Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:51:25 (3354198): wrapper (7.7.26015): starting
19:51:25 (3354198): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 19:51:25] Arguments: --nthreads 11
[2026-01-09 19:51:25] Threads: 11
[2026-01-09 19:51:25] Checking for CVMFS
[2026-01-09 19:51:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:51:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:51:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:51:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:51:26] 2.13.3.0 13122 94155 364324 154962 2 177 26562234 32935937 18713 16776704 0 356077499 99.520 460605973 35977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:51:26] CVMFS is ok
[2026-01-09 19:51:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:51:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:51:26] Further information can be found at the LHC@home message board.
[2026-01-09 19:51:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:51:26] Checking for apptainer binary...
[2026-01-09 19:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:51:26] Running /usr/bin/apptainer --version
[2026-01-09 19:51:26] apptainer version 1.4.5-2.el9
[2026-01-09 19:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:51:27] c6-8-25-2.aglt2.org
[2026-01-09 19:51:27] apptainer works
[2026-01-09 19:51:27] Set ATHENA_PROC_NUMBER=11
[2026-01-09 19:51:27] Set ATHENA_CORE_NUMBER=11
[2026-01-09 19:51:27] Starting ATLAS job with PandaID=6963161743
[2026-01-09 19:51:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:59:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:59:44] 2026-01-10 03:58:41,086 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2681.2100312499997
[2026-01-09 22:59:44] 2026-01-10 03:58:41,192 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161743/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,211 | INFO     | extracted standard info from prmon json
[2026-01-09 22:59:44] 2026-01-10 03:58:41,211 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:59:44] 2026-01-10 03:58:41,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:59:44] 2026-01-10 03:58:41,220 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:59:44] 2026-01-10 03:58:41,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:59:44] 2026-01-10 03:58:41,249 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:59:44] 2026-01-10 03:58:41,249 | INFO     | sum of square deviations: 1838639212.9723742
[2026-01-09 22:59:44] 2026-01-10 03:58:41,250 | INFO     | sum of deviations: -2499555107.6685085
[2026-01-09 22:59:44] 2026-01-10 03:58:41,250 | INFO     | mean x: 1768011945.1491714
[2026-01-09 22:59:44] 2026-01-10 03:58:41,251 | INFO     | mean y: 2617861.2099447516
[2026-01-09 22:59:44] 2026-01-10 03:58:41,251 | INFO     | intersect: 2406158075.481958
[2026-01-09 22:59:44] 2026-01-10 03:58:41,251 | INFO     | chi2: 3.746483873452804
[2026-01-09 22:59:44] 2026-01-10 03:58:41,251 | INFO     | sum of square deviations: 1690440017.8579507
[2026-01-09 22:59:44] 2026-01-10 03:58:41,260 | INFO     | sum of deviations: 22484907472.909103
[2026-01-09 22:59:44] 2026-01-10 03:58:41,261 | INFO     | mean x: 1768011792.653409
[2026-01-09 22:59:44] 2026-01-10 03:58:41,261 | INFO     | mean y: 2643142.8181818184
[2026-01-09 22:59:44] 2026-01-10 03:58:41,261 | INFO     | intersect: -23514063246.562027
[2026-01-09 22:59:44] 2026-01-10 03:58:41,261 | INFO     | chi2: 2.225323060981355
[2026-01-09 22:59:44] 2026-01-10 03:58:41,261 | INFO     | current chi2=2.225323060981355 (change=40.602358474041125 %)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,262 | INFO     | sum of square deviations: 1550416042.0467787
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | sum of deviations: 21972367440.836266
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | mean x: 1768011640.1520467
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | mean y: 2642584.4678362575
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | intersect: -25053471609.121155
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | chi2: 2.2280396285394075
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | current chi2=2.2280396285394075 (change=-0.12207519913331169 %)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,263 | INFO     | right removable region: 170
[2026-01-09 22:59:44] 2026-01-10 03:58:41,264 | INFO     | sum of square deviations: 1690423547.8579507
[2026-01-09 22:59:44] 2026-01-10 03:58:41,276 | INFO     | sum of deviations: -40182096795.528404
[2026-01-09 22:59:44] 2026-01-10 03:58:41,276 | INFO     | mean x: 1768012097.653409
[2026-01-09 22:59:44] 2026-01-10 03:58:41,276 | INFO     | mean y: 2656276.6306818184
[2026-01-09 22:59:44] 2026-01-10 03:58:41,276 | INFO     | intersect: 42029066363.97072
[2026-01-09 22:59:44] 2026-01-10 03:58:41,277 | INFO     | chi2: 1.8015219053117253
[2026-01-09 22:59:44] 2026-01-10 03:58:41,277 | INFO     | current chi2=1.8015219053117253 (change=51.91432911063297 %)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,277 | INFO     | sum of square deviations: 1550394082.7368464
