Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:26 (28943): wrapper (7.7.26015): starting
04:44:26 (28943): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:44:26] Arguments: --nthreads 8
[2026-01-10 04:44:26] Threads: 8
[2026-01-10 04:44:26] Checking for CVMFS
[2026-01-10 04:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:44:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:44:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:44:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:44:29] 2.11.2.0 9196 36332 127500 154966 1 61 16490985 25165825 96 130560 0 8381379 99.585 11607206 2106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 04:44:29] CVMFS is ok
[2026-01-10 04:44:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:44:29] Checking for apptainer binary...
[2026-01-10 04:44:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:44:29] Running /usr/bin/apptainer --version
[2026-01-10 04:44:29] apptainer version 1.3.2-1.el7
[2026-01-10 04:44:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:44:48] cg-vwn422.simple-grid.lan
[2026-01-10 04:44:48] apptainer works
[2026-01-10 04:44:48] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:44:48] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:44:48] Starting ATLAS job with PandaID=6963147377
[2026-01-10 04:44:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:44:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:44:48] 2026-01-10 09:43:57,564 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 10:44:48] 2026-01-10 09:43:57,566 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963147377/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,566 | INFO     | extracted standard info from prmon json
[2026-01-10 10:44:48] 2026-01-10 09:43:57,566 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:44:48] 2026-01-10 09:43:57,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:44:48] 2026-01-10 09:43:57,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:44:48] 2026-01-10 09:43:57,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:44:48] 2026-01-10 09:43:57,574 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:44:48] 2026-01-10 09:43:57,575 | INFO     | sum of square deviations: 12080189290.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,579 | INFO     | sum of deviations: 218659958523.99997
[2026-01-10 10:44:48] 2026-01-10 09:43:57,579 | INFO     | mean x: 1768027795.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,579 | INFO     | mean y: 2428582.138643068
[2026-01-10 10:44:48] 2026-01-10 09:43:57,579 | INFO     | intersect: -32000123285.488518
[2026-01-10 10:44:48] 2026-01-10 09:43:57,580 | INFO     | chi2: 8.08365118704849
[2026-01-10 10:44:48] 2026-01-10 09:43:57,580 | INFO     | sum of square deviations: 11553509647.5
[2026-01-10 10:44:48] 2026-01-10 09:43:57,584 | INFO     | sum of deviations: 237193133952.00003
[2026-01-10 10:44:48] 2026-01-10 09:43:57,584 | INFO     | mean x: 1768027642.5
[2026-01-10 10:44:48] 2026-01-10 09:43:57,584 | INFO     | mean y: 2433871.1796407187
[2026-01-10 10:44:48] 2026-01-10 09:43:57,584 | INFO     | intersect: -36295109492.97769
[2026-01-10 10:44:48] 2026-01-10 09:43:57,585 | INFO     | chi2: 7.355798796650282
[2026-01-10 10:44:48] 2026-01-10 09:43:57,585 | INFO     | current chi2=7.355798796650282 (change=9.004005412360728 %)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,585 | INFO     | right removable region: 333
[2026-01-10 10:44:48] 2026-01-10 09:43:57,586 | INFO     | sum of square deviations: 11553509647.5
[2026-01-10 10:44:48] 2026-01-10 09:43:57,590 | INFO     | sum of deviations: 101234855037.49998
[2026-01-10 10:44:48] 2026-01-10 09:43:57,590 | INFO     | mean x: 1768027947.5
[2026-01-10 10:44:48] 2026-01-10 09:43:57,590 | INFO     | mean y: 2462564.380239521
[2026-01-10 10:44:48] 2026-01-10 09:43:57,590 | INFO     | intersect: -15489457936.689404
[2026-01-10 10:44:48] 2026-01-10 09:43:57,591 | INFO     | chi2: 3.289995591775498
[2026-01-10 10:44:48] 2026-01-10 09:43:57,591 | INFO     | current chi2=3.289995591775498 (change=59.30062399220439 %)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,591 | INFO     | sum of square deviations: 11042365180.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,595 | INFO     | sum of deviations: 15363569678.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,595 | INFO     | mean x: 1768028100.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,595 | INFO     | mean y: 2488151.8936170214
[2026-01-10 10:44:48] 2026-01-10 09:43:57,595 | INFO     | intersect: -2457421701.134079
[2026-01-10 10:44:48] 2026-01-10 09:43:57,596 | INFO     | chi2: 0.8561356934649131
[2026-01-10 10:44:48] 2026-01-10 09:43:57,596 | INFO     | current chi2=0.8561356934649131 (change=73.97760362946609 %)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,597 | INFO     | sum of square deviations: 10546523325.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,600 | INFO     | sum of deviations: 4277845789.500004
[2026-01-10 10:44:48] 2026-01-10 09:43:57,600 | INFO     | mean x: 1768028252.5
[2026-01-10 10:44:48] 2026-01-10 09:43:57,601 | INFO     | mean y: 2491540.0524691357
