Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:34:19 (21576): wrapper (7.7.26015): starting
01:34:19 (21576): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 01:34:19] Arguments: --nthreads 8
[2026-01-10 01:34:19] Threads: 8
[2026-01-10 01:34:19] Checking for CVMFS
[2026-01-10 01:34:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:34:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:34:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:34:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:34:19] 2.11.0.0 5287 129881 96664 154962 1 57 2394192 4096000 0 130560 2 10402732 99.693 6998871 483 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 01:34:19] CVMFS is ok
[2026-01-10 01:34:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:34:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:34:19] Further information can be found at the LHC@home message board.
[2026-01-10 01:34:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:34:19] Checking for apptainer binary...
[2026-01-10 01:34:19] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 01:34:19] apptainer is not installed, using version from CVMFS
[2026-01-10 01:34:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:34:19] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009700/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node133
[2026-01-10 01:34:19] apptainer works
[2026-01-10 01:34:19] Set ATHENA_PROC_NUMBER=8
[2026-01-10 01:34:19] Set ATHENA_CORE_NUMBER=8
[2026-01-10 01:34:19] Starting ATLAS job with PandaID=6963195770
[2026-01-10 01:34:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009700/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:11:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:11:45] 2026-01-10 03:10:51,234 | INFO     | log transfer has been attempted: DONE
[2026-01-10 04:11:45] 2026-01-10 03:10:51,234 | INFO     | job 6963195770 has finished - writing final server update
[2026-01-10 04:11:45] 2026-01-10 03:10:51,234 | INFO     | total number of processed events: 450 (read)
[2026-01-10 04:11:45] 2026-01-10 03:10:51,234 | INFO     | executing command: lscpu
[2026-01-10 04:11:45] 2026-01-10 03:10:51,280 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 04:11:45] 2026-01-10 03:10:51,632 | WARNING  | process 2792 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 04:11:45] 2026-01-10 03:10:51,632 | INFO     | using path: /tmp/job_11009700/atlas/pilot/slots/0/PanDA_Pilot-6963195770/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:11:45] 2026-01-10 03:10:51,863 | INFO     | number of running child processes to parent process 2792: 1
[2026-01-10 04:11:45] 2026-01-10 03:10:51,864 | INFO     | maximum number of monitored processes: 16
[2026-01-10 04:11:45] 2026-01-10 03:10:52,854 | INFO     | time since job start (9387s) is within the limit (349056.0s)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,478 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 04:11:45] 2026-01-10 03:10:53,500 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2566.8049609374993
[2026-01-10 04:11:45] 2026-01-10 03:10:53,511 | INFO     | using path: /tmp/job_11009700/atlas/pilot/slots/0/PanDA_Pilot-6963195770/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,512 | INFO     | extracted standard info from prmon json
[2026-01-10 04:11:45] 2026-01-10 03:10:53,512 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:11:45] 2026-01-10 03:10:53,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:11:45] 2026-01-10 03:10:53,514 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:11:45] 2026-01-10 03:10:53,514 | INFO     | sum of square deviations: 1110539892.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,514 | INFO     | sum of deviations: 496406241579.00006
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | mean x: 1768009969.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | mean y: 3977253.3267973857
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | intersect: -790288375239.216
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | chi2: 5.870942705781409
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | sum of square deviations: 1005179777.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,515 | INFO     | sum of deviations: 499752662874.5
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | mean x: 1768009816.5
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | mean y: 3981049.493243243
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | intersect: -879010533569.15
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | chi2: 5.231012864721134
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | current chi2=5.231012864721134 (change=10.89995036793843 %)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | right removable region: 147
[2026-01-10 04:11:45] 2026-01-10 03:10:53,516 | INFO     | sum of square deviations: 1005179777.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | sum of deviations: 413038612525.49994
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | mean x: 1768010121.5
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | mean y: 4097766.5202702703
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | intersect: -726489276080.3757
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | chi2: 2.091743680688683
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | current chi2=2.091743680688683 (change=64.37124691016251 %)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | sum of square deviations: 906703512.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,517 | INFO     | sum of deviations: 373851268032.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | mean x: 1768010274.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | mean y: 4158197.5244755247
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | intersect: -728980426157.4369
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | chi2: 1.8769492855570369
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | current chi2=1.8769492855570369 (change=10.26867666027452 %)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | left removable region: 20
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | sum of square deviations: 635130048.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | sum of deviations: 317326856271.00006
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | mean x: 1768010396.0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,518 | INFO     | mean y: 4254841.141732284
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | intersect: -883337956071.112
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | chi2: 0.6319674779058188
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | current memory leak: 499.63 B/s (using 127 data points, chi2=0.63)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | could have reported an average CPU frequency of 2442 MHz (9 samples)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | ..............................
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . Timing measurements:
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . get job = 0 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . initial setup = 1 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . payload setup = 52 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . stage-in = 0 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . payload execution = 9311 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . stage-out = 0 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | . log creation = 0 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,519 | INFO     | ..............................
