Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (28537): wrapper (7.7.26015): starting
00:02:45 (28537): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:02:45] Arguments: --nthreads 8
[2026-01-10 00:02:45] Threads: 8
[2026-01-10 00:02:45] Checking for CVMFS
[2026-01-10 00:02:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:02:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:02:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:02:45] 2.11.0.0 4034 52666 61748 154959 1 188 3210351 4096001 1790 130560 1 1645530 99.255 2528935 460 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 00:02:45] CVMFS is ok
[2026-01-10 00:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:02:45] Further information can be found at the LHC@home message board.
[2026-01-10 00:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:02:45] Checking for apptainer binary...
[2026-01-10 00:02:45] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 00:02:45] apptainer is not installed, using version from CVMFS
[2026-01-10 00:02:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:02:46] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009672/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node412
[2026-01-10 00:02:46] apptainer works
[2026-01-10 00:02:46] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:02:46] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:02:46] Starting ATLAS job with PandaID=6963194296
[2026-01-10 00:02:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009672/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:13:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:13:03]  is_tar=False
[2026-01-10 01:13:03]  lfn=log.47898826._039359.job.log.tgz.1
[2026-01-10 01:13:03]  mtime=0
[2026-01-10 01:13:03]  protocol_id=None
[2026-01-10 01:13:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 01:13:03]  replicas=None
[2026-01-10 01:13:03]  scope=mc23_13p6TeV
[2026-01-10 01:13:03]  status=None
[2026-01-10 01:13:03]  status_code=0
[2026-01-10 01:13:03]  storage_token=
[2026-01-10 01:13:03]  surl=/tmp/job_11009672/atlas/pilot/slots/0/PanDA_Pilot-6963194296/log.47898826._039359.job.log.tgz.1
[2026-01-10 01:13:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/22/log.47898826._039359.job.log.tgz.1
[2026-01-10 01:13:03]  workdir=None
[2026-01-10 01:13:03] ]
[2026-01-10 01:13:03] 2026-01-10 00:12:00,241 | INFO     | transferring file log.47898826._039359.job.log.tgz.1 from /tmp/job_11009672/atlas/pilot/slots/0/PanDA_Pilot-6963194296/log.47898826._039359.job.log.tgz.1 to /tmp/j
[2026-01-10 01:13:03] 2026-01-10 00:12:00,241 | INFO     | executing command: /usr/bin/env mv /tmp/job_11009672/atlas/pilot/slots/0/PanDA_Pilot-6963194296/log.47898826._039359.job.log.tgz.1 /tmp/job_11009672/atlas/pilot/sl
[2026-01-10 01:13:03] 2026-01-10 00:12:00,249 | INFO     | adding to output.list: log.47898826._039359.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/22/log.47898826._039359.job.log.tg
[2026-01-10 01:13:03] 2026-01-10 00:12:00,250 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 01:13:03] 2026-01-10 00:12:00,250 | INFO     | summary of transferred files:
[2026-01-10 01:13:03] 2026-01-10 00:12:00,250 | INFO     |  -- lfn=log.47898826._039359.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 01:13:03] 2026-01-10 00:12:00,250 | INFO     | stage-out finished correctly
[2026-01-10 01:13:03] 2026-01-10 00:12:01,321 | INFO     | time since job start (4151s) is within the limit (349056.0s)
[2026-01-10 01:13:03] 2026-01-10 00:12:01,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 01:13:03] 2026-01-10 00:12:01,620 | INFO     | monitor loop #308: job 0:6963194296 is in state 'finished'
[2026-01-10 01:13:03] 2026-01-10 00:12:01,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:13:03] 2026-01-10 00:12:02,445 | INFO     | PID=32319 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | job 6963194296 has state=finished
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | preparing for final server update for job 6963194296 in state='finished'
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | this job has now completed (state=finished)
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | log transfer has been attempted: DONE
[2026-01-10 01:13:03] 2026-01-10 00:12:03,401 | INFO     | job 6963194296 has finished - writing final server update
[2026-01-10 01:13:03] 2026-01-10 00:12:03,402 | INFO     | total number of processed events: 400 (read)
[2026-01-10 01:13:03] 2026-01-10 00:12:03,402 | INFO     | executing command: lscpu
[2026-01-10 01:13:03] 2026-01-10 00:12:03,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 01:13:03] 2026-01-10 00:12:03,446 | INFO     | time since job start (4153s) is within the limit (349056.0s)
[2026-01-10 01:13:03] 2026-01-10 00:12:04,122 | INFO     | monitor loop #309: job 0:6963194296 is in state 'finished'
[2026-01-10 01:13:03] 2026-01-10 00:12:04,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,258 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 01:13:03] 2026-01-10 00:12:05,274 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2426.2183125