[2026-01-10 10:44:48] 2026-01-10 09:43:57,601 | INFO     | intersect: -714650212.0304785
[2026-01-10 10:44:48] 2026-01-10 09:43:57,601 | INFO     | chi2: 0.798345322134643
[2026-01-10 10:44:48] 2026-01-10 09:43:57,601 | INFO     | current chi2=0.798345322134643 (change=6.750141568842148 %)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,601 | INFO     | left removable region: 30
[2026-01-10 10:44:48] 2026-01-10 09:43:57,602 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,605 | INFO     | sum of deviations: 16839489993.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,605 | INFO     | mean x: 1768028527.0
[2026-01-10 10:44:48] 2026-01-10 09:43:57,605 | INFO     | mean y: 2500797.782178218
[2026-01-10 10:44:48] 2026-01-10 09:43:57,606 | INFO     | intersect: -3449068706.140613
[2026-01-10 10:44:48] 2026-01-10 09:43:57,606 | INFO     | chi2: 0.0020269142461428113
[2026-01-10 10:44:48] 2026-01-10 09:43:57,606 | INFO     | current memory leak: 1.95 B/s (using 303 data points, chi2=0.00)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,607 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 10:44:48] 2026-01-10 09:43:57,607 | INFO     | ..............................
[2026-01-10 10:44:48] 2026-01-10 09:43:57,607 | INFO     | . Timing measurements:
[2026-01-10 10:44:48] 2026-01-10 09:43:57,607 | INFO     | . get job = 0 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,607 | INFO     | . initial setup = 10 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | . payload setup = 149 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | . stage-in = 0 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | . payload execution = 20819 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | . stage-out = 5 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | . log creation = 2 s
[2026-01-10 10:44:48] 2026-01-10 09:43:57,608 | INFO     | ..............................
[2026-01-10 10:44:48] 2026-01-10 09:43:58,169 | INFO     | 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,169 | INFO     | job summary report
[2026-01-10 10:44:48] 2026-01-10 09:43:58,169 | INFO     | --------------------------------------------------
[2026-01-10 10:44:48] 2026-01-10 09:43:58,169 | INFO     | PanDA job id: 6963147377
[2026-01-10 10:44:48] 2026-01-10 09:43:58,169 | INFO     | task id: 47898826
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | errors: (none)
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | pilot state: finished 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | transexitcode: 0
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | exeerrorcode: 0
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | exeerrordiag: 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | exitcode: 0
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | exitmsg: OK
[2026-01-10 10:44:48] 2026-01-10 09:43:58,170 | INFO     | cpuconsumptiontime: 78250 s
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | nevents: 400
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | neventsw: 0
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | pid: 6760
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | pgrp: 6760
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | corecount: 8
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | event service: False
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 33: 2284055, 44: 2284111, 55: 2284267, 66: 2284295, 76: 2284323, 87: 2284379, 98: 2284407, 100: 2284977, 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | --------------------------------------------------
[2026-01-10 10:44:48] 2026-01-10 09:43:58,171 | INFO     | 
[2026-01-10 10:44:48] 2026-01-10 09:43:58,172 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 10:44:48] 2026-01-10 09:43:58,295 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:44:48] 2026-01-10 09:43:58,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,298 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:44:48] 2026-01-10 09:43:58,298 | INFO     | job 6963147377 has completed (purged errors)
[2026-01-10 10:44:48] 2026-01-10 09:43:58,298 | INFO     | overall cleanup function is called
[2026-01-10 10:44:48] 2026-01-10 09:43:59,307 | INFO     | --- collectZombieJob: --- 10, [6760]
[2026-01-10 10:44:48] 2026-01-10 09:43:59,307 | INFO     | zombie collector waiting for pid 6760
[2026-01-10 10:44:48] 2026-01-10 09:43:59,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:44:48] 2026-01-10 09:43:59,307 | INFO     | collected zombie processes
[2026-01-10 10:44:48] 2026-01-10 09:43:59,307 | INFO     | will attempt to kill all subprocesses of pid=6760
[2026-01-10 10:44:48] 2026-01-10 09:43:59,392 | INFO     | process IDs to be killed: [6760] (in reverse order)
[2026-01-10 10:44:48] 2026-01-10 09:44:00,291 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:44:48] 2026-01-10 09:44:00,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:44:48] 2026-01-10 09:44:00,293 | INFO     | did not find any defunct processes belonging to 6760
[2026-01-10 10:44:48] 2026-01-10 09:44:00,295 | INFO     | did not find any defunct processes belonging to 6760
