Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
14:58:26 (3132288): wrapper (7.7.26015): starting
14:58:26 (3132288): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 14:58:26] Arguments: --nthreads 12
[2026-01-10 14:58:26] Threads: 12
[2026-01-10 14:58:26] Checking for CVMFS
[2026-01-10 14:58:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:58:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:58:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:58:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:58:26] 2.12.7.0 2330541 3661 66876 154981 3 56 3279486 4096001 0 130560 0 2166606 99.958 137527 41 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 14:58:26] CVMFS is ok
[2026-01-10 14:58:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:58:26] Checking for apptainer binary...
[2026-01-10 14:58:26] apptainer is not installed, using version from CVMFS
[2026-01-10 14:58:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:58:27] lithium
[2026-01-10 14:58:27] apptainer works
[2026-01-10 14:58:27] Set ATHENA_PROC_NUMBER=12
[2026-01-10 14:58:27] Set ATHENA_CORE_NUMBER=12
[2026-01-10 14:58:27] Starting ATLAS job with PandaID=6963170045
[2026-01-10 14:58:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:22:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:22:13] 2026-01-10 19:21:22,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:22:13] 2026-01-10 19:21:23,246 | INFO     | time since job start (19368s) is within the limit (349056.0s)
[2026-01-10 20:22:13] 2026-01-10 19:21:24,803 | INFO     | monitor loop #1412: job 0:6963170045 is in state 'finished'
[2026-01-10 20:22:13] 2026-01-10 19:21:24,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:22:13] 2026-01-10 19:21:25,252 | INFO     | time since job start (19370s) is within the limit (349056.0s)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,096 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 20:22:13] 2026-01-10 19:21:26,098 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2290.4825000000005
[2026-01-10 20:22:13] 2026-01-10 19:21:26,100 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6963170045/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,100 | INFO     | extracted standard info from prmon json
[2026-01-10 20:22:13] 2026-01-10 19:21:26,100 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:22:13] 2026-01-10 19:21:26,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:22:13] 2026-01-10 19:21:26,105 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:22:13] 2026-01-10 19:21:26,105 | INFO     | sum of square deviations: 9877592522.977953
[2026-01-10 20:22:13] 2026-01-10 19:21:26,107 | INFO     | sum of deviations: 210553725439.984
[2026-01-10 20:22:13] 2026-01-10 19:21:26,107 | INFO     | mean x: 1768063175.9432178
[2026-01-10 20:22:13] 2026-01-10 19:21:26,108 | INFO     | mean y: 3302597.3880126183
[2026-01-10 20:22:13] 2026-01-10 19:21:26,108 | INFO     | intersect: -37685262469.66535
[2026-01-10 20:22:13] 2026-01-10 19:21:26,108 | INFO     | chi2: 4.892993655601451
[2026-01-10 20:22:13] 2026-01-10 19:21:26,108 | INFO     | sum of square deviations: 9417619273.458334
[2026-01-10 20:22:13] 2026-01-10 19:21:26,110 | INFO     | sum of deviations: 310930134457.20844
[2026-01-10 20:22:13] 2026-01-10 19:21:26,110 | INFO     | mean x: 1768063023.4583333
[2026-01-10 20:22:13] 2026-01-10 19:21:26,111 | INFO     | mean y: 3335784.362179487
[2026-01-10 20:22:13] 2026-01-10 19:21:26,111 | INFO     | intersect: -58370660620.659325
[2026-01-10 20:22:13] 2026-01-10 19:21:26,111 | INFO     | chi2: 2.4346976203363204
[2026-01-10 20:22:13] 2026-01-10 19:21:26,111 | INFO     | current chi2=2.4346976203363204 (change=50.24114495735954 %)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,112 | INFO     | sum of square deviations: 8972101196.60586
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | sum of deviations: 316570336237.65137
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | mean x: 1768062870.9641693
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | mean y: 3337674.2410423453
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | intersect: -62380739955.44225
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | chi2: 2.3411585750800006
[2026-01-10 20:22:13] 2026-01-10 19:21:26,114 | INFO     | current chi2=2.3411585750800006 (change=3.841916321559418 %)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,115 | INFO     | right removable region: 306
[2026-01-10 20:22:13] 2026-01-10 19:21:26,115 | INFO     | sum of square deviations: 9417455977.371847
[2026-01-10 20:22:13] 2026-01-10 19:21:26,117 | INFO     | sum of deviations: 110815289226.11542
[2026-01-10 20:22:13] 2026-01-10 19:21:26,117 | INFO     | mean x: 1768063328.4551282
[2026-01-10 20:22:13] 2026-01-10 19:21:26,117 | INFO     | mean y: 3335532.8653846155
[2026-01-10 20:22:13] 2026-01-10 19:21:26,117 | INFO     | intersect: -20801481562.496452
[2026-01-10 20:22:13] 2026-01-10 19:21:26,118 | INFO     | chi2: 2.667112903554875
