Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:46:47 (15244): wrapper (7.7.26015): starting
15:46:47 (15244): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 15:46:47] Arguments: --nthreads 12
[2026-01-09 15:46:47] Threads: 12
[2026-01-09 15:46:47] Checking for CVMFS
[2026-01-09 15:46:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:46:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:46:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:46:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:46:47] 2.11.2.0 3165 137161 98312 154956 1 57 14331541 20275200 1 130560 0 51081588 99.888 8136522 40759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 15:46:47] CVMFS is ok
[2026-01-09 15:46:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:46:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:46:47] Further information can be found at the LHC@home message board.
[2026-01-09 15:46:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:46:47] Checking for apptainer binary...
[2026-01-09 15:46:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:46:47] Running /usr/bin/apptainer --version
[2026-01-09 15:46:47] apptainer version 1.3.2-1.el7
[2026-01-09 15:46:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:46:49] c-115-40.aglt2.org
[2026-01-09 15:46:49] apptainer works
[2026-01-09 15:46:49] Set ATHENA_PROC_NUMBER=12
[2026-01-09 15:46:49] Set ATHENA_CORE_NUMBER=12
[2026-01-09 15:46:49] Starting ATLAS job with PandaID=6963162112
[2026-01-09 15:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:21:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:21:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 17:21:35]  replicas=None
[2026-01-09 17:21:35]  scope=mc23_13p6TeV
[2026-01-09 17:21:35]  status=None
[2026-01-09 17:21:35]  status_code=0
[2026-01-09 17:21:35]  storage_token=
[2026-01-09 17:21:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963162112/log.47898826._033739.job.log.tgz.1
[2026-01-09 17:21:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/f8/log.47898826._033739.job.log.tgz.1
[2026-01-09 17:21:35]  workdir=None
[2026-01-09 17:21:35] ]
[2026-01-09 17:21:35] 2026-01-09 22:20:53,426 | INFO     | transferring file log.47898826._033739.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963162112/log.47898826._033739.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 17:21:35] 2026-01-09 22:20:53,426 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963162112/log.47898826._033739.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._033739.job
[2026-01-09 17:21:35] 2026-01-09 22:20:53,449 | INFO     | adding to output.list: log.47898826._033739.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/f8/log.47898826._033739.job.log.tg
[2026-01-09 17:21:35] 2026-01-09 22:20:53,450 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 17:21:35] 2026-01-09 22:20:53,450 | INFO     | summary of transferred files:
[2026-01-09 17:21:35] 2026-01-09 22:20:53,450 | INFO     |  -- lfn=log.47898826._033739.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 17:21:35] 2026-01-09 22:20:53,450 | INFO     | stage-out finished correctly
[2026-01-09 17:21:35] 2026-01-09 22:20:53,540 | INFO     | time since job start (5629s) is within the limit (349056.0s)
[2026-01-09 17:21:35] 2026-01-09 22:20:54,612 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 17:21:35] 2026-01-09 22:20:55,545 | INFO     | time since job start (5631s) is within the limit (349056.0s)
[2026-01-09 17:21:35] 2026-01-09 22:20:57,535 | INFO     | job 6963162112 has state=finished
[2026-01-09 17:21:35] 2026-01-09 22:20:57,536 | INFO     | preparing for final server update for job 6963162112 in state='finished'
[2026-01-09 17:21:35] 2026-01-09 22:20:57,536 | INFO     | this job has now completed (state=finished)
[2026-01-09 17:21:35] 2026-01-09 22:20:57,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 17:21:35] 2026-01-09 22:20:57,537 | INFO     | log transfer has been attempted: DONE
[2026-01-09 17:21:35] 2026-01-09 22:20:57,537 | INFO     | job 6963162112 has finished - writing final server update
[2026-01-09 17:21:35] 2026-01-09 22:20:57,537 | INFO     | total number of processed events: 400 (read)
[2026-01-09 17:21:35] 2026-01-09 22:20:57,539 | INFO     | executing command: lscpu
[2026-01-09 17:21:35] 2026-01-09 22:20:57,552 | INFO     | time since job start (5633s) is within the limit (349056.0s)
[2026-01-09 17:21:35] 2026-01-09 22:20:57,578 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 17:21:35] 2026-01-09 22:20:59,325 | WARNING  | process 25437 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 17:21:35] 2026-01-09 22:20:59,325 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162112/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:21:35] 2026-01-09 22:20:59,414 | INFO     | number of running child processes to parent process 25437: 1
[2026-01-09 17:21:35] 2026-01-09 22:20:59,414 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:21:35] 2026-01-09 22:20:59,558 | INFO     | time since job start (5635s) is within the limit (349056.0s)
[2026-01-09 17:21:35] 2026-01-09 22:21:01,563 | INFO     | time since job start (5637s) is within the limit (349056.0s)
[2026-01-09 17:21:35] 2026-01-09 22:21:01,916 | INFO     | monitor loop #420: job 0:6963162112 is in state 'finished'
[2026-01-09 17:21:35] 2026-01-09 22:21:01,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,081 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 17:21:35] 2026-01-09 22:21:02,084 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 17:21:35] 2026-01-09 22:21:02,085 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162112/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,086 | INFO     | extracted standard info from prmon json
[2026-01-09 17:21:35] 2026-01-09 22:21:02,086 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:21:35] 2026-01-09 22:21:02,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:21:35] 2026-01-09 22:21:02,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:21:35] 2026-01-09 22:21:02,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:21:35] 2026-01-09 22:21:02,088 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:21:35] 2026-01-09 22:21:02,088 | INFO     | sum of square deviations: 190403570.0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | sum of deviations: -6849889714.000001
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | mean x: 1767994519.0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | mean y: 2753377.4470588234
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | intersect: 63607482375.47204
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | chi2: 0.13557443977745237
[2026-01-09 17:21:35] 2026-01-09 22:21:02,089 | INFO     | current memory leak: -35.98 B/s (using 85 data points, chi2=0.14)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | could have reported an average CPU frequency of 2218 MHz (7 samples)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | ..............................
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . Timing measurements:
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . get job = 0 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . initial setup = 2 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . payload setup = 7 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . stage-in = 0 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . payload execution = 5602 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,090 | INFO     | . stage-out = 0 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,091 | INFO     | . log creation = 0 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,091 | INFO     | ..............................
[2026-01-09 17:21:35] 2026-01-09 22:21:02,163 | INFO     | 
[2026-01-09 17:21:35] 2026-01-09 22:21:02,163 | INFO     | job summary report
[2026-01-09 17:21:35] 2026-01-09 22:21:02,163 | INFO     | --------------------------------------------------
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | PanDA job id: 6963162112
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | task id: 47898826
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | errors: (none)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | pilot state: finished 
[2026-01-09 17:21:35] 2026-01-09 22:21:02,164 | INFO     | transexitcode: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | exeerrorcode: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | exeerrordiag: 
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | exitcode: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | exitmsg: OK
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | cpuconsumptiontime: 60296 s
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | nevents: 400
[2026-01-09 17:21:35] 2026-01-09 22:21:02,165 | INFO     | neventsw: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | pid: 25437
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | pgrp: 25437
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | corecount: 12
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | event service: False
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | sizes: {0: 2283143, 1: 2283999, 6: 2284261, 12: 2284289, 5613: 2310873, 5614: 2319871, 5615: 2320055, 5623: 2320249}
[2026-01-09 17:21:35] 2026-01-09 22:21:02,166 | INFO     | --------------------------------------------------
[2026-01-09 17:21:35] 2026-01-09 22:21:02,167 | INFO     | 
[2026-01-09 17:21:35] 2026-01-09 22:21:02,167 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 17:21:35] 2026-01-09 22:21:02,190 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,190 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | job 6963162112 has completed (purged errors)
[2026-01-09 17:21:35] 2026-01-09 22:21:02,193 | INFO     | overall cleanup function is called
[2026-01-09 17:21:35] 2026-01-09 22:21:03,201 | INFO     | --- collectZombieJob: --- 10, [25437]
[2026-01-09 17:21:35] 2026-01-09 22:21:03,201 | INFO     | zombie collector waiting for pid 25437
[2026-01-09 17:21:35] 2026-01-09 22:21:03,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:21:35] 2026-01-09 22:21:03,201 | INFO     | collected zombie processes
[2026-01-09 17:21:35] 2026-01-09 22:21:03,202 | INFO     | will attempt to kill all subprocesses of pid=25437
[2026-01-09 17:21:35] 2026-01-09 22:21:03,289 | INFO     | process IDs to be killed: [25437] (in reverse order)
[2026-01-09 17:21:35] 2026-01-09 22:21:03,341 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:21:35] 2026-01-09 22:21:03,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:21:35] 2026-01-09 22:21:03,344 | INFO     | did not find any defunct processes belonging to 25437
[2026-01-09 17:21:35] 2026-01-09 22:21:03,346 | INFO     | did not find any defunct processes belonging to 25437
[2026-01-09 17:21:35] 2026-01-09 22:21:03,347 | INFO     | ready for new job
[2026-01-09 17:21:35] 2026-01-09 22:21:03,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:21:35] 2026-01-09 22:21:03,348 | INFO     | ***************************************
[2026-01-09 17:21:35] 2026-01-09 22:21:03,348 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:21:35] 2026-01-09 22:21:03,348 | INFO     | ***************************************
[2026-01-09 17:21:35] 2026-01-09 22:21:03,348 | INFO     | 
[2026-01-09 17:21:35] 2026-01-09 22:21:03,349 | INFO     | architecture information:
[2026-01-09 17:21:35] 2026-01-09 22:21:03,349 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:21:35] 2026-01-09 22:21:03,364 | INFO     | cat /etc/os-release:
[2026-01-09 17:21:35] NAME="CentOS Linux"
[2026-01-09 17:21:35] VERSION="7 (Core)"
[2026-01-09 17:21:35] ID="centos"
[2026-01-09 17:21:35] ID_LIKE="rhel fedora"
[2026-01-09 17:21:35] VERSION_ID="7"
[2026-01-09 17:21:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:21:35] ANSI_COLOR="0;31"
[2026-01-09 17:21:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:21:35] HOME_URL="https://www.centos.org/"
[2026-01-09 17:21:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:21:35] 
[2026-01-09 17:21:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:21:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:21:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:21:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:21:35] 
[2026-01-09 17:21:35] 2026-01-09 22:21:03,364 | INFO     | ***************************************
[2026-01-09 17:21:35] 2026-01-09 22:21:03,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 17:21:35] 2026-01-09 22:21:03,883 | INFO     | sufficient remaining disk space (18656264192 B)
[2026-01-09 17:21:35] 2026-01-09 22:21:03,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:21:35] 2026-01-09 22:21:03,884 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:21:35] 2026-01-09 22:21:03,884 | INFO     | update_server=False
[2026-01-09 17:21:35] 2026-01-09 22:21:03,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:21:35] 2026-01-09 22:21:03,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:21:35] 2026-01-09 22:21:03,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:21:35] 2026-01-09 22:21:03,885 | INFO     | aborting loop
[2026-01-09 17:21:35] 2026-01-09 22:21:04,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:21:35] 2026-01-09 22:21:04,137 | INFO     | all payload control threads have been joined
[2026-01-09 17:21:35] 2026-01-09 22:21:04,429 | INFO     | all data control threads have been joined
[2026-01-09 17:21:35] 2026-01-09 22:21:04,485 | INFO     | all job control threads have been joined
[2026-01-09 17:21:35] 2026-01-09 22:21:04,890 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:04,890 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:04,891 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:04,947 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,062 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,143 | INFO     | [payload] control thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:21:35] 2026-01-09 22:21:05,434 | INFO     | [data] control thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,491 | INFO     | [job] control thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,678 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,782 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:05,825 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:06,046 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:06,267 | INFO     | [job] validate thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:06,281 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:09,196 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:12,175 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:21:35] 2026-01-09 22:21:14,226 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:21:35] 2026-01-09 22:21:15,231 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:21:35] 2026-01-09 22:21:15,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713450813248)>', '<ExcThread(monitor, started 139712752752384)>']
[2026-01-09 17:21:35] 2026-01-09 22:21:20,361 | INFO     | all workflow threads have been joined
[2026-01-09 17:21:35] 2026-01-09 22:21:20,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:21:35] 2026-01-09 22:21:20,361 | INFO     | traces error code: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:20,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:21:35] 2026-01-09 22:21:34,766 | INFO     | PID=18928 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 17:21:35] 2026-01-09 22:21:34,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:21:35] 2026-01-09 22:21:34,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:21:35] 2026-01-09 22:21:34,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:21:35] 2026-01-09 22:21:34,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:21:35] 2026-01-09 22:21:34,767 | INFO     | [monitor] control thread has ended
[2026-01-09 17:21:35] 2026-01-09 22:21:34,841 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:21:35] 2026-01-09 22:21:34,846 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:21:35] 2026-01-09 22:21:34,850 [wrapper] pilotpid: 18928
[2026-01-09 17:21:35] 2026-01-09 22:21:34,854 [wrapper] Pilot exit status: 0
[2026-01-09 17:21:35] 2026-01-09 22:21:34,869 [wrapper] pandaids: 6963162112
[2026-01-09 17:21:35] 2026-01-09 22:21:34,909 [wrapper] cleanup supervisor_pilot  4214 18929
[2026-01-09 17:21:35] 2026-01-09 22:21:34,913 [wrapper] Test setup, not cleaning
[2026-01-09 17:21:35] 2026-01-09 22:21:34,916 [wrapper] apfmon messages muted
[2026-01-09 17:21:35] 2026-01-09 22:21:34,920 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:21:35] 2026-01-09 22:21:34,924 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:21:35]  *** Error codes and diagnostics ***
[2026-01-09 17:21:35]     "exeErrorCode": 0,
[2026-01-09 17:21:35]     "exeErrorDiag": "",
[2026-01-09 17:21:35]     "pilotErrorCode": 0,
[2026-01-09 17:21:35]     "pilotErrorDiag": "",
[2026-01-09 17:21:35]  *** Listing of results directory ***
[2026-01-09 17:21:35] total 438308
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 17:21:35] -rwx------ 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas       100 Jan  9 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:21:35] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 15:46 run_atlas
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas       105 Jan  9 15:46 job.xml
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas 224920926 Jan  9 15:46 EVNT.47898824._001238.pool.root.1
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 15:46 start_atlas.sh
[2026-01-09 17:21:35] drwxrwx--x 2 boincer umatlas      4096 Jan  9 15:46 shared
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas    592407 Jan  9 15:46 input.tar.gz
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas         0 Jan  9 15:46 boinc_lockfile
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 15:46 pandaJob.out
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas        57 Jan  9 15:46 setup.sh.local
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas    989381 Jan  9 15:47 agis_schedconf.cvmfs.json
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas   1516240 Jan  9 15:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:21:35] drwx------ 5 boincer umatlas      4096 Jan  9 15:47 pilot3
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 17:09 init_data.xml
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas 217573300 Jan  9 17:20 HITS.47898826._033739.pool.root.1
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas       529 Jan  9 17:20 boinc_task_state.xml
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas      1046 Jan  9 17:20 memory_monitor_summary.json
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas    402373 Jan  9 17:20 log.47898826._033739.job.log.tgz.1
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas      7850 Jan  9 17:21 heartbeat.json
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 17:21 boinc_mmap_file
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas        27 Jan  9 17:21 wrapper_checkpoint.txt
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas       745 Jan  9 17:21 pilotlog.txt
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas        95 Jan  9 17:21 pilot_heartbeat.json
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas    806859 Jan  9 17:21 log.47898826._033739.job.log.1
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas       357 Jan  9 17:21 output.list
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas       620 Jan  9 17:21 runtime_log
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas   1228800 Jan  9 17:21 result.tar.gz
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 17:21 runtime_log.err
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas       659 Jan  9 17:21 3mUNDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCelKDmGg0Ylm.diag
[2026-01-09 17:21:35] -rw-r--r-- 1 boincer umatlas     21921 Jan  9 17:21 stderr.txt
[2026-01-09 17:21:35] HITS file was successfully produced:
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas 217573300 Jan  9 17:20 shared/HITS.pool.root.1
[2026-01-09 17:21:35]  *** Contents of shared directory: ***
[2026-01-09 17:21:35] total 433932
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas 224920926 Jan  9 15:46 ATLAS.root_0
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 15:46 start_atlas.sh
[2026-01-09 17:21:35] -rw-r--r-- 2 boincer umatlas    592407 Jan  9 15:46 input.tar.gz
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas 217573300 Jan  9 17:20 HITS.pool.root.1
[2026-01-09 17:21:35] -rw------- 1 boincer umatlas   1228800 Jan  9 17:21 result.tar.gz
17:21:36 (15244): run_atlas exited; CPU time 60255.379194
17:21:36 (15244): called boinc_finish(0)

</stderr_txt>
]]>

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