Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:40 (20488): wrapper (7.7.26015): starting
04:33:40 (20488): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:33:40] Arguments: --nthreads 8
[2026-01-10 04:33:40] Threads: 8
[2026-01-10 04:33:40] Checking for CVMFS
[2026-01-10 04:33:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:33:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:33:43] 2.11.2.0 28971 36321 128296 154966 0 62 19889494 25165825 899 130560 0 18267526 99.841 10223182 4088 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 04:33:43] CVMFS is ok
[2026-01-10 04:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:33:43] Checking for apptainer binary...
[2026-01-10 04:33:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:33:43] Running /usr/bin/apptainer --version
[2026-01-10 04:33:43] apptainer version 1.3.2-1.el7
[2026-01-10 04:33:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:33:50] cg-vwn489.simple-grid.lan
[2026-01-10 04:33:50] apptainer works
[2026-01-10 04:33:50] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:33:50] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:33:50] Starting ATLAS job with PandaID=6963375917
[2026-01-10 04:33:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:28:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:28:52] 2026-01-11 03:27:28,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:28:52] 2026-01-11 03:27:29,114 | INFO     | time since job start (85757s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:30,739 | INFO     | monitor loop #5816: job 0:6963375917 is in state 'finished'
[2026-01-11 04:28:52] 2026-01-11 03:27:30,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:28:52] 2026-01-11 03:27:31,123 | INFO     | time since job start (85759s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:33,130 | INFO     | time since job start (85761s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:33,244 | INFO     | monitor loop #5817: job 0:6963375917 is in state 'finished'
[2026-01-11 04:28:52] 2026-01-11 03:27:33,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:28:52] 2026-01-11 03:27:35,144 | INFO     | time since job start (85763s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:35,749 | INFO     | monitor loop #5818: job 0:6963375917 is in state 'finished'
[2026-01-11 04:28:52] 2026-01-11 03:27:35,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:28:52] 2026-01-11 03:27:36,304 | INFO     | PID=24235 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 04:28:52] 2026-01-11 03:27:36,305 | INFO     | .. there are 2 such processes running
[2026-01-11 04:28:52] 2026-01-11 03:27:37,305 | INFO     | time since job start (85765s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:38,254 | INFO     | monitor loop #5819: job 0:6963375917 is in state 'finished'
[2026-01-11 04:28:52] 2026-01-11 03:27:38,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:28:52] 2026-01-11 03:27:39,313 | INFO     | time since job start (85767s) is within the limit (349056.0s)
[2026-01-11 04:28:52] 2026-01-11 03:27:39,926 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 04:28:52] 2026-01-11 03:27:39,927 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-11 04:28:52] 2026-01-11 03:27:39,929 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963375917/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:28:52] 2026-01-11 03:27:39,930 | INFO     | extracted standard info from prmon json
[2026-01-11 04:28:52] 2026-01-11 03:27:39,930 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:28:52] 2026-01-11 03:27:39,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:28:52] 2026-01-11 03:27:39,971 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:28:52] 2026-01-11 03:27:39,973 | INFO     | sum of square deviations: 841784887807.9888
[2026-01-11 04:28:52] 2026-01-11 03:27:40,065 | INFO     | sum of deviations: 4086272605994.2153
[2026-01-11 04:28:52] 2026-01-11 03:27:40,065 | INFO     | mean x: 1768059384.0028675
[2026-01-11 04:28:52] 2026-01-11 03:27:40,065 | INFO     | mean y: 2796347.4444444445
[2026-01-11 04:28:52] 2026-01-11 03:27:40,065 | INFO     | intersect: -8579886391.652074
[2026-01-11 04:28:52] 2026-01-11 03:27:40,067 | INFO     | chi2: 33.10826164566527
[2026-01-11 04:28:52] 2026-01-11 03:27:40,069 | INFO     | sum of square deviations: 832766270975.4406
[2026-01-11 04:28:52] 2026-01-11 03:27:40,148 | INFO     | sum of deviations: 4540617509784.001
[2026-01-11 04:28:52] 2026-01-11 03:27:40,148 | INFO     | mean x: 1768059231.5064747
[2026-01-11 04:28:52] 2026-01-11 03:27:40,148 | INFO     | mean y: 2804029.3323741006
[2026-01-11 04:28:52] 2026-01-11 03:27:40,149 | INFO     | intersect: -9637452768.664555
[2026-01-11 04:28:52] 2026-01-11 03:27:40,150 | INFO     | chi2: 29.88116229257812
[2026-01-11 04:28:52] 2026-01-11 03:27:40,150 | INFO     | current chi2=29.88116229257812 (change=9.747112027881604 %)
[2026-01-11 04:28:52] 2026-01-11 03:27:40,150 | INFO     | right removable region: 1389
[2026-01-11 04:28:52] 2026-01-11 03:27:40,152 | INFO     | sum of square deviations: 832765417585.4407