[2026-01-10 20:22:13] 2026-01-10 19:21:26,118 | INFO     | current chi2=2.667112903554875 (change=45.49118410358881 %)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,118 | INFO     | sum of square deviations: 8971907707.361582
[2026-01-10 20:22:13] 2026-01-10 19:21:26,120 | INFO     | sum of deviations: 89200030629.0618
[2026-01-10 20:22:13] 2026-01-10 19:21:26,120 | INFO     | mean x: 1768063480.9543974
[2026-01-10 20:22:13] 2026-01-10 19:21:26,120 | INFO     | mean y: 3342924.3615635177
[2026-01-10 20:22:13] 2026-01-10 19:21:26,120 | INFO     | intersect: -17575005159.385822
[2026-01-10 20:22:13] 2026-01-10 19:21:26,121 | INFO     | chi2: 2.6226589654853116
[2026-01-10 20:22:13] 2026-01-10 19:21:26,121 | INFO     | current chi2=2.6226589654853116 (change=1.666743766651669 %)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,121 | INFO     | left removable region: 20
[2026-01-10 20:22:13] 2026-01-10 19:21:26,121 | INFO     | sum of square deviations: 7253936183.328666
[2026-01-10 20:22:13] 2026-01-10 19:21:26,123 | INFO     | sum of deviations: 165013250880.37076
[2026-01-10 20:22:13] 2026-01-10 19:21:26,123 | INFO     | mean x: 1768063450.4755244
[2026-01-10 20:22:13] 2026-01-10 19:21:26,123 | INFO     | mean y: 3391354.695804196
[2026-01-10 20:22:13] 2026-01-10 19:21:26,123 | INFO     | intersect: -40216689212.9075
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | chi2: 0.01877429645247668
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | current memory leak: 22.75 B/s (using 286 data points, chi2=0.02)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | could have reported an average CPU frequency of 2783 MHz (14 samples)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | ..............................
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | . Timing measurements:
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | . get job = 0 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,124 | INFO     | . initial setup = 1 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | . payload setup = 5 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | . stage-in = 0 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | . payload execution = 19304 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | . stage-out = 1 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | . log creation = 0 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,125 | INFO     | ..............................
[2026-01-10 20:22:13] 2026-01-10 19:21:26,199 | INFO     | 
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | job summary report
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | --------------------------------------------------
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | PanDA job id: 6963170045
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | task id: 47962010
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | errors: (none)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | pilot state: finished 
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | transexitcode: 0
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | exeerrorcode: 0
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | exeerrordiag: 
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | exitcode: 0
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | exitmsg: OK
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | cpuconsumptiontime: 225955 s
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | nevents: 450
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | neventsw: 0
[2026-01-10 20:22:13] 2026-01-10 19:21:26,201 | INFO     | pid: 3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | pgrp: 3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | corecount: 12
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | event service: False
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | sizes: {0: 2284625, 3: 2284887, 11: 2284915, 19313: 2318880, 19315: 2327888, 19316: 2327944, 19356: 2328318}
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | --------------------------------------------------
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | 
[2026-01-10 20:22:13] 2026-01-10 19:21:26,202 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,220 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:22:13] 2026-01-10 19:21:26,220 | INFO     | job 6963170045 has completed (purged errors)
[2026-01-10 20:22:13] 2026-01-10 19:21:26,220 | INFO     | overall cleanup function is called
[2026-01-10 20:22:13] 2026-01-10 19:21:27,233 | INFO     | --- collectZombieJob: --- 10, [3142705]
[2026-01-10 20:22:13] 2026-01-10 19:21:27,233 | INFO     | zombie collector waiting for pid 3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:27,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:22:13] 2026-01-10 19:21:27,233 | INFO     | collected zombie processes
[2026-01-10 20:22:13] 2026-01-10 19:21:27,233 | INFO     | will attempt to kill all subprocesses of pid=3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:27,310 | INFO     | process IDs to be killed: [3142705] (in reverse order)
