Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:48:43 (8525): wrapper (7.7.26015): starting
23:48:43 (8525): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:48:43] Arguments: --nthreads 8
[2026-01-09 23:48:43] Threads: 8
[2026-01-09 23:48:43] Checking for CVMFS
[2026-01-09 23:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:48:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:48:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:48:43] 2.11.0.0 5116 129508 89476 154959 1 1 2207493 4096001 0 130560 4 5992594 99.072 10624919 603 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-09 23:48:43] CVMFS is ok
[2026-01-09 23:48:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 23:48:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 23:48:43] Further information can be found at the LHC@home message board.
[2026-01-09 23:48:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:48:43] Checking for apptainer binary...
[2026-01-09 23:48:43] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-09 23:48:43] apptainer is not installed, using version from CVMFS
[2026-01-09 23:48:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:48:52] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009531/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node348
[2026-01-09 23:48:52] apptainer works
[2026-01-09 23:48:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:48:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:48:52] Starting ATLAS job with PandaID=6963161475
[2026-01-09 23:48:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009531/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:05:28]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:05:28]  filetype=log
[2026-01-10 01:05:28]  guid=a39c6bd3-3a9d-4471-8216-7ea12cf61e02
[2026-01-10 01:05:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-10 01:05:28]  is_altstaged=None
[2026-01-10 01:05:28]  is_tar=False
[2026-01-10 01:05:28]  lfn=log.47898826._033137.job.log.tgz.1
[2026-01-10 01:05:28]  mtime=0
[2026-01-10 01:05:28]  protocol_id=None
[2026-01-10 01:05:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 01:05:28]  replicas=None
[2026-01-10 01:05:28]  scope=mc23_13p6TeV
[2026-01-10 01:05:28]  status=None
[2026-01-10 01:05:28]  status_code=0
[2026-01-10 01:05:28]  storage_token=
[2026-01-10 01:05:28]  surl=/tmp/job_11009531/atlas/pilot/slots/0/PanDA_Pilot-6963161475/log.47898826._033137.job.log.tgz.1
[2026-01-10 01:05:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/de/log.47898826._033137.job.log.tgz.1
[2026-01-10 01:05:28]  workdir=None
[2026-01-10 01:05:28] ]
[2026-01-10 01:05:28] 2026-01-10 00:04:54,354 | INFO     | transferring file log.47898826._033137.job.log.tgz.1 from /tmp/job_11009531/atlas/pilot/slots/0/PanDA_Pilot-6963161475/log.47898826._033137.job.log.tgz.1 to /tmp/j
[2026-01-10 01:05:28] 2026-01-10 00:04:54,354 | INFO     | executing command: /usr/bin/env mv /tmp/job_11009531/atlas/pilot/slots/0/PanDA_Pilot-6963161475/log.47898826._033137.job.log.tgz.1 /tmp/job_11009531/atlas/pilot/sl
[2026-01-10 01:05:28] 2026-01-10 00:04:54,361 | INFO     | adding to output.list: log.47898826._033137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/de/log.47898826._033137.job.log.tg
[2026-01-10 01:05:28] 2026-01-10 00:04:54,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 01:05:28] 2026-01-10 00:04:54,362 | INFO     | summary of transferred files:
[2026-01-10 01:05:28] 2026-01-10 00:04:54,362 | INFO     |  -- lfn=log.47898826._033137.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 01:05:28] 2026-01-10 00:04:54,362 | INFO     | stage-out finished correctly
[2026-01-10 01:05:28] 2026-01-10 00:04:54,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 01:05:28] 2026-01-10 00:04:54,458 | INFO     | job 6963161475 has state=finished
[2026-01-10 01:05:28] 2026-01-10 00:04:54,458 | INFO     | preparing for final server update for job 6963161475 in state='finished'
[2026-01-10 01:05:28] 2026-01-10 00:04:54,458 | INFO     | this job has now completed (state=finished)
[2026-01-10 01:05:28] 2026-01-10 00:04:54,459 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 01:05:28] 2026-01-10 00:04:54,459 | INFO     | log transfer has been attempted: DONE
[2026-01-10 01:05:28] 2026-01-10 00:04:54,459 | INFO     | job 6963161475 has finished - writing final server update
[2026-01-10 01:05:28] 2026-01-10 00:04:54,459 | INFO     | total number of processed events: 400 (read)
[2026-01-10 01:05:28] 2026-01-10 00:04:54,459 | INFO     | executing command: lscpu
[2026-01-10 01:05:28] 2026-01-10 00:04:54,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 01:05:28] 2026-01-10 00:04:54,988 | INFO     | time since job start (4543s) is within the limit (349056.0s)
[2026-01-10 01:05:28] 2026-01-10 00:04:55,460 | INFO     | monitor loop #342: job 0:6963161475 is in state 'finished'
[2026-01-10 01:05:28] 2026-01-10 00:04:55,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,269 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 01:05:28] 2026-01-10 00:04:56,273 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2380.550171875