[2026-01-11 04:28:52] 2026-01-11 03:27:40,216 | INFO     | sum of deviations: 3492836921268.7236
[2026-01-11 04:28:52] 2026-01-11 03:27:40,216 | INFO     | mean x: 1768059536.5064747
[2026-01-11 04:28:52] 2026-01-11 03:27:40,216 | INFO     | mean y: 2806381.4194244603
[2026-01-11 04:28:52] 2026-01-11 03:27:40,216 | INFO     | intersect: -7412899767.878591
[2026-01-11 04:28:52] 2026-01-11 03:27:40,218 | INFO     | chi2: 27.946767997919363
[2026-01-11 04:28:52] 2026-01-11 03:27:40,218 | INFO     | current chi2=27.946767997919363 (change=15.589745251459567 %)
[2026-01-11 04:28:52] 2026-01-11 03:27:40,218 | INFO     | left removable region: 10
[2026-01-11 04:28:52] 2026-01-11 03:27:40,220 | INFO     | sum of square deviations: 813150856075.7102
[2026-01-11 04:28:52] 2026-01-11 03:27:40,284 | INFO     | sum of deviations: 3495210448565.304
[2026-01-11 04:28:52] 2026-01-11 03:27:40,285 | INFO     | mean x: 1768059506.0145032
[2026-01-11 04:28:52] 2026-01-11 03:27:40,285 | INFO     | mean y: 2825458.2842639596
[2026-01-11 04:28:52] 2026-01-11 03:27:40,285 | INFO     | intersect: -7596920656.392056
[2026-01-11 04:28:52] 2026-01-11 03:27:40,286 | INFO     | chi2: 19.41983046972142
[2026-01-11 04:28:52] 2026-01-11 03:27:40,287 | INFO     | current memory leak: 4.30 B/s (using 1379 data points, chi2=19.42)
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | could have reported an average CPU frequency of 2249 MHz (47 samples)
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | ..............................
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | . Timing measurements:
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | . get job = 0 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | . initial setup = 11 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,288 | INFO     | . payload setup = 190 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,289 | INFO     | . stage-in = 0 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,289 | INFO     | . payload execution = 85239 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,289 | INFO     | . stage-out = 9 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,289 | INFO     | . log creation = 2 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,289 | INFO     | ..............................
[2026-01-11 04:28:52] 2026-01-11 03:27:40,410 | INFO     | 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,410 | INFO     | job summary report
[2026-01-11 04:28:52] 2026-01-11 03:27:40,410 | INFO     | --------------------------------------------------
[2026-01-11 04:28:52] 2026-01-11 03:27:40,410 | INFO     | PanDA job id: 6963375917
[2026-01-11 04:28:52] 2026-01-11 03:27:40,410 | INFO     | task id: 47962010
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | errors: (none)
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | pilot state: finished 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | transexitcode: 0
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | exeerrorcode: 0
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | exeerrordiag: 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | exitcode: 0
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | exitmsg: OK
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | cpuconsumptiontime: 318487 s
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | nevents: 900
[2026-01-11 04:28:52] 2026-01-11 03:27:40,411 | INFO     | neventsw: 0
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | pid: 30746
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | pgrp: 30746
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | corecount: 8
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | event service: False
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | sizes: {0: 2284394, 1: 2284649, 12: 2284649, 23: 2284677, 34: 2284705, 44: 2284733, 55: 2284889, 66: 2284917, 77: 2284945, 87: 2285001, 98: 2285029, 106: 2285599, 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | --------------------------------------------------
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | 
[2026-01-11 04:28:52] 2026-01-11 03:27:40,412 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-11 04:28:52] 2026-01-11 03:27:41,071 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,071 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,071 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,071 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:28:52] 2026-01-11 03:27:41,073 | INFO     | job 6963375917 has completed (purged errors)
[2026-01-11 04:28:52] 2026-01-11 03:27:41,074 | INFO     | overall cleanup function is called
[2026-01-11 04:28:52] 2026-01-11 03:27:42,089 | INFO     | --- collectZombieJob: --- 10, [30746]
[2026-01-11 04:28:52] 2026-01-11 03:27:42,089 | INFO     | zombie collector waiting for pid 30746
[2026-01-11 04:28:52] 2026-01-11 03:27:42,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:28:52] 2026-01-11 03:27:42,090 | INFO     | collected zombie processes
[2026-01-11 04:28:52] 2026-01-11 03:27:42,090 | INFO     | will attempt to kill all subprocesses of pid=30746