[2026-01-10 20:22:13] 2026-01-10 19:21:27,347 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:22:13] 2026-01-10 19:21:27,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:22:13] 2026-01-10 19:21:27,349 | INFO     | did not find any defunct processes belonging to 3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:27,352 | INFO     | did not find any defunct processes belonging to 3142705
[2026-01-10 20:22:13] 2026-01-10 19:21:27,352 | INFO     | ready for new job
[2026-01-10 20:22:13] 2026-01-10 19:21:27,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:22:13] 2026-01-10 19:21:27,354 | INFO     | ***************************************
[2026-01-10 20:22:13] 2026-01-10 19:21:27,354 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:22:13] 2026-01-10 19:21:27,354 | INFO     | ***************************************
[2026-01-10 20:22:13] 2026-01-10 19:21:27,354 | INFO     | 
[2026-01-10 20:22:13] 2026-01-10 19:21:27,374 | INFO     | architecture information:
[2026-01-10 20:22:13] 2026-01-10 19:21:27,375 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:22:13] 2026-01-10 19:21:27,385 | INFO     | cat /etc/os-release:
[2026-01-10 20:22:13] NAME="CentOS Linux"
[2026-01-10 20:22:13] VERSION="7 (Core)"
[2026-01-10 20:22:13] ID="centos"
[2026-01-10 20:22:13] ID_LIKE="rhel fedora"
[2026-01-10 20:22:13] VERSION_ID="7"
[2026-01-10 20:22:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:22:13] ANSI_COLOR="0;31"
[2026-01-10 20:22:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:22:13] HOME_URL="https://www.centos.org/"
[2026-01-10 20:22:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:22:13] 
[2026-01-10 20:22:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:22:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:22:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:22:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:22:13] 
[2026-01-10 20:22:13] 2026-01-10 19:21:27,385 | INFO     | ***************************************
[2026-01-10 20:22:13] 2026-01-10 19:21:27,888 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-10 20:22:13] 2026-01-10 19:21:27,900 | INFO     | sufficient remaining disk space (35340156928 B)
[2026-01-10 20:22:13] 2026-01-10 19:21:27,900 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:22:13] 2026-01-10 19:21:27,900 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:22:13] 2026-01-10 19:21:27,900 | INFO     | update_server=False
[2026-01-10 20:22:13] 2026-01-10 19:21:27,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:22:13] 2026-01-10 19:21:27,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:22:13] 2026-01-10 19:21:27,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:22:13] 2026-01-10 19:21:27,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:22:13] 2026-01-10 19:21:28,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:22:13] 2026-01-10 19:21:28,312 | INFO     | aborting loop
[2026-01-10 20:22:13] 2026-01-10 19:21:28,408 | INFO     | all job control threads have been joined
[2026-01-10 20:22:13] 2026-01-10 19:21:28,710 | INFO     | all data control threads have been joined
[2026-01-10 20:22:13] 2026-01-10 19:21:28,905 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:28,907 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,205 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,254 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,318 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,324 | INFO     | all payload control threads have been joined
[2026-01-10 20:22:13] 2026-01-10 19:21:29,329 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,413 | INFO     | [job] control thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,713 | INFO     | [data] control thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,905 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:29,986 | INFO     | [job] validate thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:30,025 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:30,202 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:30,258 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:30,264 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:30,325 | INFO     | [payload] control thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:31,982 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:22:13] 2026-01-10 19:21:58,460 | INFO     | PID=3136114 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:22:13] 2026-01-10 19:21:58,461 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:22:13] 2026-01-10 19:21:58,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:22:13] 2026-01-10 19:21:58,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:22:13] 2026-01-10 19:22:06,617 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:22:13] 2026-01-10 19:22:08,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393350342464)>', '<ExcThread(monitor, started 140392615900928)>']
[2026-01-10 20:22:13] 2026-01-10 19:22:08,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:22:13] 2026-01-10 19:22:08,506 | INFO     | [monitor] control thread has ended
[2026-01-10 20:22:13] 2026-01-10 19:22:13,342 | INFO     | all workflow threads have been joined
