Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 20:48:42 (8580): vboxwrapper version 26210
2026-01-10 20:48:42 (8580): BOINC client version: 8.2.8
2026-01-10 20:48:42 (8580): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-10 20:48:43 (8580): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 20:48:43 (8580): Create VM. (boinc_e63562899f3e4a36, slot#2)
2026-01-10 20:48:43 (8580): Setting Memory Size for VM. (4700MB)
2026-01-10 20:48:44 (8580): Setting CPU Count for VM. (7)
2026-01-10 20:48:44 (8580): Setting Chipset Options for VM.
2026-01-10 20:48:44 (8580): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 20:48:44 (8580): Setting Boot Options for VM.
2026-01-10 20:48:45 (8580): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 20:48:45 (8580): Enabling VM Network Access.
2026-01-10 20:48:45 (8580): Disabling USB Support for VM.
2026-01-10 20:48:46 (8580): Disabling COM Port Support for VM.
2026-01-10 20:48:46 (8580): Disabling LPT Port Support for VM.
2026-01-10 20:48:46 (8580): Disabling Audio Support for VM.
2026-01-10 20:48:46 (8580): Disabling Clipboard Support for VM.
2026-01-10 20:48:47 (8580): Disabling Drag and Drop Support for VM.
2026-01-10 20:48:47 (8580): Adding storage controller(s) to VM.
2026-01-10 20:48:47 (8580): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 20:48:48 (8580): Adding VirtualBox Guest Additions to VM.
2026-01-10 20:48:48 (8580): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 20:48:48 (8580): forwarding host port 62845 to guest port 80
2026-01-10 20:48:48 (8580): Enabling remote desktop for VM.
2026-01-10 20:48:49 (8580): Required extension pack not installed, remote desktop not enabled.
2026-01-10 20:48:49 (8580): Enabling shared directory for VM.
2026-01-10 20:48:49 (8580): Starting VM using VBoxManage interface. (boinc_e63562899f3e4a36, slot#2)
2026-01-10 20:48:53 (8580): Successfully started VM. (PID = '10100')
2026-01-10 20:48:53 (8580): Reporting VM Process ID to BOINC.
2026-01-10 20:48:53 (8580): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-10 20:48:53 (8580): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 20:48:53 (8580): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 20:48:53 (8580): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 20:48:53 (8580): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 20:48:53 (8580): Detected: Web Application Enabled (http://localhost:62845)
2026-01-10 20:48:53 (8580): Preference change detected
2026-01-10 20:48:53 (8580): Setting CPU throttle for VM. (100%)
2026-01-10 20:48:53 (8580): Setting checkpoint interval to 3300 seconds. (Higher value of (Preference: 3300 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 20:48:55 (8580): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 20:48:55 (8580): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 20:48:58 (8580): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 20:48:58 (8580): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 20:48:58 (8580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 20:49:03 (8580): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 20:49:03 (8580): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 20:49:07 (8580): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000121 main     Log opened 2026-01-10T20:49:05.001065000Z
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000200 main     OS Product: Linux
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000239 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000261 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000283 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000284 main     Process ID: 1353
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.000284 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 20:49:07 (8580): Guest Log: 00:00:00.001784 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 20:49:07 (8580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 20:49:07 (8580): Guest Log: [INFO] Mounting shared directory
2026-01-10 20:49:07 (8580): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 20:49:14 (8580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 20:49:14 (8580): Guest Log: [INFO] Detected branch: prod
2026-01-10 20:49:14 (8580): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 20:49:14 (8580): Guest Log: Copying input files
2026-01-10 20:49:15 (8580): Guest Log: Copied input files into RunAtlas.
2026-01-10 20:49:15 (8580): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 20:49:15 (8580): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 20:49:15 (8580): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 20:49:15 (8580): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 20:49:17 (8580): Guest Log: 00:00:10.004403 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 169 793 000ns (GuestNow=1 768 045 756 834 260 000 ns GuestLast=1 768 078 145 004 053 000 ns fSetTimeLastLoop=true )
2026-01-10 20:49:25 (8580): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 20:49:25 (8580): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 20:49:25 (8580): Guest Log: 2.6.3.0 1631 0 30004 154978 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 20:49:26 (8580): Guest Log: copied the webapp to /var/www
2026-01-10 20:49:26 (8580): Guest Log: ATHENA_PROC_NUMBER=7
2026-01-10 20:49:26 (8580): Guest Log: ATHENA_CORE_NUMBER=7
2026-01-10 20:49:26 (8580): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 20:49:26 (8580): Guest Log:  *** Starting ATLAS job. (PandaID=6963197071 taskID=47962010) ***
2026-01-10 22:21:55 (8580): VM state change detected. (old = 'running', new = 'paused')
2026-01-10 22:25:32 (8580): VM state change detected. (old = 'paused', new = 'running')
2026-01-10 22:32:36 (8580): Status Report: Elapsed Time: '6000.000000'
2026-01-10 22:32:36 (8580): Status Report: CPU Time: '35987.421875'
2026-01-10 23:22:20 (8580): Guest Log:  *** Job finished ***
2026-01-10 23:22:20 (8580): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:17:46,144 | INFO     | [data] copytool_out thread has finished
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:17:49,761 | INFO     | [data] queue_monitor thread has finished