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | sum of deviations: -43616221199.94738
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | mean x: 1768012250.1578948
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | mean y: 2659990.590643275
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | intersect: 49740990551.66791
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | chi2: 1.766712907686457
[2026-01-09 22:59:44] 2026-01-10 03:58:41,278 | INFO     | current chi2=1.766712907686457 (change=1.932199521006945 %)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,279 | INFO     | left removable region: 20
[2026-01-09 22:59:44] 2026-01-10 03:58:41,279 | INFO     | sum of square deviations: 1046508729.0933363
[2026-01-09 22:59:44] 2026-01-10 03:58:41,291 | INFO     | sum of deviations: -3287778679.4933314
[2026-01-09 22:59:44] 2026-01-10 03:58:41,291 | INFO     | mean x: 1768012219.6266668
[2026-01-09 22:59:44] 2026-01-10 03:58:41,291 | INFO     | mean y: 2668698.473333333
[2026-01-09 22:59:44] 2026-01-10 03:58:41,291 | INFO     | intersect: 5557168837.051537
[2026-01-09 22:59:44] 2026-01-10 03:58:41,291 | INFO     | chi2: 0.0785178074855182
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | current memory leak: -3.14 B/s (using 150 data points, chi2=0.08)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | could have reported an average CPU frequency of 2659 MHz (10 samples)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | ..............................
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | . Timing measurements:
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | . get job = 0 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | . initial setup = 4 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,292 | INFO     | . payload setup = 30 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,293 | INFO     | . stage-in = 0 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,293 | INFO     | . payload execution = 11051 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,293 | INFO     | . stage-out = 5 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,293 | INFO     | . log creation = 0 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,293 | INFO     | ..............................
[2026-01-09 22:59:44] 2026-01-10 03:58:41,862 | INFO     | 
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | job summary report
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | --------------------------------------------------
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | PanDA job id: 6963161743
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | task id: 47898826
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | errors: (none)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | pilot state: finished 
[2026-01-09 22:59:44] 2026-01-10 03:58:41,864 | INFO     | transexitcode: 0
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | exeerrorcode: 0
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | exeerrordiag: 
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | exitcode: 0
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | exitmsg: OK
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | cpuconsumptiontime: 57188 s
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | nevents: 400
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | neventsw: 0
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | pid: 3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | pgrp: 3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:41,865 | INFO     | corecount: 11
[2026-01-09 22:59:44] 2026-01-10 03:58:41,866 | INFO     | event service: False
[2026-01-09 22:59:44] 2026-01-10 03:58:41,866 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 26: 2284370, 35: 2284526, 11086: 2313780, 11087: 2313779, 11093: 2322833, 11097: 2322889, 111
[2026-01-09 22:59:44] 2026-01-10 03:58:41,866 | INFO     | --------------------------------------------------
[2026-01-09 22:59:44] 2026-01-10 03:58:41,866 | INFO     | 
[2026-01-09 22:59:44] 2026-01-10 03:58:41,866 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:59:44] 2026-01-10 03:58:41,938 | INFO     | time since job start (11182s) is within the limit (349056.0s)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:59:44] 2026-01-10 03:58:41,961 | INFO     | job 6963161743 has completed (purged errors)
[2026-01-09 22:59:44] 2026-01-10 03:58:41,962 | INFO     | overall cleanup function is called
[2026-01-09 22:59:44] 2026-01-10 03:58:42,974 | INFO     | --- collectZombieJob: --- 10, [3367921]
[2026-01-09 22:59:44] 2026-01-10 03:58:42,975 | INFO     | zombie collector waiting for pid 3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:42,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:59:44] 2026-01-10 03:58:42,975 | INFO     | collected zombie processes
[2026-01-09 22:59:44] 2026-01-10 03:58:42,975 | INFO     | will attempt to kill all subprocesses of pid=3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:43,964 | INFO     | process IDs to be killed: [3367921] (in reverse order)