[2026-01-11 04:28:52] 2026-01-11 03:27:42,158 | INFO     | process IDs to be killed: [30746] (in reverse order)
[2026-01-11 04:28:52] 2026-01-11 03:27:43,137 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:28:52] 2026-01-11 03:27:43,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:28:52] 2026-01-11 03:27:43,139 | INFO     | did not find any defunct processes belonging to 30746
[2026-01-11 04:28:52] 2026-01-11 03:27:43,141 | INFO     | did not find any defunct processes belonging to 30746
[2026-01-11 04:28:52] 2026-01-11 03:27:43,141 | INFO     | ready for new job
[2026-01-11 04:28:52] 2026-01-11 03:27:43,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:28:52] 2026-01-11 03:27:43,146 | INFO     | ***************************************
[2026-01-11 04:28:52] 2026-01-11 03:27:43,146 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:28:52] 2026-01-11 03:27:43,147 | INFO     | ***************************************
[2026-01-11 04:28:52] 2026-01-11 03:27:43,147 | INFO     | 
[2026-01-11 04:28:52] 2026-01-11 03:27:43,147 | INFO     | pilot is running in a VM
[2026-01-11 04:28:52] 2026-01-11 03:27:43,147 | INFO     | architecture information:
[2026-01-11 04:28:52] 2026-01-11 03:27:43,162 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:28:52] 2026-01-11 03:27:43,465 | INFO     | cat /etc/os-release:
[2026-01-11 04:28:52] NAME="CentOS Linux"
[2026-01-11 04:28:52] VERSION="7 (Core)"
[2026-01-11 04:28:52] ID="centos"
[2026-01-11 04:28:52] ID_LIKE="rhel fedora"
[2026-01-11 04:28:52] VERSION_ID="7"
[2026-01-11 04:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:28:52] ANSI_COLOR="0;31"
[2026-01-11 04:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:28:52] HOME_URL="https://www.centos.org/"
[2026-01-11 04:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:28:52] 
[2026-01-11 04:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:28:52] 
[2026-01-11 04:28:52] 2026-01-11 03:27:43,465 | INFO     | ***************************************
[2026-01-11 04:28:52] 2026-01-11 03:27:43,968 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-11 04:28:52] 2026-01-11 03:27:44,192 | INFO     | sufficient remaining disk space (496532193280 B)
[2026-01-11 04:28:52] 2026-01-11 03:27:44,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:28:52] 2026-01-11 03:27:44,193 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:28:52] 2026-01-11 03:27:44,193 | INFO     | update_server=False
[2026-01-11 04:28:52] 2026-01-11 03:27:44,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:28:52] 2026-01-11 03:27:44,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:28:52] 2026-01-11 03:27:44,293 | INFO     | aborting loop
[2026-01-11 04:28:52] 2026-01-11 03:27:44,387 | INFO     | all job control threads have been joined
[2026-01-11 04:28:52] 2026-01-11 03:27:44,817 | INFO     | all data control threads have been joined
[2026-01-11 04:28:52] 2026-01-11 03:27:45,167 | INFO     | all payload control threads have been joined
[2026-01-11 04:28:52] 2026-01-11 03:27:45,198 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:28:52] 2026-01-11 03:27:45,298 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,393 | INFO     | [job] control thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:28:52] 2026-01-11 03:27:45,515 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:28:52] 2026-01-11 03:27:45,823 | INFO     | [data] control thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,826 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:45,836 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,173 | INFO     | [payload] control thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,227 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,302 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,333 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,387 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,429 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:46,638 | INFO     | [job] validate thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:47,690 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:27:49,233 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:28:52] 2026-01-11 03:28:12,470 | INFO     | PID=24235 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 04:28:52] 2026-01-11 03:28:12,470 | INFO     | .. there are 2 such processes running
[2026-01-11 04:28:52] 2026-01-11 03:28:12,470 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:28:52] 2026-01-11 03:28:12,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:28:52] 2026-01-11 03:28:12,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:28:52] 2026-01-11 03:28:41,297 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:28:52] 2026-01-11 03:28:41,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053199386432)>', '<ExcThread(monitor, started 140052617217792)>']
[2026-01-11 04:28:52] 2026-01-11 03:28:42,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:28:52] 2026-01-11 03:28:42,650 | INFO     | [monitor] control thread has ended
[2026-01-11 04:28:52] 2026-01-11 03:28:46,990 | INFO     | all workflow threads have been joined