[2026-01-10 04:11:45] 2026-01-10 03:10:53,693 | INFO     | 
[2026-01-10 04:11:45] 2026-01-10 03:10:53,693 | INFO     | job summary report
[2026-01-10 04:11:45] 2026-01-10 03:10:53,693 | INFO     | --------------------------------------------------
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | PanDA job id: 6963195770
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | task id: 47962010
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | errors: (none)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | pilot state: finished 
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | transexitcode: 0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | exeerrorcode: 0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | exeerrordiag: 
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | exitcode: 0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | exitmsg: OK
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | cpuconsumptiontime: 69347 s
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | nevents: 450
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | neventsw: 0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | pid: 2792
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | pgrp: 2792
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | corecount: 8
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | event service: False
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | sizes: {0: 2284408, 1: 2284774, 3: 2285036, 11: 2285064, 9368: 2314218, 9369: 2323242, 9371: 2323426, 9376: 2323736}
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | --------------------------------------------------
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | 
[2026-01-10 04:11:45] 2026-01-10 03:10:53,694 | INFO     | executing command: ls -lF /tmp/job_11009700/atlas/pilot/slots/0
[2026-01-10 04:11:45] 2026-01-10 03:10:53,705 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,705 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,705 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | job 6963195770 has completed (purged errors)
[2026-01-10 04:11:45] 2026-01-10 03:10:53,706 | INFO     | overall cleanup function is called
[2026-01-10 04:11:45] 2026-01-10 03:10:54,714 | INFO     | --- collectZombieJob: --- 10, [2792]
[2026-01-10 04:11:45] 2026-01-10 03:10:54,714 | INFO     | zombie collector waiting for pid 2792
[2026-01-10 04:11:45] 2026-01-10 03:10:54,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:11:45] 2026-01-10 03:10:54,714 | INFO     | collected zombie processes
[2026-01-10 04:11:45] 2026-01-10 03:10:54,714 | INFO     | will attempt to kill all subprocesses of pid=2792
[2026-01-10 04:11:45] 2026-01-10 03:10:54,917 | INFO     | process IDs to be killed: [2792] (in reverse order)
[2026-01-10 04:11:45] 2026-01-10 03:10:54,978 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:11:45] 2026-01-10 03:10:54,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:11:45] 2026-01-10 03:10:54,986 | INFO     | did not find any defunct processes belonging to 2792
[2026-01-10 04:11:45] 2026-01-10 03:10:54,992 | INFO     | did not find any defunct processes belonging to 2792
[2026-01-10 04:11:45] 2026-01-10 03:10:54,992 | INFO     | ready for new job
[2026-01-10 04:11:45] 2026-01-10 03:10:54,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:11:45] 2026-01-10 03:10:54,993 | INFO     | ***************************************
[2026-01-10 04:11:45] 2026-01-10 03:10:54,993 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:11:45] 2026-01-10 03:10:54,993 | INFO     | ***************************************
[2026-01-10 04:11:45] 2026-01-10 03:10:54,993 | INFO     | 
[2026-01-10 04:11:45] 2026-01-10 03:10:55,008 | INFO     | architecture information:
[2026-01-10 04:11:45] 2026-01-10 03:10:55,009 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:11:45] 2026-01-10 03:10:55,016 | INFO     | cat /etc/os-release:
[2026-01-10 04:11:45] NAME="CentOS Linux"
[2026-01-10 04:11:45] VERSION="7 (Core)"
[2026-01-10 04:11:45] ID="centos"
[2026-01-10 04:11:45] ID_LIKE="rhel fedora"
[2026-01-10 04:11:45] VERSION_ID="7"
[2026-01-10 04:11:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:11:45] ANSI_COLOR="0;31"
[2026-01-10 04:11:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:11:45] HOME_URL="https://www.centos.org/"
[2026-01-10 04:11:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:11:45] 
[2026-01-10 04:11:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:11:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:11:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:11:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:11:45] 
[2026-01-10 04:11:45] 2026-01-10 03:10:55,017 | INFO     | ***************************************
[2026-01-10 04:11:45] 2026-01-10 03:10:55,519 | INFO     | executing command: df -mP /tmp/job_11009700/atlas/pilot/slots/0
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | INFO     | sufficient remaining disk space (223416942592 B)
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | INFO     | update_server=False
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:11:45] 2026-01-10 03:10:55,528 | INFO     | aborting loop
[2026-01-10 04:11:45] 2026-01-10 03:10:55,921 | INFO     | all job control threads have been joined
[2026-01-10 04:11:45] 2026-01-10 03:10:56,293 | INFO     | all data control threads have been joined
[2026-01-10 04:11:45] 2026-01-10 03:10:56,326 | INFO     | all payload control threads have been joined
[2026-01-10 04:11:45] 2026-01-10 03:10:56,533 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:56,533 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:56,533 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:56,605 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:56,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:11:45] 2026-01-10 03:10:56,884 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:56,927 | INFO     | [job] control thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,014 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,298 | INFO     | [data] control thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,331 | INFO     | [payload] control thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,771 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,851 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,952 | INFO     | [job] validate thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:57,963 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:58,827 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:10:59,534 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:11:06,049 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:11:45] 2026-01-10 03:11:07,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:11:45] 2026-01-10 03:11:26,178 | INFO     | PID=26286 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 04:11:45] 2026-01-10 03:11:26,178 | INFO     | .. there are 7 such processes running
