 20 such processes running
[2026-01-10 07:49:56] 2026-01-10 12:49:22,557 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:49:56] 2026-01-10 12:49:22,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:49:56] 2026-01-10 12:49:22,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:49:56] 2026-01-10 12:49:50,897 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:49:56] 2026-01-10 12:49:51,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939701897024)>', '<ExcThread(monitor, started 139939203237632)>']
[2026-01-10 07:49:56] 2026-01-10 12:49:51,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:49:56] 2026-01-10 12:49:51,695 | INFO     | [monitor] control thread has ended
[2026-01-10 07:49:56] 2026-01-10 12:49:56,128 | INFO     | all workflow threads have been joined
[2026-01-10 07:49:56] 2026-01-10 12:49:56,128 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:49:56] 2026-01-10 12:49:56,128 | INFO     | traces error code: 0
[2026-01-10 07:49:56] 2026-01-10 12:49:56,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:49:56] 2026-01-10 12:49:56,276 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:49:56] 2026-01-10 12:49:56,279 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:49:56] 2026-01-10 12:49:56,282 [wrapper] pilotpid: 3511226
[2026-01-10 07:49:56] 2026-01-10 12:49:56,285 [wrapper] Pilot exit status: 0
[2026-01-10 07:49:56] 2026-01-10 12:49:56,296 [wrapper] pandaids: 6963194233
[2026-01-10 07:49:56] 2026-01-10 12:49:56,369 [wrapper] cleanup supervisor_pilot 2337430 3511227
[2026-01-10 07:49:56] 2026-01-10 12:49:56,372 [wrapper] Test setup, not cleaning
[2026-01-10 07:49:56] 2026-01-10 12:49:56,374 [wrapper] apfmon messages muted
[2026-01-10 07:49:56] 2026-01-10 12:49:56,377 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:49:56] 2026-01-10 12:49:56,379 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:49:56]  *** Error codes and diagnostics ***
[2026-01-10 07:49:56]     "exeErrorCode": 0,
[2026-01-10 07:49:56]     "exeErrorDiag": "",
[2026-01-10 07:49:56]     "pilotErrorCode": 0,
[2026-01-10 07:49:56]     "pilotErrorDiag": "",
[2026-01-10 07:49:56]  *** Listing of results directory ***
[2026-01-10 07:49:56] total 801468
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 07:49:56] -rwx------. 1 boincer umatlas     36322 Jan  9 02:13 runpilot2-wrapper.sh
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:49:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:18 run_atlas
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:18 job.xml
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas 395458336 Jan  9 16:18 EVNT.47962006._000056.pool.root.1
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:18 start_atlas.sh
[2026-01-10 07:49:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:18 shared
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 16:18 input.tar.gz
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:18 boinc_lockfile
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 16:18 pandaJob.out
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas        57 Jan  9 16:18 setup.sh.local
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas    989398 Jan  9 16:18 agis_schedconf.cvmfs.json
[2026-01-10 07:49:56] drwx------. 5 boincer umatlas      4096 Jan  9 16:19 pilot3
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas       533 Jan 10 07:40 boinc_task_state.xml
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas 403889268 Jan 10 07:48 HITS.47962010._000572.pool.root.1
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas      1068 Jan 10 07:48 memory_monitor_summary.json
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 07:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas   2313717 Jan 10 07:48 log.47962010._000572.job.log.tgz.1
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas      8644 Jan 10 07:48 heartbeat.json
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas        95 Jan 10 07:49 pilot_heartbeat.json
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas      6659 Jan 10 07:49 init_data.xml
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 07:49 boinc_mmap_file
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas        29 Jan 10 07:49 wrapper_checkpoint.txt
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas      4824 Jan 10 07:49 pilotlog.txt
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas   6402284 Jan 10 07:49 log.47962010._000572.job.log.1
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas       353 Jan 10 07:49 output.list
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 07:49 runtime_log
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas   8734720 Jan 10 07:49 result.tar.gz
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas      9330 Jan 10 07:49 runtime_log.err
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas       662 Jan 10 07:49 MoFODm3rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkQmKDmQg2QTo.diag
[2026-01-10 07:49:56] -rw-r--r--. 1 boincer umatlas     21297 Jan 10 07:49 stderr.txt
[2026-01-10 07:49:56] HITS file was successfully produced:
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas 403889268 Jan 10 07:48 shared/HITS.pool.root.1
[2026-01-10 07:49:56]  *** Contents of shared directory: ***
[2026-01-10 07:49:56] total 789752
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas 395458336 Jan  9 16:18 ATLAS.root_0
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:18 start_atlas.sh
[2026-01-10 07:49:56] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 16:18 input.tar.gz
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas 403889268 Jan 10 07:48 HITS.pool.root.1
[2026-01-10 07:49:56] -rw-------. 1 boincer umatlas   8734720 Jan 10 07:49 result.tar.gz
07:49:57 (3504211): run_atlas exited; CPU time 171896.210315
07:49:57 (3504211): called boinc_finish(0)

</stderr_txt>
]]>

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