[2026-01-09 22:59:44] 2026-01-10 03:58:44,197 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:59:44] 2026-01-10 03:58:44,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:59:44] 2026-01-10 03:58:44,228 | INFO     | did not find any defunct processes belonging to 3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:44,253 | INFO     | did not find any defunct processes belonging to 3367921
[2026-01-09 22:59:44] 2026-01-10 03:58:44,254 | INFO     | ready for new job
[2026-01-09 22:59:44] 2026-01-10 03:58:44,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:59:44] 2026-01-10 03:58:44,262 | INFO     | ***************************************
[2026-01-09 22:59:44] 2026-01-10 03:58:44,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:59:44] 2026-01-10 03:58:44,263 | INFO     | ***************************************
[2026-01-09 22:59:44] 2026-01-10 03:58:44,263 | INFO     | 
[2026-01-09 22:59:44] 2026-01-10 03:58:44,275 | INFO     | architecture information:
[2026-01-09 22:59:44] 2026-01-10 03:58:44,280 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:59:44] 2026-01-10 03:58:44,326 | INFO     | cat /etc/os-release:
[2026-01-09 22:59:44] NAME="CentOS Linux"
[2026-01-09 22:59:44] VERSION="7 (Core)"
[2026-01-09 22:59:44] ID="centos"
[2026-01-09 22:59:44] ID_LIKE="rhel fedora"
[2026-01-09 22:59:44] VERSION_ID="7"
[2026-01-09 22:59:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:59:44] ANSI_COLOR="0;31"
[2026-01-09 22:59:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:59:44] HOME_URL="https://www.centos.org/"
[2026-01-09 22:59:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:59:44] 
[2026-01-09 22:59:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:59:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:59:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:59:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:59:44] 
[2026-01-09 22:59:44] 2026-01-10 03:58:44,326 | INFO     | ***************************************
[2026-01-09 22:59:44] 2026-01-10 03:58:44,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:59:44] 2026-01-10 03:58:44,883 | INFO     | sufficient remaining disk space (74784440320 B)
[2026-01-09 22:59:44] 2026-01-10 03:58:44,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:59:44] 2026-01-10 03:58:44,884 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:59:44] 2026-01-10 03:58:44,884 | INFO     | update_server=False
[2026-01-09 22:59:44] 2026-01-10 03:58:44,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:59:44] 2026-01-10 03:58:44,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:59:44] 2026-01-10 03:58:45,075 | INFO     | all job control threads have been joined
[2026-01-09 22:59:44] 2026-01-10 03:58:45,285 | INFO     | all data control threads have been joined
[2026-01-09 22:59:44] 2026-01-10 03:58:45,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:59:44] 2026-01-10 03:58:45,343 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:59:44] 2026-01-10 03:58:45,344 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:59:44] 2026-01-10 03:58:45,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:59:44] 2026-01-10 03:58:45,344 | INFO     | will abort loop
[2026-01-09 22:59:44] 2026-01-10 03:58:45,890 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,082 | INFO     | [job] control thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,087 | INFO     | all payload control threads have been joined
[2026-01-09 22:59:44] 2026-01-10 03:58:46,292 | INFO     | [data] control thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,350 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,479 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,520 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,847 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,850 | INFO     | [job] validate thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:46,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:59:44] 2026-01-10 03:58:47,093 | INFO     | [payload] control thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,140 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,141 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,294 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,333 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:47,917 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:58:48,893 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:59:44] 2026-01-10 03:59:18,164 | INFO     | PID=3358625 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:59:44] 2026-01-10 03:59:18,191 | INFO     | .. there are 15 such processes running
[2026-01-09 22:59:44] 2026-01-10 03:59:18,192 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:59:44] 2026-01-10 03:59:18,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:59:44] 2026-01-10 03:59:18,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:59:44] 2026-01-10 03:59:37,932 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:59:44] 2026-01-10 03:59:37,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861148337984)>', '<ExcThread(monitor, started 139860434216704)>']
[2026-01-09 22:59:44] 2026-01-10 03:59:38,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:59:44] 2026-01-10 03:59:38,381 | INFO     | [monitor] control thread has ended
[2026-01-09 22:59:44] 2026-01-10 03:59:43,042 | INFO     | all workflow threads have been joined
[2026-01-09 22:59:44] 2026-01-10 03:59:43,043 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:59:44] 2026-01-10 03:59:43,043 | INFO     | traces error code: 0
[2026-01-09 22:59:44] 2026-01-10 03:59:43,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:59:44] 2026-01-10 03:59:43,449 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:59:44] 2026-01-10 03:59:43,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:59:44] 2026-01-10 03:59:43,454 [wrapper] pilotpid: 3358625
[2026-01-09 22:59:44] 2026-01-10 03:59:43,456 [wrapper] Pilot exit status: 0
[2026-01-09 22:59:44] 2026-01-10 03:59:43,542 [wrapper] pandaids: 6963161743
[2026-01-09 22:59:44] 2026-01-10 03:59:44,120 [wrapper] cleanup supervisor_pilot 3806381 3358626
[2026-01-09 22:59:44] 2026-01-10 03:59:44,154 [wrapper] Test setup, not cleaning
[2026-01-09 22:59:44] 2026-01-10 03:59:44,189 [wrapper] apfmon messages muted
[2026-01-09 22:59:44] 2026-01-10 03:59:44,216 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:59:44] 2026-01-10 03:59:44,240 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:59:44]  *** Error codes and diagnostics ***
[2026-01-09 22:59:44]     "exeErrorCode": 0,
[2026-01-09 22:59:44]     "exeErrorDiag": "",
[2026-01-09 22:59:44]     "pilotErrorCode": 0,
[2026-01-09 22:59:44]     "pilotErrorDiag": "",
[2026-01-09 22:59:44]  *** Listing of results directory ***
[2026-01-09 22:59:44] total 437728
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 22:59:44] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:59:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:51 run_atlas
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:51 job.xml
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas 223990925 Jan  9 19:51 EVNT.47898824._001225.pool.root.1
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:51 start_atlas.sh
[2026-01-09 22:59:44] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:51 shared
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 19:51 input.tar.gz
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:51 boinc_lockfile
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 19:51 pandaJob.out
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas        57 Jan  9 19:51 setup.sh.local
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas    989374 Jan  9 19:52 agis_schedconf.cvmfs.json
[2026-01-09 22:59:44] drwx------. 5 boincer umatlas      4096 Jan  9 19:52 pilot3
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas      6875 Jan  9 22:55 init_data.xml
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas 216512678 Jan  9 22:56 HITS.47898826._033400.pool.root.1
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas       530 Jan  9 22:56 boinc_task_state.xml
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas      1042 Jan  9 22:58 memory_monitor_summary.json
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas    445193 Jan  9 22:58 log.47898826._033400.job.log.tgz.1
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas        95 Jan  9 22:58 pilot_heartbeat.json
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas      7826 Jan  9 22:58 heartbeat.json
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:59 boinc_mmap_file
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:59 wrapper_checkpoint.txt
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas      5010 Jan  9 22:59 pilotlog.txt
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas   1460213 Jan  9 22:59 log.47898826._033400.job.log.1
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas       357 Jan  9 22:59 output.list
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:59 runtime_log
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas   1925120 Jan  9 22:59 result.tar.gz
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas      9350 Jan  9 22:59 runtime_log.err
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas       656 Jan  9 22:59 BydMDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIWlKDmm7haMn.diag
[2026-01-09 22:59:44] -rw-r--r--. 1 boincer umatlas     21257 Jan  9 22:59 stderr.txt
[2026-01-09 22:59:44] HITS file was successfully produced:
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas 216512678 Jan  9 22:56 shared/HITS.pool.root.1
[2026-01-09 22:59:44]  *** Contents of shared directory: ***
[2026-01-09 22:59:44] total 432668
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas 223990925 Jan  9 19:51 ATLAS.root_0
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:51 start_atlas.sh
[2026-01-09 22:59:44] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 19:51 input.tar.gz
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas 216512678 Jan  9 22:56 HITS.pool.root.1
[2026-01-09 22:59:44] -rw-------. 1 boincer umatlas   1925120 Jan  9 22:59 result.tar.gz
22:59:46 (3354198): run_atlas exited; CPU time 57587.991546
22:59:46 (3354198): called boinc_finish(0)

</stderr_txt>
]]>

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