[2026-01-10 01:05:28] 2026-01-10 00:04:56,278 | INFO     | using path: /tmp/job_11009531/atlas/pilot/slots/0/PanDA_Pilot-6963161475/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,279 | INFO     | extracted standard info from prmon json
[2026-01-10 01:05:28] 2026-01-10 00:04:56,279 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:05:28] 2026-01-10 00:04:56,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:05:28] 2026-01-10 00:04:56,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:05:28] 2026-01-10 00:04:56,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | sum of square deviations: 93240818.0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | sum of deviations: 1415934134.9999998
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | mean x: 1768001300.0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | mean y: 2533121.194029851
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | intersect: -26845937807.003696
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | chi2: 0.07060355104613132
[2026-01-10 01:05:28] 2026-01-10 00:04:56,280 | INFO     | current memory leak: 15.19 B/s (using 67 data points, chi2=0.07)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | could have reported an average CPU frequency of 2533 MHz (6 samples)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | ..............................
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . Timing measurements:
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . get job = 0 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . initial setup = 4 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . payload setup = 13 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . stage-in = 0 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . payload execution = 4511 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . stage-out = 0 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | . log creation = 0 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,281 | INFO     | ..............................
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | 
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | job summary report
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | --------------------------------------------------
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | PanDA job id: 6963161475
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | task id: 47898826
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | errors: (none)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | pilot state: finished 
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | transexitcode: 0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | exeerrorcode: 0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | exeerrordiag: 
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | exitcode: 0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | exitmsg: OK
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | cpuconsumptiontime: 28383 s
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | nevents: 400
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | neventsw: 0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,818 | INFO     | pid: 28807
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | pgrp: 28807
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | corecount: 8
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | event service: False
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | sizes: {0: 2284097, 2: 2284359, 11: 2284387, 4528: 2310539, 4529: 2319623, 4531: 2319761}
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | --------------------------------------------------
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | 
[2026-01-10 01:05:28] 2026-01-10 00:04:56,819 | INFO     | executing command: ls -lF /tmp/job_11009531/atlas/pilot/slots/0
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:05:28] 2026-01-10 00:04:56,828 | INFO     | job 6963161475 has completed (purged errors)
[2026-01-10 01:05:28] 2026-01-10 00:04:56,828 | INFO     | overall cleanup function is called
[2026-01-10 01:05:28] 2026-01-10 00:04:57,834 | INFO     | --- collectZombieJob: --- 10, [28807]
[2026-01-10 01:05:28] 2026-01-10 00:04:57,834 | INFO     | zombie collector waiting for pid 28807
[2026-01-10 01:05:28] 2026-01-10 00:04:57,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:05:28] 2026-01-10 00:04:57,834 | INFO     | collected zombie processes
[2026-01-10 01:05:28] 2026-01-10 00:04:57,834 | INFO     | will attempt to kill all subprocesses of pid=28807
[2026-01-10 01:05:28] 2026-01-10 00:04:57,925 | INFO     | process IDs to be killed: [28807] (in reverse order)
[2026-01-10 01:05:28] 2026-01-10 00:04:57,955 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:05:28] 2026-01-10 00:04:57,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:05:28] 2026-01-10 00:04:57,959 | INFO     | did not find any defunct processes belonging to 28807