[2026-01-10 04:11:45] 2026-01-10 03:11:26,178 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:11:45] 2026-01-10 03:11:26,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:11:45] 2026-01-10 03:11:26,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:11:45] 2026-01-10 03:11:40,240 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:11:45] 2026-01-10 03:11:40,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056616704)>']
[2026-01-10 04:11:45] 2026-01-10 03:11:41,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:11:45] 2026-01-10 03:11:41,254 | INFO     | [monitor] control thread has ended
[2026-01-10 04:11:45] 2026-01-10 03:11:45,520 | INFO     | all workflow threads have been joined
[2026-01-10 04:11:45] 2026-01-10 03:11:45,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:11:45] 2026-01-10 03:11:45,521 | INFO     | traces error code: 0
[2026-01-10 04:11:45] 2026-01-10 03:11:45,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:11:45] 2026-01-10 03:11:45,586 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:11:45] 2026-01-10 03:11:45,588 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:11:45] 2026-01-10 03:11:45,589 [wrapper] pilotpid: 26286
[2026-01-10 04:11:45] 2026-01-10 03:11:45,590 [wrapper] Pilot exit status: 0
[2026-01-10 04:11:45] 2026-01-10 03:11:45,595 [wrapper] pandaids: 6963195770
[2026-01-10 04:11:45] 2026-01-10 03:11:45,631 [wrapper] cleanup supervisor_pilot 23758 26287
[2026-01-10 04:11:45] 2026-01-10 03:11:45,633 [wrapper] Test setup, not cleaning
[2026-01-10 04:11:45] 2026-01-10 03:11:45,634 [wrapper] apfmon messages muted
[2026-01-10 04:11:45] 2026-01-10 03:11:45,636 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:11:45] 2026-01-10 03:11:45,637 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:11:45]  *** Error codes and diagnostics ***
[2026-01-10 04:11:45]     "exeErrorCode": 0,
[2026-01-10 04:11:45]     "exeErrorDiag": "",
[2026-01-10 04:11:45]     "pilotErrorCode": 0,
[2026-01-10 04:11:45]     "pilotErrorDiag": "",
[2026-01-10 04:11:45]  *** Listing of results directory ***
[2026-01-10 04:11:45] total 778060
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 04:11:45] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:13 runpilot2-wrapper.sh
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:13 queuedata.json
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user       100 Jan  9 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:11:45] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan  9 23:54 run_atlas
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user       105 Jan  9 23:54 job.xml
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 01:34 start_atlas.sh
[2026-01-10 04:11:45] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 01:34 shared
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user    592604 Jan 10 01:34 input.tar.gz
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      6391 Jan 10 01:34 init_data.xml
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user 392494414 Jan 10 01:34 EVNT.47962006._000057.pool.root.1
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user         0 Jan 10 01:34 boinc_setup_complete
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      8192 Jan 10 01:34 boinc_mmap_file
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user         0 Jan 10 01:34 boinc_lockfile
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      2891 Jan 10 01:34 pandaJob.out
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user    989374 Jan 10 01:34 agis_schedconf.cvmfs.json
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user   1516240 Jan 10 01:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:11:45] drwx------ 5 mf493845 unix-user       440 Jan 10 01:34 pilot3
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user 394985302 Jan 10 04:10 HITS.47962010._000601.pool.root.1
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      1023 Jan 10 04:10 memory_monitor_summary.json
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user        95 Jan 10 04:10 pilot_heartbeat.json
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user   1351180 Jan 10 04:10 log.47962010._000601.job.log.tgz.1
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      8577 Jan 10 04:10 heartbeat.json
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      4907 Jan 10 04:11 pilotlog.txt
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user   1332784 Jan 10 04:11 log.47962010._000601.job.log.1
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user       353 Jan 10 04:11 output.list
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user       620 Jan 10 04:11 runtime_log
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user   2703360 Jan 10 04:11 result.tar.gz
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user      9220 Jan 10 04:11 runtime_log.err
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user       648 Jan 10 04:11 EPlKDm4rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwQmKDmt9zqsm.diag
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user     21815 Jan 10 04:11 stderr.txt
[2026-01-10 04:11:45] HITS file was successfully produced:
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user 394985302 Jan 10 04:10 shared/HITS.pool.root.1
[2026-01-10 04:11:45]  *** Contents of shared directory: ***
[2026-01-10 04:11:45] total 772260
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 01:34 start_atlas.sh
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user    592604 Jan 10 01:34 input.tar.gz
[2026-01-10 04:11:45] -rw-r--r-- 2 mf493845 unix-user 392494414 Jan 10 01:34 ATLAS.root_0
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user 394985302 Jan 10 04:10 HITS.pool.root.1
[2026-01-10 04:11:45] -rw------- 1 mf493845 unix-user   2703360 Jan 10 04:11 result.tar.gz
04:11:47 (21576): run_atlas exited; CPU time 69510.838813
04:11:47 (21576): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN