Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:28 (3985764): wrapper (7.7.26015): starting
19:50:28 (3985764): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 19:50:28] Arguments: --nthreads 9
[2026-01-09 19:50:28] Threads: 9
[2026-01-09 19:50:28] Checking for CVMFS
[2026-01-09 19:50:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:50:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:50:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:50:29] 2.13.3.0 589311 17642 150320 154962 0 65 38155384 39288833 6850 16776704 0 7448678 99.584 10385319 50069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:50:29] CVMFS is ok
[2026-01-09 19:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:50:29] Further information can be found at the LHC@home message board.
[2026-01-09 19:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:50:29] Checking for apptainer binary...
[2026-01-09 19:50:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:50:29] Running /usr/bin/apptainer --version
[2026-01-09 19:50:29] apptainer version 1.4.5-2.el9
[2026-01-09 19:50:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:50:30] c-210-23.aglt2.org
[2026-01-09 19:50:30] apptainer works
[2026-01-09 19:50:30] Set ATHENA_PROC_NUMBER=9
[2026-01-09 19:50:30] Set ATHENA_CORE_NUMBER=9
[2026-01-09 19:50:30] Starting ATLAS job with PandaID=6963170047
[2026-01-09 19:50:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:04:11]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:04:11] 2026-01-10 20:03:25,197 | INFO     | monitor loop #4340: job 0:6963170047 is in state 'finished'
[2026-01-10 15:04:11] 2026-01-10 20:03:25,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:04:11] 2026-01-10 20:03:25,576 | INFO     | time since job start (69147s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:27,583 | INFO     | time since job start (69149s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:27,704 | INFO     | monitor loop #4341: job 0:6963170047 is in state 'finished'
[2026-01-10 15:04:11] 2026-01-10 20:03:27,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:04:11] 2026-01-10 20:03:29,597 | INFO     | time since job start (69151s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:30,211 | INFO     | monitor loop #4342: job 0:6963170047 is in state 'finished'
[2026-01-10 15:04:11] 2026-01-10 20:03:30,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:04:11] 2026-01-10 20:03:31,606 | INFO     | time since job start (69153s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:32,753 | INFO     | monitor loop #4343: job 0:6963170047 is in state 'finished'
[2026-01-10 15:04:11] 2026-01-10 20:03:32,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:04:11] 2026-01-10 20:03:33,178 | INFO     | PID=3989499 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:04:11] 2026-01-10 20:03:33,178 | INFO     | .. there are 7 such processes running
[2026-01-10 15:04:11] 2026-01-10 20:03:34,179 | INFO     | time since job start (69156s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,271 | INFO     | monitor loop #4344: job 0:6963170047 is in state 'finished'
[2026-01-10 15:04:11] 2026-01-10 20:03:35,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,335 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:04:11] 2026-01-10 20:03:35,345 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.10255
[2026-01-10 15:04:11] 2026-01-10 20:03:35,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963170047/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,361 | INFO     | extracted standard info from prmon json
[2026-01-10 15:04:11] 2026-01-10 20:03:35,361 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:04:11] 2026-01-10 20:03:35,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:04:11] 2026-01-10 20:03:35,407 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:04:11] 2026-01-10 20:03:35,409 | INFO     | sum of square deviations: 449858659432.1082
[2026-01-10 15:04:11] 2026-01-10 20:03:35,476 | INFO     | sum of deviations: 277128221226.87164
[2026-01-10 15:04:11] 2026-01-10 20:03:35,476 | INFO     | mean x: 1768040830.1651943
[2026-01-10 15:04:11] 2026-01-10 20:03:35,476 | INFO     | mean y: 2932880.621024735
[2026-01-10 15:04:11] 2026-01-10 20:03:35,477 | INFO     | intersect: -1086240352.00874
[2026-01-10 15:04:11] 2026-01-10 20:03:35,478 | INFO     | chi2: 20.720247975796276
[2026-01-10 15:04:11] 2026-01-10 20:03:35,484 | INFO     | sum of square deviations: 443926266469.1772
[2026-01-10 15:04:11] 2026-01-10 20:03:35,596 | INFO     | sum of deviations: 691318001748.857
[2026-01-10 15:04:11] 2026-01-10 20:03:35,600 | INFO     | mean x: 1768040677.6850045
[2026-01-10 15:04:11] 2026-01-10 20:03:35,600 | INFO     | mean y: 2943525.2812777283
[2026-01-10 15:04:11] 2026-01-10 20:03:35,600 | INFO     | intersect: -2750392874.543484
[2026-01-10 15:04:11] 2026-01-10 20:03:35,610 | INFO     | chi2: 16.933853314580574
[2026-01-10 15:04:11] 2026-01-10 20:03:35,611 | INFO     | current chi2=16.933853314580574 (change=18.273886806946823 %)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,611 | INFO     | right removable region: 1126
[2026-01-10 15:04:11] 2026-01-10 20:03:35,612 | INFO     | sum of square deviations: 443923114102.8056
[2026-01-10 15:04:11] 2026-01-10 20:03:35,700 | INFO     | sum of deviations: -125123813307.37462
[2026-01-10 15:04:11] 2026-01-10 20:03:35,701 | INFO     | mean x: 1768040982.6858919
[2026-01-10 15:04:11] 2026-01-10 20:03:35,701 | INFO     | mean y: 2943211.863354037
[2026-01-10 15:04:11] 2026-01-10 20:03:35,701 | INFO     | intersect: 501281826.8383442
[2026-01-10 15:04:11] 2026-01-10 20:03:35,711 | INFO     | chi2: 17.570836696694226
[2026-01-10 15:04:11] 2026-01-10 20:03:35,711 | INFO     | current chi2=17.570836696694226 (change=15.199679476717359 %)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,711 | INFO     | left removable region: 10
[2026-01-10 15:04:11] 2026-01-10 20:03:35,713 | INFO     | sum of square deviations: 431053652358.3326
[2026-01-10 15:04:11] 2026-01-10 20:03:35,794 | INFO     | sum of deviations: 276239704118.4318
[2026-01-10 15:04:11] 2026-01-10 20:03:35,795 | INFO     | mean x: 1768040952.221326
[2026-01-10 15:04:11] 2026-01-10 20:03:35,795 | INFO     | mean y: 2958920.0994623657
[2026-01-10 15:04:11] 2026-01-10 20:03:35,795 | INFO     | intersect: -1130085903.5293205
[2026-01-10 15:04:11] 2026-01-10 20:03:35,797 | INFO     | chi2: 12.65258704895855
[2026-01-10 15:04:11] 2026-01-10 20:03:35,797 | INFO     | current memory leak: 0.64 B/s (using 1116 data points, chi2=12.65)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,798 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2026-01-10 15:04:11] 2026-01-10 20:03:35,798 | INFO     | ..............................
[2026-01-10 15:04:11] 2026-01-10 20:03:35,798 | INFO     | . Timing measurements:
[2026-01-10 15:04:11] 2026-01-10 20:03:35,798 | INFO     | . get job = 0 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,798 | INFO     | . initial setup = 3 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | . payload setup = 25 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | . stage-in = 0 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | . payload execution = 69051 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | . stage-out = 4 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | . log creation = 1 s
[2026-01-10 15:04:11] 2026-01-10 20:03:35,799 | INFO     | ..............................
[2026-01-10 15:04:11] 2026-01-10 20:03:36,205 | INFO     | time since job start (69158s) is within the limit (349056.0s)
[2026-01-10 15:04:11] 2026-01-10 20:03:36,492 | INFO     | 
[2026-01-10 15:04:11] 2026-01-10 20:03:36,492 | INFO     | job summary report
[2026-01-10 15:04:11] 2026-01-10 20:03:36,492 | INFO     | --------------------------------------------------
[2026-01-10 15:04:11] 2026-01-10 20:03:36,492 | INFO     | PanDA job id: 6963170047
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | task id: 47962010
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | errors: (none)
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | pilot state: finished 
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | transexitcode: 0
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | exeerrorcode: 0
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | exeerrordiag: 
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | exitcode: 0
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | exitmsg: OK
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | cpuconsumptiontime: 159548 s
[2026-01-10 15:04:11] 2026-01-10 20:03:36,493 | INFO     | nevents: 450
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | neventsw: 0
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | pid: 3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | pgrp: 3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | corecount: 9
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | event service: False
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | sizes: {0: 2284393, 1: 2284648, 2: 2284648, 12: 2284676, 17: 2284966, 23: 2284994, 69081: 2343118, 69087: 2352112, 69091: 2352168, 69124: 2352510}
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | --------------------------------------------------
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | 
[2026-01-10 15:04:11] 2026-01-10 20:03:36,494 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 15:04:11] 2026-01-10 20:03:36,551 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,553 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:04:11] 2026-01-10 20:03:36,554 | INFO     | job 6963170047 has completed (purged errors)
[2026-01-10 15:04:11] 2026-01-10 20:03:36,554 | INFO     | overall cleanup function is called
[2026-01-10 15:04:11] 2026-01-10 20:03:37,578 | INFO     | --- collectZombieJob: --- 10, [3996570]
[2026-01-10 15:04:11] 2026-01-10 20:03:37,578 | INFO     | zombie collector waiting for pid 3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:37,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:04:11] 2026-01-10 20:03:37,578 | INFO     | collected zombie processes
[2026-01-10 15:04:11] 2026-01-10 20:03:37,579 | INFO     | will attempt to kill all subprocesses of pid=3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:38,034 | INFO     | process IDs to be killed: [3996570] (in reverse order)
[2026-01-10 15:04:11] 2026-01-10 20:03:38,801 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:04:11] 2026-01-10 20:03:38,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:04:11] 2026-01-10 20:03:38,841 | INFO     | did not find any defunct processes belonging to 3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:38,856 | INFO     | did not find any defunct processes belonging to 3996570
[2026-01-10 15:04:11] 2026-01-10 20:03:38,856 | INFO     | ready for new job
[2026-01-10 15:04:11] 2026-01-10 20:03:38,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:04:11] 2026-01-10 20:03:38,865 | INFO     | ***************************************
[2026-01-10 15:04:11] 2026-01-10 20:03:38,865 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:04:11] 2026-01-10 20:03:38,865 | INFO     | ***************************************
[2026-01-10 15:04:11] 2026-01-10 20:03:38,865 | INFO     | 
[2026-01-10 15:04:11] 2026-01-10 20:03:38,871 | INFO     | architecture information:
[2026-01-10 15:04:11] 2026-01-10 20:03:38,872 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:04:11] 2026-01-10 20:03:38,917 | INFO     | cat /etc/os-release:
[2026-01-10 15:04:11] NAME="CentOS Linux"
[2026-01-10 15:04:11] VERSION="7 (Core)"
[2026-01-10 15:04:11] ID="centos"
[2026-01-10 15:04:11] ID_LIKE="rhel fedora"
[2026-01-10 15:04:11] VERSION_ID="7"
[2026-01-10 15:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:04:11] ANSI_COLOR="0;31"
[2026-01-10 15:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:04:11] HOME_URL="https://www.centos.org/"
[2026-01-10 15:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:04:11] 
[2026-01-10 15:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:04:11] 
[2026-01-10 15:04:11] 2026-01-10 20:03:38,918 | INFO     | ***************************************
[2026-01-10 15:04:11] 2026-01-10 20:03:39,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 15:04:11] 2026-01-10 20:03:39,489 | INFO     | sufficient remaining disk space (52699332608 B)
[2026-01-10 15:04:11] 2026-01-10 20:03:39,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:04:11] 2026-01-10 20:03:39,489 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:04:11] 2026-01-10 20:03:39,490 | INFO     | update_server=False
[2026-01-10 15:04:11] 2026-01-10 20:03:39,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:04:11] 2026-01-10 20:03:39,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:04:11] 2026-01-10 20:03:39,490 | INFO     | aborting loop
[2026-01-10 15:04:11] 2026-01-10 20:03:39,566 | INFO     | all payload control threads have been joined
[2026-01-10 15:04:11] 2026-01-10 20:03:39,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:04:11] 2026-01-10 20:03:40,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:04:11] 2026-01-10 20:03:40,495 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,496 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,572 | INFO     | [payload] control thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,591 | INFO     | all data control threads have been joined
[2026-01-10 15:04:11] 2026-01-10 20:03:40,610 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,668 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,742 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:40,750 | INFO     | all job control threads have been joined
[2026-01-10 15:04:11] 2026-01-10 20:03:41,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:04:11] 2026-01-10 20:03:41,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,467 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,597 | INFO     | [data] control thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,632 | INFO     | [job] validate thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,758 | INFO     | [job] control thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,886 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:41,972 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:42,119 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:03:44,346 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:04:11] 2026-01-10 20:04:03,323 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:04:11] 2026-01-10 20:04:03,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100020066112)>', '<ExcThread(monitor, started 140099677316864)>']
[2026-01-10 15:04:11] 2026-01-10 20:04:08,721 | INFO     | all workflow threads have been joined
[2026-01-10 15:04:11] 2026-01-10 20:04:08,721 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:04:11] 2026-01-10 20:04:08,722 | INFO     | traces error code: 0
[2026-01-10 15:04:11] 2026-01-10 20:04:08,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:04:11] 2026-01-10 20:04:09,881 | INFO     | PID=3989499 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:04:11] 2026-01-10 20:04:09,881 | INFO     | .. there are 7 such processes running
[2026-01-10 15:04:11] 2026-01-10 20:04:09,882 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:04:11] 2026-01-10 20:04:09,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:04:11] 2026-01-10 20:04:09,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:04:11] 2026-01-10 20:04:09,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:04:11] 2026-01-10 20:04:09,883 | INFO     | [monitor] control thread has ended
[2026-01-10 15:04:11] 2026-01-10 20:04:10,419 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:04:11] 2026-01-10 20:04:10,448 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:04:11] 2026-01-10 20:04:10,478 [wrapper] pilotpid: 3989499
[2026-01-10 15:04:11] 2026-01-10 20:04:10,494 [wrapper] Pilot exit status: 0
[2026-01-10 15:04:11] 2026-01-10 20:04:10,617 [wrapper] pandaids: 6963170047
[2026-01-10 15:04:11] 2026-01-10 20:04:10,831 [wrapper] cleanup supervisor_pilot 1359243 3989500
[2026-01-10 15:04:11] 2026-01-10 20:04:10,847 [wrapper] Test setup, not cleaning
[2026-01-10 15:04:11] 2026-01-10 20:04:10,886 [wrapper] apfmon messages muted
[2026-01-10 15:04:11] 2026-01-10 20:04:10,906 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:04:11] 2026-01-10 20:04:10,922 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:04:11]  *** Error codes and diagnostics ***
[2026-01-10 15:04:11]     "exeErrorCode": 0,
[2026-01-10 15:04:11]     "exeErrorDiag": "",
[2026-01-10 15:04:11]     "pilotErrorCode": 0,
[2026-01-10 15:04:11]     "pilotErrorDiag": "",
[2026-01-10 15:04:11]  *** Listing of results directory ***
[2026-01-10 15:04:11] total 809928
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 15:04:11] -rwx------. 1 boincer umatlas     36322 Jan  9 02:13 runpilot2-wrapper.sh
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:04:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:50 run_atlas
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:50 job.xml
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 19:50 EVNT.47962006._000055.pool.root.1
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:50 start_atlas.sh
[2026-01-10 15:04:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:50 shared
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 19:50 input.tar.gz
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:50 boinc_lockfile
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 19:50 pandaJob.out
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas        57 Jan  9 19:50 setup.sh.local
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas    989374 Jan  9 19:50 agis_schedconf.cvmfs.json
[2026-01-10 15:04:11] drwx------. 5 boincer umatlas      4096 Jan  9 19:50 pilot3
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas       533 Jan 10 13:52 boinc_task_state.xml
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas 413628286 Jan 10 15:00 HITS.47962010._000547.pool.root.1
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas      6658 Jan 10 15:01 init_data.xml
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas      1051 Jan 10 15:02 memory_monitor_summary.json
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas   1516240 Jan 10 15:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas   2213677 Jan 10 15:02 log.47962010._000547.job.log.tgz.1
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas      8609 Jan 10 15:03 heartbeat.json
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 15:03 boinc_mmap_file
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas        29 Jan 10 15:04 wrapper_checkpoint.txt
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas       822 Jan 10 15:04 pilotlog.txt
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas        95 Jan 10 15:04 pilot_heartbeat.json
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas   8966167 Jan 10 15:04 log.47962010._000547.job.log.1
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas       353 Jan 10 15:04 output.list
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas       620 Jan 10 15:04 runtime_log
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas  11202560 Jan 10 15:04 result.tar.gz
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 15:04 runtime_log.err
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas       660 Jan 10 15:04 3qjNDm3rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZQmKDm4DzeIo.diag
[2026-01-10 15:04:11] -rw-r--r--. 1 boincer umatlas     21764 Jan 10 15:04 stderr.txt
[2026-01-10 15:04:11] HITS file was successfully produced:
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas 413628286 Jan 10 15:00 shared/HITS.pool.root.1
[2026-01-10 15:04:11]  *** Contents of shared directory: ***
[2026-01-10 15:04:11] total 795808
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 19:50 ATLAS.root_0
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:50 start_atlas.sh
[2026-01-10 15:04:11] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 19:50 input.tar.gz
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas 413628286 Jan 10 15:00 HITS.pool.root.1
[2026-01-10 15:04:11] -rw-------. 1 boincer umatlas  11202560 Jan 10 15:04 result.tar.gz
15:04:13 (3985764): run_atlas exited; CPU time 160492.175408
15:04:13 (3985764): called boinc_finish(0)

</stderr_txt>
]]>

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