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | did not find any defunct processes belonging to 28807
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | ready for new job
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | ***************************************
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:05:28] 2026-01-10 00:04:57,962 | INFO     | ***************************************
[2026-01-10 01:05:28] 2026-01-10 00:04:57,963 | INFO     | 
[2026-01-10 01:05:28] 2026-01-10 00:04:57,978 | INFO     | architecture information:
[2026-01-10 01:05:28] 2026-01-10 00:04:57,978 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:05:28] 2026-01-10 00:04:57,984 | INFO     | cat /etc/os-release:
[2026-01-10 01:05:28] NAME="CentOS Linux"
[2026-01-10 01:05:28] VERSION="7 (Core)"
[2026-01-10 01:05:28] ID="centos"
[2026-01-10 01:05:28] ID_LIKE="rhel fedora"
[2026-01-10 01:05:28] VERSION_ID="7"
[2026-01-10 01:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:05:28] ANSI_COLOR="0;31"
[2026-01-10 01:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:05:28] HOME_URL="https://www.centos.org/"
[2026-01-10 01:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:05:28] 
[2026-01-10 01:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:05:28] 
[2026-01-10 01:05:28] 2026-01-10 00:04:57,984 | INFO     | ***************************************
[2026-01-10 01:05:28] 2026-01-10 00:04:58,487 | INFO     | executing command: df -mP /tmp/job_11009531/atlas/pilot/slots/0
[2026-01-10 01:05:28] 2026-01-10 00:04:58,492 | INFO     | sufficient remaining disk space (227056549888 B)
[2026-01-10 01:05:28] 2026-01-10 00:04:58,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:05:28] 2026-01-10 00:04:58,493 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:05:28] 2026-01-10 00:04:58,493 | INFO     | update_server=False
[2026-01-10 01:05:28] 2026-01-10 00:04:58,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:05:28] 2026-01-10 00:04:58,765 | INFO     | all job control threads have been joined
[2026-01-10 01:05:28] 2026-01-10 00:04:58,859 | INFO     | all data control threads have been joined
[2026-01-10 01:05:28] 2026-01-10 00:04:58,926 | INFO     | all payload control threads have been joined
[2026-01-10 01:05:28] 2026-01-10 00:04:58,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:05:28] 2026-01-10 00:04:58,968 | INFO     | aborting loop
[2026-01-10 01:05:28] 2026-01-10 00:04:59,002 | INFO     | job.realtimelogging is not enabled
[2026-01-10 01:05:28] 2026-01-10 00:04:59,498 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,564 | INFO     | [job] validate thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,730 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,770 | INFO     | [job] control thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,864 | INFO     | [data] control thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:05:28] 2026-01-10 00:04:59,932 | INFO     | [payload] control thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,955 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,973 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:04:59,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:00,007 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:00,182 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:00,326 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:00,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:05:28] 2026-01-10 00:05:00,546 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:01,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:05:28] 2026-01-10 00:05:01,925 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:02,345 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:04,469 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:05:28] 2026-01-10 00:05:18,462 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:05:28] 2026-01-10 00:05:19,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056616704)>']
[2026-01-10 01:05:28] 2026-01-10 00:05:24,973 | INFO     | all workflow threads have been joined
[2026-01-10 01:05:28] 2026-01-10 00:05:24,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:05:28] 2026-01-10 00:05:24,973 | INFO     | traces error code: 0
[2026-01-10 01:05:28] 2026-01-10 00:05:24,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:05:28] 2026-01-10 00:05:28,168 | INFO     | PID=13462 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 01:05:28] 2026-01-10 00:05:28,169 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:05:28] 2026-01-10 00:05:28,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:05:28] 2026-01-10 00:05:28,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:05:28] 2026-01-10 00:05:28,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:05:28] 2026-01-10 00:05:28,169 | INFO     | [monitor] control thread has ended
[2026-01-10 01:05:28] 2026-01-10 00:05:28,220 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:05:28] 2026-01-10 00:05:28,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:05:28] 2026-01-10 00:05:28,222 [wrapper] pilotpid: 13462
[2026-01-10 01:05:28] 2026-01-10 00:05:28,223 [wrapper] Pilot exit status: 0
[2026-01-10 01:05:28] 2026-01-10 00:05:28,228 [wrapper] pandaids: 6963161475
[2026-01-10 01:05:28] 2026-01-10 00:05:28,248 [wrapper] cleanup supervisor_pilot 20649 13463
[2026-01-10 01:05:28] 2026-01-10 00:05:28,249 [wrapper] Test setup, not cleaning
[2026-01-10 01:05:28] 2026-01-10 00:05:28,250 [wrapper] apfmon messages muted
[2026-01-10 01:05:28] 2026-01-10 00:05:28,251 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:05:28] 2026-01-10 00:05:28,252 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:05:28]  *** Error codes and diagnostics ***
[2026-01-10 01:05:28]     "exeErrorCode": 0,
[2026-01-10 01:05:28]     "exeErrorDiag": "",
[2026-01-10 01:05:28]     "pilotErrorCode": 0,
[2026-01-10 01:05:28]     "pilotErrorDiag": "",
[2026-01-10 01:05:28]  *** Listing of results directory ***
[2026-01-10 01:05:28] total 439756
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 01:05:28] -rwx------ 1 mf493845 unix-user     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      5112 Jan  8 22:51 queuedata.json
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       100 Jan  9 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:05:28] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan  9 22:51 run_atlas
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       105 Jan  9 22:51 job.xml
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user 223485414 Jan  9 23:48 EVNT.47898824._001281.pool.root.1
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user     15847 Jan  9 23:48 start_atlas.sh
[2026-01-10 01:05:28] drwxrwx--x 2 mf493845 unix-user       100 Jan  9 23:48 shared
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user    592400 Jan  9 23:48 input.tar.gz
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      6390 Jan  9 23:48 init_data.xml
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user         0 Jan  9 23:48 boinc_setup_complete
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      8192 Jan  9 23:48 boinc_mmap_file
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user         0 Jan  9 23:48 boinc_lockfile
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      2520 Jan  9 23:48 pandaJob.out
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user    989375 Jan  9 23:49 agis_schedconf.cvmfs.json
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user   1516240 Jan  9 23:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:05:28] drwx------ 5 mf493845 unix-user       440 Jan  9 23:49 pilot3
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user 220910044 Jan 10 01:04 HITS.47898826._033137.pool.root.1
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      1020 Jan 10 01:04 memory_monitor_summary.json
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user        95 Jan 10 01:04 pilot_heartbeat.json
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user    325623 Jan 10 01:04 log.47898826._033137.job.log.tgz.1
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      7778 Jan 10 01:04 heartbeat.json
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       745 Jan 10 01:05 pilotlog.txt
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user    688449 Jan 10 01:05 log.47898826._033137.job.log.1
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       357 Jan 10 01:05 output.list
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       620 Jan 10 01:05 runtime_log
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user   1034240 Jan 10 01:05 result.tar.gz
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user      9220 Jan 10 01:05 runtime_log.err
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user       646 Jan 10 01:05 Cy3KDmY3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvOgKDmyNY1sm.diag
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user     21779 Jan 10 01:05 stderr.txt
[2026-01-10 01:05:28] HITS file was successfully produced:
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user 220910044 Jan 10 01:04 shared/HITS.pool.root.1
[2026-01-10 01:05:28]  *** Contents of shared directory: ***
[2026-01-10 01:05:28] total 435592
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user 223485414 Jan  9 23:48 ATLAS.root_0
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user     15847 Jan  9 23:48 start_atlas.sh
[2026-01-10 01:05:28] -rw-r--r-- 2 mf493845 unix-user    592400 Jan  9 23:48 input.tar.gz
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user 220910044 Jan 10 01:04 HITS.pool.root.1
[2026-01-10 01:05:28] -rw------- 1 mf493845 unix-user   1034240 Jan 10 01:05 result.tar.gz
01:05:29 (8525): run_atlas exited; CPU time 28438.526287
01:05:29 (8525): called boinc_finish(0)

</stderr_txt>
]]>

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