[2026-01-10 10:44:48] 2026-01-10 09:44:00,295 | INFO     | ready for new job
[2026-01-10 10:44:48] 2026-01-10 09:44:00,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:44:48] 2026-01-10 09:44:00,298 | INFO     | ***************************************
[2026-01-10 10:44:48] 2026-01-10 09:44:00,298 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:44:48] 2026-01-10 09:44:00,298 | INFO     | ***************************************
[2026-01-10 10:44:48] 2026-01-10 09:44:00,298 | INFO     | 
[2026-01-10 10:44:48] 2026-01-10 09:44:00,299 | INFO     | pilot is running in a VM
[2026-01-10 10:44:48] 2026-01-10 09:44:00,299 | INFO     | architecture information:
[2026-01-10 10:44:48] 2026-01-10 09:44:00,299 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:44:48] 2026-01-10 09:44:00,562 | INFO     | cat /etc/os-release:
[2026-01-10 10:44:48] NAME="CentOS Linux"
[2026-01-10 10:44:48] VERSION="7 (Core)"
[2026-01-10 10:44:48] ID="centos"
[2026-01-10 10:44:48] ID_LIKE="rhel fedora"
[2026-01-10 10:44:48] VERSION_ID="7"
[2026-01-10 10:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:44:48] ANSI_COLOR="0;31"
[2026-01-10 10:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:44:48] HOME_URL="https://www.centos.org/"
[2026-01-10 10:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:44:48] 
[2026-01-10 10:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:44:48] 
[2026-01-10 10:44:48] 2026-01-10 09:44:00,563 | INFO     | ***************************************
[2026-01-10 10:44:48] 2026-01-10 09:44:01,066 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 10:44:48] 2026-01-10 09:44:01,342 | INFO     | sufficient remaining disk space (496780705792 B)
[2026-01-10 10:44:48] 2026-01-10 09:44:01,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:44:48] 2026-01-10 09:44:01,343 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:44:48] 2026-01-10 09:44:01,343 | INFO     | update_server=False
[2026-01-10 10:44:48] 2026-01-10 09:44:01,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:44:48] 2026-01-10 09:44:01,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:44:48] 2026-01-10 09:44:01,358 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 10:44:48] 2026-01-10 09:44:01,358 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 10:44:48] 2026-01-10 09:44:01,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:44:48] 2026-01-10 09:44:01,358 | INFO     | will abort loop
[2026-01-10 10:44:48] 2026-01-10 09:44:01,578 | INFO     | all job control threads have been joined
[2026-01-10 10:44:48] 2026-01-10 09:44:01,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:44:48] 2026-01-10 09:44:02,338 | INFO     | all data control threads have been joined
[2026-01-10 10:44:48] 2026-01-10 09:44:02,349 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:02,364 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:02,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:02,577 | INFO     | all payload control threads have been joined
[2026-01-10 10:44:48] 2026-01-10 09:44:02,584 | INFO     | [job] control thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:02,814 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:02,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:44:48] 2026-01-10 09:44:02,928 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,206 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,220 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,263 | INFO     | [job] validate thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,344 | INFO     | [data] control thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,583 | INFO     | [payload] control thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,635 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,714 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,824 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:03,829 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:05,356 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:44:48] 2026-01-10 09:44:29,847 | INFO     | PID=32662 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 10:44:48] 2026-01-10 09:44:29,847 | INFO     | .. there are 2 such processes running
[2026-01-10 10:44:48] 2026-01-10 09:44:29,849 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:44:48] 2026-01-10 09:44:29,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:44:48] 2026-01-10 09:44:29,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:44:48] 2026-01-10 09:44:37,181 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:44:48] 2026-01-10 09:44:38,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296405137216)>', '<ExcThread(monitor, started 140295945565952)>']
[2026-01-10 10:44:48] 2026-01-10 09:44:38,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:44:48] 2026-01-10 09:44:38,903 | INFO     | [monitor] control thread has ended
[2026-01-10 10:44:48] 2026-01-10 09:44:43,539 | INFO     | all workflow threads have been joined
[2026-01-10 10:44:48] 2026-01-10 09:44:43,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:44:48] 2026-01-10 09:44:43,539 | INFO     | traces error code: 0