[2026-01-11 04:28:52] 2026-01-11 03:28:46,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:28:52] 2026-01-11 03:28:46,991 | INFO     | traces error code: 0
[2026-01-11 04:28:52] 2026-01-11 03:28:46,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:28:52] 2026-01-11 03:28:47,457 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:28:52] 2026-01-11 03:28:47,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:28:52] 2026-01-11 03:28:47,660 [wrapper] pilotpid: 24235
[2026-01-11 04:28:52] 2026-01-11 03:28:47,754 [wrapper] Pilot exit status: 0
[2026-01-11 04:28:52] 2026-01-11 03:28:48,173 [wrapper] pandaids: 6963375917
[2026-01-11 04:28:52] 2026-01-11 03:28:49,251 [wrapper] cleanup supervisor_pilot  3322 24236
[2026-01-11 04:28:52] 2026-01-11 03:28:49,376 [wrapper] Test setup, not cleaning
[2026-01-11 04:28:52] 2026-01-11 03:28:49,484 [wrapper] apfmon messages muted
[2026-01-11 04:28:52] 2026-01-11 03:28:49,603 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:28:52] 2026-01-11 03:28:49,692 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:28:52]  *** Error codes and diagnostics ***
[2026-01-11 04:28:52]     "exeErrorCode": 0,
[2026-01-11 04:28:52]     "exeErrorDiag": "",
[2026-01-11 04:28:52]     "pilotErrorCode": 0,
[2026-01-11 04:28:52]     "pilotErrorDiag": "",
[2026-01-11 04:28:52]  *** Listing of results directory ***
[2026-01-11 04:28:52] total 1183280
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-11 04:28:52] -rwx------. 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc       100 Jan 10 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:28:52] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 04:33 run_atlas
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc       105 Jan 10 04:33 job.xml
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc      6391 Jan 10 04:33 init_data.xml
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc 393071051 Jan 10 04:33 EVNT.47962006._000086.pool.root.1
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc     15847 Jan 10 04:33 start_atlas.sh
[2026-01-11 04:28:52] drwxrwx--x. 2 boinc boinc        68 Jan 10 04:33 shared
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc    592610 Jan 10 04:33 input.tar.gz
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc         0 Jan 10 04:33 boinc_lockfile
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc      2891 Jan 10 04:33 pandaJob.out
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc    989374 Jan 10 04:38 agis_schedconf.cvmfs.json
[2026-01-11 04:28:52] drwx------. 5 boinc boinc      4096 Jan 10 04:38 pilot3
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc       533 Jan 11 04:00 boinc_task_state.xml
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc 786702691 Jan 11 04:24 HITS.47962010._001078.pool.root.1
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc      1031 Jan 11 04:25 memory_monitor_summary.json
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc   1516240 Jan 11 04:25 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc   2461870 Jan 11 04:25 log.47962010._001078.job.log.tgz.1
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc        95 Jan 11 04:27 pilot_heartbeat.json
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc      7951 Jan 11 04:27 heartbeat.json
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc      8192 Jan 11 04:28 boinc_mmap_file
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc        29 Jan 11 04:28 wrapper_checkpoint.txt
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc      4885 Jan 11 04:28 pilotlog.txt
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc  11537530 Jan 11 04:28 log.47962010._001078.job.log.1
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc       353 Jan 11 04:28 output.list
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc       620 Jan 11 04:28 runtime_log
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc  14018560 Jan 11 04:28 result.tar.gz
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc      8833 Jan 11 04:28 runtime_log.err
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc       662 Jan 11 04:28 CBKNDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCHhKDm1TApGo.diag
[2026-01-11 04:28:52] -rw-r--r--. 1 boinc boinc     21421 Jan 11 04:28 stderr.txt
[2026-01-11 04:28:52] HITS file was successfully produced:
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc 786702691 Jan 11 04:24 shared/HITS.pool.root.1
[2026-01-11 04:28:52]  *** Contents of shared directory: ***
[2026-01-11 04:28:52] total 1166416
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc 393071051 Jan 10 04:33 ATLAS.root_0
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc     15847 Jan 10 04:33 start_atlas.sh
[2026-01-11 04:28:52] -rw-r--r--. 2 boinc boinc    592610 Jan 10 04:33 input.tar.gz
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc 786702691 Jan 11 04:24 HITS.pool.root.1
[2026-01-11 04:28:52] -rw-------. 1 boinc boinc  14018560 Jan 11 04:28 result.tar.gz
04:28:53 (20488): run_atlas exited; CPU time 318832.973457
04:28:53 (20488): called boinc_finish(0)

</stderr_txt>
]]>

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