[2026-01-10 01:13:03] 2026-01-10 00:12:05,292 | INFO     | using path: /tmp/job_11009672/atlas/pilot/slots/0/PanDA_Pilot-6963194296/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,292 | INFO     | extracted standard info from prmon json
[2026-01-10 01:13:03] 2026-01-10 00:12:05,292 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:13:03] 2026-01-10 00:12:05,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:13:03] 2026-01-10 00:12:05,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:13:03] 2026-01-10 00:12:05,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | sum of square deviations: 70364110.0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | sum of deviations: 1012523567.0000004
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | mean x: 1768001924.0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | mean y: 2527543.918032787
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | intersect: -25438618724.418816
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | chi2: 0.00013554324671493569
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | current memory leak: 14.39 B/s (using 61 data points, chi2=0.00)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | could have reported an average CPU frequency of 2549 MHz (6 samples)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | ..............................
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | . Timing measurements:
[2026-01-10 01:13:03] 2026-01-10 00:12:05,294 | INFO     | . get job = 0 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . initial setup = 1 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . payload setup = 2 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . stage-in = 0 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . payload execution = 4131 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . stage-out = 0 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | . log creation = 0 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,295 | INFO     | ..............................
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | 
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | job summary report
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | --------------------------------------------------
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | PanDA job id: 6963194296
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | task id: 47898826
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | errors: (none)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,344 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | pilot state: finished 
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | transexitcode: 0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | exeerrorcode: 0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | exeerrordiag: 
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | exitcode: 0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | exitmsg: OK
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | cpuconsumptiontime: 28045 s
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | nevents: 400
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | neventsw: 0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | pid: 6791
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | pgrp: 6791
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | corecount: 8
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | event service: False
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | sizes: {0: 2283759, 1: 2284125, 2: 2284387, 11: 2284415, 4136: 2310475, 4137: 2319686, 4138: 2319686, 4142: 2319880}
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | --------------------------------------------------
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | 
[2026-01-10 01:13:03] 2026-01-10 00:12:05,345 | INFO     | executing command: ls -lF /tmp/job_11009672/atlas/pilot/slots/0
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | job 6963194296 has completed (purged errors)
[2026-01-10 01:13:03] 2026-01-10 00:12:05,355 | INFO     | overall cleanup function is called
[2026-01-10 01:13:03] 2026-01-10 00:12:06,361 | INFO     | --- collectZombieJob: --- 10, [6791]
[2026-01-10 01:13:03] 2026-01-10 00:12:06,361 | INFO     | zombie collector waiting for pid 6791
[2026-01-10 01:13:03] 2026-01-10 00:12:06,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:13:03] 2026-01-10 00:12:06,361 | INFO     | collected zombie processes
[2026-01-10 01:13:03] 2026-01-10 00:12:06,361 | INFO     | will attempt to kill all subprocesses of pid=6791
[2026-01-10 01:13:03] 2026-01-10 00:12:06,451 | INFO     | process IDs to be killed: [6791] (in reverse order)
[2026-01-10 01:13:03] 2026-01-10 00:12:06,481 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:13:03] 2026-01-10 00:12:06,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:13:03] 2026-01-10 00:12:06,484 | INFO     | did not find any defunct processes belonging to 6791
[2026-01-10 01:13:03] 2026-01-10 00:12:06,487 | INFO     | did not find any defunct processes belonging to 6791
[2026-01-10 01:13:03] 2026-01-10 00:12:06,487 | INFO     | ready for new job
[2026-01-10 01:13:03] 2026-01-10 00:12:06,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:13:03] 2026-01-10 00:12:06,488 | INFO     | ***************************************
[2026-01-10 01:13:03] 2026-01-10 00:12:06,488 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:13:03] 2026-01-10 00:12:06,488 | INFO     | ***************************************
[2026-01-10 01:13:03] 2026-01-10 00:12:06,488 | INFO     | 
[2026-01-10 01:13:03] 2026-01-10 00:12:06,503 | INFO     | architecture information:
[2026-01-10 01:13:03] 2026-01-10 00:12:06,503 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:13:03] 2026-01-10 00:12:06,508 | INFO     | cat /etc/os-release:
[2026-01-10 01:13:03] NAME="CentOS Linux"
[2026-01-10 01:13:03] VERSION="7 (Core)"
[2026-01-10 01:13:03] ID="centos"
[2026-01-10 01:13:03] ID_LIKE="rhel fedora"
[2026-01-10 01:13:03] VERSION_ID="7"
[2026-01-10 01:13:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:13:03] ANSI_COLOR="0;31"
[2026-01-10 01:13:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:13:03] HOME_URL="https://www.centos.org/"
[2026-01-10 01:13:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:13:03] 
[2026-01-10 01:13:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:13:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:13:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:13:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:13:03] 
[2026-01-10 01:13:03] 2026-01-10 00:12:06,508 | INFO     | ***************************************
[2026-01-10 01:13:03] 2026-01-10 00:12:07,011 | INFO     | executing command: df -mP /tmp/job_11009672/atlas/pilot/slots/0
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | INFO     | sufficient remaining disk space (226924429312 B)
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | INFO     | update_server=False
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:13:03] 2026-01-10 00:12:07,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:13:03] 2026-01-10 00:12:07,413 | INFO     | all job control threads have been joined
[2026-01-10 01:13:03] 2026-01-10 00:12:07,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:13:03] 2026-01-10 00:12:07,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:13:03] 2026-01-10 00:12:07,630 | INFO     | aborting loop
[2026-01-10 01:13:03] 2026-01-10 00:12:07,821 | INFO     | all data control threads have been joined
[2026-01-10 01:13:03] 2026-01-10 00:12:08,022 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,023 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,095 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,147 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:13:03] 2026-01-10 00:12:08,344 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,398 | INFO     | all payload control threads have been joined
[2026-01-10 01:13:03] 2026-01-10 00:12:08,418 | INFO     | [job] control thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,635 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,788 | INFO     | [job] validate thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,806 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:08,827 | INFO     | [data] control thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:09,204 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:09,291 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:09,403 | INFO     | [payload] control thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:10,322 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:11,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:17,332 | INFO     | job.realtimelogging is not enabled
[2026-01-10 01:13:03] 2026-01-10 00:12:18,337 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:13:03] 2026-01-10 00:12:36,625 | INFO     | PID=32319 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 01:13:03] 2026-01-10 00:12:36,625 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:13:03] 2026-01-10 00:12:36,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:13:03] 2026-01-10 00:12:36,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:13:03] 2026-01-10 00:12:56,989 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:13:03] 2026-01-10 00:12:58,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062920448)>']
[2026-01-10 01:13:03] 2026-01-10 00:12:58,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:13:03] 2026-01-10 00:12:58,736 | INFO     | [monitor] control thread has ended
[2026-01-10 01:13:03] 2026-01-10 00:13:03,591 | INFO     | all workflow threads have been joined
[2026-01-10 01:13:03] 2026-01-10 00:13:03,591 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:13:03] 2026-01-10 00:13:03,591 | INFO     | traces error code: 0
[2026-01-10 01:13:03] 2026-01-10 00:13:03,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:13:03] 2026-01-10 00:13:03,644 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:13:03] 2026-01-10 00:13:03,646 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:13:03] 2026-01-10 00:13:03,647 [wrapper] pilotpid: 32319
[2026-01-10 01:13:03] 2026-01-10 00:13:03,648 [wrapper] Pilot exit status: 0
[2026-01-10 01:13:03] 2026-01-10 00:13:03,652 [wrapper] pandaids: 6963194296
[2026-01-10 01:13:03] 2026-01-10 00:13:03,671 [wrapper] cleanup supervisor_pilot  5269 32320
[2026-01-10 01:13:03] 2026-01-10 00:13:03,672 [wrapper] Test setup, not cleaning
[2026-01-10 01:13:03] 2026-01-10 00:13:03,674 [wrapper] apfmon messages muted
[2026-01-10 01:13:03] 2026-01-10 00:13:03,675 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:13:03] 2026-01-10 00:13:03,676 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:13:03]  *** Error codes and diagnostics ***
[2026-01-10 01:13:03]     "exeErrorCode": 0,
[2026-01-10 01:13:03]     "exeErrorDiag": "",
[2026-01-10 01:13:03]     "pilotErrorCode": 0,
[2026-01-10 01:13:03]     "pilotErrorDiag": "",
[2026-01-10 01:13:03]  *** Listing of results directory ***
[2026-01-10 01:13:03] total 433568
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 01:13:03] -rwx------ 1 mf493845 unix-user     36322 Jan  9 05:26 runpilot2-wrapper.sh
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      5112 Jan  9 05:30 queuedata.json
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user       100 Jan  9 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:13:03] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan  9 23:05 run_atlas
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user       105 Jan  9 23:05 job.xml
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user 223266981 Jan 10 00:02 EVNT.47898824._001513.pool.root.1
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 00:02 start_atlas.sh
[2026-01-10 01:13:03] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 00:02 shared
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user    592401 Jan 10 00:02 input.tar.gz
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      6390 Jan 10 00:02 init_data.xml
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user         0 Jan 10 00:02 boinc_setup_complete
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      8192 Jan 10 00:02 boinc_mmap_file
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user         0 Jan 10 00:02 boinc_lockfile
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      2520 Jan 10 00:02 pandaJob.out
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    989375 Jan 10 00:02 agis_schedconf.cvmfs.json
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user   1516240 Jan 10 00:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:13:03] drwx------ 5 mf493845 unix-user       440 Jan 10 00:02 pilot3
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user 214916227 Jan 10 01:11 HITS.47898826._039359.pool.root.1
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      1015 Jan 10 01:11 memory_monitor_summary.json
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    316405 Jan 10 01:12 log.47898826._039359.job.log.tgz.1
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      7767 Jan 10 01:12 heartbeat.json
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user        95 Jan 10 01:12 pilot_heartbeat.json
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      4832 Jan 10 01:13 pilotlog.txt
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    632456 Jan 10 01:13 log.47898826._039359.job.log.1
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user       357 Jan 10 01:13 output.list
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user       620 Jan 10 01:13 runtime_log
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    972800 Jan 10 01:13 result.tar.gz
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user      9220 Jan 10 01:13 runtime_log.err
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user       643 Jan 10 01:13 ro7LDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKDhKDmZFx6Fo.diag
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user     22185 Jan 10 01:13 stderr.txt
[2026-01-10 01:13:03] HITS file was successfully produced:
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user 214916227 Jan 10 01:11 shared/HITS.pool.root.1
[2026-01-10 01:13:03]  *** Contents of shared directory: ***
[2026-01-10 01:13:03] total 429464
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user 223266981 Jan 10 00:02 ATLAS.root_0
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 00:02 start_atlas.sh
[2026-01-10 01:13:03] -rw-r--r-- 2 mf493845 unix-user    592401 Jan 10 00:02 input.tar.gz
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user 214916227 Jan 10 01:11 HITS.pool.root.1
[2026-01-10 01:13:03] -rw------- 1 mf493845 unix-user    972800 Jan 10 01:13 result.tar.gz
01:13:04 (28537): run_atlas exited; CPU time 28096.841959
01:13:04 (28537): called boinc_finish(0)

</stderr_txt>
]]>

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