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:38,196 | INFO     | [monitor] cgroup control has ended
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:38,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247939663680)>', '<ExcThread(monitor, started 140246897379072)>']
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:39,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:39,228 | INFO     | [monitor] control thread has ended
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,339 | INFO     | all workflow threads have been joined
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,339 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,339 | INFO     | traces error code: 0
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,402 [wrapper] ==== pilot stdout END ====
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,405 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,408 [wrapper] pilotpid: 6062
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,411 [wrapper] Pilot exit status: 0
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,422 [wrapper] pandaids: 6963197071
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,449 [wrapper] cleanup supervisor_pilot  6715 6063
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,453 [wrapper] Test setup, not cleaning
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,457 [wrapper] apfmon messages muted
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,460 [wrapper] ==== wrapper stdout END ====
2026-01-10 23:22:20 (8580): Guest Log: 2026-01-10 14:18:43,464 [wrapper] ==== wrapper stderr END ====
2026-01-10 23:22:20 (8580): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 23:22:20 (8580): Guest Log:     "exeErrorCode": 0,
2026-01-10 23:22:20 (8580): Guest Log:     "exeErrorDiag": "",
2026-01-10 23:22:20 (8580): Guest Log:     "pilotErrorCode": 0,
2026-01-10 23:22:20 (8580): Guest Log:     "pilotErrorDiag": "",
2026-01-10 23:22:20 (8580): Guest Log:  *** Listing of results directory ***
2026-01-10 23:22:20 (8580): Guest Log: total 393104
2026-01-10 23:22:20 (8580): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 07:13 pilot3.tar.gz
2026-01-10 23:22:20 (8580): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 07:13 runpilot2-wrapper.sh
2026-01-10 23:22:20 (8580): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 07:13 queuedata.json
2026-01-10 23:22:20 (8580): Guest Log: -rwxr-xr-x. 1 atlas atlas      8961 Jan 10 11:49 init_data.xml
2026-01-10 23:22:20 (8580): Guest Log: -rwxr-xr-x. 1 atlas atlas    592608 Jan 10 11:49 input.tar.gz
2026-01-10 23:22:20 (8580): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 11:49 start_atlas.sh
2026-01-10 23:22:20 (8580): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 11:49 EVNT.47962006._000064.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 23:22:20 (8580): Guest Log: -rw-r--r--. 1 atlas atlas      2890 Jan 10 11:49 pandaJob.out
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas    989564 Jan 10 11:50 agis_schedconf.cvmfs.json
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 11:50 agis_ddmendpoints.agis.ALL.json
2026-01-10 23:22:20 (8580): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 11:50 pilot3
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas 393699258 Jan 10 14:17 HITS.47962010._000744.pool.root.1
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 14:17 pilot_heartbeat.json
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 10 14:17 memory_monitor_summary.json
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas   1259669 Jan 10 14:17 log.47962010._000744.job.log.tgz.1
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas      8634 Jan 10 14:17 heartbeat.json
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas      4612 Jan 10 14:18 pilotlog.txt
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas   1236461 Jan 10 14:18 log.47962010._000744.job.log.1
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas       353 Jan 10 14:18 output.list
2026-01-10 23:22:20 (8580): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 14:18 runtime_log
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas   2519040 Jan 10 14:18 result.tar.gz
2026-01-10 23:22:20 (8580): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Jan 10 14:18 runtime_log.err
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas       655 Jan 10 14:18 bowNDm3rLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAFhKDmn53IBo.diag
2026-01-10 23:22:20 (8580): Guest Log: Looking for outputfile HITS.47962010._000744.pool.root.1
2026-01-10 23:22:20 (8580): Guest Log: HITS file was successfully produced
2026-01-10 23:22:20 (8580): Guest Log: -rw-------. 1 atlas atlas 393699258 Jan 10 14:17 /home/atlas/RunAtlas/HITS.47962010._000744.pool.root.1
2026-01-10 23:22:21 (8580): Guest Log: Successfully finished the ATLAS job!
2026-01-10 23:22:21 (8580): Guest Log: Copying the results back to the shared directory!
2026-01-10 23:22:22 (8580): Guest Log:  *** Contents of shared directory: ***
2026-01-10 23:22:22 (8580): Guest Log: total 769932
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root 391566827 Jan 10 11:48 ATLAS.root_0
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root 393699258 Jan 10  2026 HITS.pool.root.1
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root      8961 Jan 10 11:48 init_data.xml
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root    592608 Jan  9 21:28 input.tar.gz
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root   2519040 Jan 10  2026 result.tar.gz
2026-01-10 23:22:22 (8580): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 21:28 start_atlas.sh
2026-01-10 23:22:22 (8580): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 23:22:22 (8580): VM Completion File Detected.
2026-01-10 23:22:22 (8580): Powering off VM.
2026-01-10 23:22:22 (8580): Successfully stopped VM.
2026-01-10 23:22:22 (8580): Deregistering VM. (boinc_e63562899f3e4a36, slot#2)
2026-01-10 23:22:22 (8580): Removing network bandwidth throttle group from VM.
2026-01-10 23:22:22 (8580): Removing VM from VirtualBox.
2026-01-10 23:22:27 (8580): called boinc_finish(0)

</stderr_txt>
]]>

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