[2026-01-10 10:44:48] 2026-01-10 09:44:43,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:44:48] 2026-01-10 09:44:44,015 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:44:48] 2026-01-10 09:44:44,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:44:48] 2026-01-10 09:44:44,233 [wrapper] pilotpid: 32662
[2026-01-10 10:44:48] 2026-01-10 09:44:44,289 [wrapper] Pilot exit status: 0
[2026-01-10 10:44:48] 2026-01-10 09:44:44,688 [wrapper] pandaids: 6963147377
[2026-01-10 10:44:48] 2026-01-10 09:44:45,701 [wrapper] cleanup supervisor_pilot  5945 32663
[2026-01-10 10:44:48] 2026-01-10 09:44:45,839 [wrapper] Test setup, not cleaning
[2026-01-10 10:44:48] 2026-01-10 09:44:45,955 [wrapper] apfmon messages muted
[2026-01-10 10:44:48] 2026-01-10 09:44:46,055 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:44:48] 2026-01-10 09:44:46,152 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:44:48]  *** Error codes and diagnostics ***
[2026-01-10 10:44:48]     "exeErrorCode": 0,
[2026-01-10 10:44:48]     "exeErrorDiag": "",
[2026-01-10 10:44:48]     "pilotErrorCode": 0,
[2026-01-10 10:44:48]     "pilotErrorDiag": "",
[2026-01-10 10:44:48]  *** Listing of results directory ***
[2026-01-10 10:44:48] total 435080
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-10 10:44:48] -rwx------. 1 boinc boinc     36322 Jan  8 17:05 runpilot2-wrapper.sh
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:07 queuedata.json
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc       100 Jan 10 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:44:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 04:44 run_atlas
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc       105 Jan 10 04:44 job.xml
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc 221080696 Jan 10 04:44 EVNT.47898824._001099.pool.root.1
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc    592401 Jan 10 04:44 input.tar.gz
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc      6390 Jan 10 04:44 init_data.xml
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc     15847 Jan 10 04:44 start_atlas.sh
[2026-01-10 10:44:48] drwxrwx--x. 2 boinc boinc        68 Jan 10 04:44 shared
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc         0 Jan 10 04:44 boinc_lockfile
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc      2520 Jan 10 04:44 pandaJob.out
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc    989374 Jan 10 04:48 agis_schedconf.cvmfs.json
[2026-01-10 10:44:48] drwx------. 5 boinc boinc      4096 Jan 10 04:49 pilot3
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc 213722175 Jan 10 10:40 HITS.47898826._027572.pool.root.1
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc       531 Jan 10 10:40 boinc_task_state.xml
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc      1011 Jan 10 10:41 memory_monitor_summary.json
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc   1516240 Jan 10 10:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc    564439 Jan 10 10:42 log.47898826._027572.job.log.tgz.1
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc      7779 Jan 10 10:43 heartbeat.json
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc        28 Jan 10 10:44 wrapper_checkpoint.txt
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc      8192 Jan 10 10:44 boinc_mmap_file
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc        95 Jan 10 10:44 pilot_heartbeat.json
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc      5070 Jan 10 10:44 pilotlog.txt
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc   2843398 Jan 10 10:44 log.47898826._027572.job.log.1
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc       357 Jan 10 10:44 output.list
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc       620 Jan 10 10:44 runtime_log
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc   3430400 Jan 10 10:44 result.tar.gz
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc      8817 Jan 10 10:44 runtime_log.err
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc       657 Jan 10 10:44 i9wNDm0g7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvykKDmhzgb6n.diag
[2026-01-10 10:44:48] -rw-r--r--. 1 boinc boinc     20779 Jan 10 10:44 stderr.txt
[2026-01-10 10:44:48] HITS file was successfully produced:
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc 213722175 Jan 10 10:40 shared/HITS.pool.root.1
[2026-01-10 10:44:48]  *** Contents of shared directory: ***
[2026-01-10 10:44:48] total 428564
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc 221080696 Jan 10 04:44 ATLAS.root_0
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc    592401 Jan 10 04:44 input.tar.gz
[2026-01-10 10:44:48] -rw-r--r--. 2 boinc boinc     15847 Jan 10 04:44 start_atlas.sh
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc 213722175 Jan 10 10:40 HITS.pool.root.1
[2026-01-10 10:44:48] -rw-------. 1 boinc boinc   3430400 Jan 10 10:44 result.tar.gz
10:44:50 (28943): run_atlas exited; CPU time 78464.616293
10:44:50 (28943): called boinc_finish(0)

</stderr_txt>
]]>

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