[2026-01-10 20:22:13] 2026-01-10 19:22:13,343 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:22:13] 2026-01-10 19:22:13,343 | INFO     | traces error code: 0
[2026-01-10 20:22:13] 2026-01-10 19:22:13,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:22:13] 2026-01-10 19:22:13,434 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:22:13] 2026-01-10 19:22:13,437 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:22:13] 2026-01-10 19:22:13,439 [wrapper] pilotpid: 3136114
[2026-01-10 20:22:13] 2026-01-10 19:22:13,441 [wrapper] Pilot exit status: 0
[2026-01-10 20:22:13] 2026-01-10 19:22:13,449 [wrapper] pandaids: 6963170045
[2026-01-10 20:22:13] 2026-01-10 19:22:13,473 [wrapper] cleanup supervisor_pilot 3176717 3136115
[2026-01-10 20:22:13] 2026-01-10 19:22:13,474 [wrapper] Test setup, not cleaning
[2026-01-10 20:22:13] 2026-01-10 19:22:13,477 [wrapper] apfmon messages muted
[2026-01-10 20:22:13] 2026-01-10 19:22:13,479 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:22:13] 2026-01-10 19:22:13,480 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:22:13]  *** Error codes and diagnostics ***
[2026-01-10 20:22:13]     "exeErrorCode": 0,
[2026-01-10 20:22:13]     "exeErrorDiag": "",
[2026-01-10 20:22:13]     "pilotErrorCode": 0,
[2026-01-10 20:22:13]     "pilotErrorDiag": "",
[2026-01-10 20:22:13]  *** Listing of results directory ***
[2026-01-10 20:22:13] total 781364
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 20:22:13] -rwx------ 1 boinc boinc     36322 Jan  9 08:13 runpilot2-wrapper.sh
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc       100 Jan 10 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:22:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 14:58 run_atlas
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc       105 Jan 10 14:58 job.xml
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:58 start_atlas.sh
[2026-01-10 20:22:13] drwxrwx--x 2 boinc boinc      4096 Jan 10 14:58 shared
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc    592613 Jan 10 14:58 input.tar.gz
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc      6045 Jan 10 14:58 init_data.xml
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc 389451780 Jan 10 14:58 EVNT.47962006._000055.pool.root.1
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc         0 Jan 10 14:58 boinc_lockfile
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc      2890 Jan 10 14:58 pandaJob.out
[2026-01-10 20:22:13] -rw------- 1 boinc boinc    989556 Jan 10 14:58 agis_schedconf.cvmfs.json
[2026-01-10 20:22:13] drwx------ 5 boinc boinc      4096 Jan 10 14:58 pilot3
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc       532 Jan 10 20:11 boinc_task_state.xml
[2026-01-10 20:22:13] -rw------- 1 boinc boinc 397486700 Jan 10 20:20 HITS.47962010._000545.pool.root.1
[2026-01-10 20:22:13] -rw------- 1 boinc boinc      1079 Jan 10 20:20 memory_monitor_summary.json
[2026-01-10 20:22:13] -rw------- 1 boinc boinc   1516240 Jan 10 20:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:22:13] -rw------- 1 boinc boinc   1932412 Jan 10 20:20 log.47962010._000545.job.log.tgz.1
[2026-01-10 20:22:13] -rw------- 1 boinc boinc      8620 Jan 10 20:21 heartbeat.json
[2026-01-10 20:22:13] -rw------- 1 boinc boinc        95 Jan 10 20:21 pilot_heartbeat.json
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc      8192 Jan 10 20:21 boinc_mmap_file
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc        29 Jan 10 20:21 wrapper_checkpoint.txt
[2026-01-10 20:22:13] -rw------- 1 boinc boinc      4755 Jan 10 20:22 pilotlog.txt
[2026-01-10 20:22:13] -rw------- 1 boinc boinc   2695368 Jan 10 20:22 log.47962010._000545.job.log.1
[2026-01-10 20:22:13] -rw------- 1 boinc boinc       353 Jan 10 20:22 output.list
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc       620 Jan 10 20:22 runtime_log
[2026-01-10 20:22:13] -rw------- 1 boinc boinc   4648960 Jan 10 20:22 result.tar.gz
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc      8889 Jan 10 20:22 runtime_log.err
[2026-01-10 20:22:13] -rw------- 1 boinc boinc       660 Jan 10 20:22 7GgNDm3rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYQmKDmjCY1hn.diag
[2026-01-10 20:22:13] -rw-r--r-- 1 boinc boinc     20990 Jan 10 20:22 stderr.txt
[2026-01-10 20:22:13] HITS file was successfully produced:
[2026-01-10 20:22:13] -rw------- 1 boinc boinc 397486700 Jan 10 20:20 shared/HITS.pool.root.1
[2026-01-10 20:22:13]  *** Contents of shared directory: ***
[2026-01-10 20:22:13] total 773644
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:58 start_atlas.sh
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc    592613 Jan 10 14:58 input.tar.gz
[2026-01-10 20:22:13] -rw-r--r-- 2 boinc boinc 389451780 Jan 10 14:58 ATLAS.root_0
[2026-01-10 20:22:13] -rw------- 1 boinc boinc 397486700 Jan 10 20:20 HITS.pool.root.1
[2026-01-10 20:22:13] -rw------- 1 boinc boinc   4648960 Jan 10 20:22 result.tar.gz
20:22:15 (3132288): run_atlas exited; CPU time 224837.550548
20:22:15 (3132288): called boinc_finish(0)

</stderr_txt>
]]>

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