Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:14 (818980): wrapper (7.7.26015): starting
10:06:14 (818980): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 10:06:14] Arguments: --nthreads 3
[2026-01-10 10:06:14] Threads: 3
[2026-01-10 10:06:14] Checking for CVMFS
[2026-01-10 10:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:06:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:06:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:06:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:06:14] 2.9.2.0 197263 2937 84856 154973 2 57 32632141 36864000 0 130560 0 1592018 99.986 106859 5622 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 10:06:14] CVMFS is ok
[2026-01-10 10:06:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:06:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:06:14] Further information can be found at the LHC@home message board.
[2026-01-10 10:06:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:06:14] Checking for apptainer binary...
[2026-01-10 10:06:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:06:14] Running /usr/bin/apptainer --version
[2026-01-10 10:06:14] apptainer version 1.4.1-1.1
[2026-01-10 10:06:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:06:14] atlasA212
[2026-01-10 10:06:14] apptainer works
[2026-01-10 10:06:14] Set ATHENA_PROC_NUMBER=3
[2026-01-10 10:06:14] Set ATHENA_CORE_NUMBER=3
[2026-01-10 10:06:14] Starting ATLAS job with PandaID=6963161780
[2026-01-10 10:06:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:25:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:25:40] 2026-01-10 11:24:38,638 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:25:40] 2026-01-10 11:24:38,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:25:40] 2026-01-10 11:24:38,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:25:40] 2026-01-10 11:24:38,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | sum of square deviations: 779958810.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | sum of deviations: 9274934862.499998
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | mean x: 1768040119.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | mean y: 2336857.007352941
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | intersect: -21022436159.72312
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | chi2: 1.5095454281376104
[2026-01-10 12:25:40] 2026-01-10 11:24:38,640 | INFO     | sum of square deviations: 697054930.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | sum of deviations: 8941688172.000004
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | mean x: 1768039967.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | mean y: 2336243.717557252
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | intersect: -22677744450.277645
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | chi2: 1.5116204326556664
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | current chi2=1.5116204326556664 (change=-0.13745889851198442 %)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | right removable region: 130
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | sum of square deviations: 697054930.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | sum of deviations: -6069014135.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | mean x: 1768040272.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | mean y: 2364365.1603053436
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | intersect: 15396074301.358942
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | chi2: 0.10887218677413839
[2026-01-10 12:25:40] 2026-01-10 11:24:38,641 | INFO     | current chi2=0.10887218677413839 (change=92.78775022302848 %)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | sum of square deviations: 620244187.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | sum of deviations: 1080078870.9999993
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | mean x: 1768040424.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | mean y: 2350160.396825397
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | intersect: -3076474509.082757
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | chi2: 0.0017387854657468114
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | current chi2=0.0017387854657468114 (change=98.40291123264197 %)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | sum of deviations: 581232765.9999998
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | mean x: 1768040577.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | mean y: 2351227.0991735538
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | intersect: -1868492214.7608807
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | chi2: 0.001293037880616988
[2026-01-10 12:25:40] 2026-01-10 11:24:38,642 | INFO     | current chi2=0.001293037880616988 (change=25.635571144964338 %)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | sum of deviations: 283524004.49999976
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | mean x: 1768040729.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | mean y: 2351922.2327586208
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | intersect: -1033414873.3162777
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | chi2: 0.001127169887963812
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | current chi2=0.001127169887963812 (change=12.827775205938302 %)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | left removable region: 40
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | sum of square deviations: 226022842.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | sum of deviations: -425262476.0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | mean x: 1768041156.5
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | mean y: 2354010.8444444444
[2026-01-10 12:25:40] 2026-01-10 11:24:38,643 | INFO     | intersect: 3328927341.073638
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | chi2: 0.00046015176523868997
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | current memory leak: -1.88 B/s (using 90 data points, chi2=0.00)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | could have reported an average CPU frequency of 4436 MHz (8 samples)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | ..............................
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . Timing measurements:
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . get job = 0 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . initial setup = 1 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . payload setup = 3 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . stage-in = 0 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . payload execution = 8267 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . stage-out = 0 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | . log creation = 0 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,644 | INFO     | ..............................
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | 
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | job summary report
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | --------------------------------------------------
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | PanDA job id: 6963161780
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | task id: 47898826
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | errors: (none)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | pilot state: finished 
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | transexitcode: 0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | exeerrorcode: 0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | exeerrordiag: 
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | exitcode: 0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | exitmsg: OK
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | cpuconsumptiontime: 23987 s
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | nevents: 400
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | neventsw: 0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | pid: 829140
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | pgrp: 829140
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | corecount: 3
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | event service: False
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | sizes: {0: 2283973, 3: 2284235, 11: 2284263, 8273: 2312236, 8274: 2321240, 8277: 2321296, 8283: 2321618}
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | --------------------------------------------------
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | 
[2026-01-10 12:25:40] 2026-01-10 11:24:38,677 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | job 6963161780 has completed (purged errors)
[2026-01-10 12:25:40] 2026-01-10 11:24:38,694 | INFO     | overall cleanup function is called
[2026-01-10 12:25:40] 2026-01-10 11:24:39,700 | INFO     | --- collectZombieJob: --- 10, [829140]
[2026-01-10 12:25:40] 2026-01-10 11:24:39,700 | INFO     | zombie collector waiting for pid 829140
[2026-01-10 12:25:40] 2026-01-10 11:24:39,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:25:40] 2026-01-10 11:24:39,700 | INFO     | collected zombie processes
[2026-01-10 12:25:40] 2026-01-10 11:24:39,700 | INFO     | will attempt to kill all subprocesses of pid=829140
[2026-01-10 12:25:40] 2026-01-10 11:24:39,759 | INFO     | process IDs to be killed: [829140] (in reverse order)
[2026-01-10 12:25:40] 2026-01-10 11:24:39,791 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:25:40] 2026-01-10 11:24:39,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:25:40] 2026-01-10 11:24:39,793 | INFO     | did not find any defunct processes belonging to 829140
[2026-01-10 12:25:40] 2026-01-10 11:24:39,795 | INFO     | did not find any defunct processes belonging to 829140
[2026-01-10 12:25:40] 2026-01-10 11:24:39,795 | INFO     | ready for new job
[2026-01-10 12:25:40] 2026-01-10 11:24:39,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:25:40] 2026-01-10 11:24:39,796 | INFO     | ***************************************
[2026-01-10 12:25:40] 2026-01-10 11:24:39,796 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:25:40] 2026-01-10 11:24:39,796 | INFO     | ***************************************
[2026-01-10 12:25:40] 2026-01-10 11:24:39,796 | INFO     | 
[2026-01-10 12:25:40] 2026-01-10 11:24:39,796 | INFO     | architecture information:
[2026-01-10 12:25:40] 2026-01-10 11:24:39,797 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:25:40] 2026-01-10 11:24:39,808 | INFO     | cat /etc/os-release:
[2026-01-10 12:25:40] NAME="CentOS Linux"
[2026-01-10 12:25:40] VERSION="7 (Core)"
[2026-01-10 12:25:40] ID="centos"
[2026-01-10 12:25:40] ID_LIKE="rhel fedora"
[2026-01-10 12:25:40] VERSION_ID="7"
[2026-01-10 12:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:25:40] ANSI_COLOR="0;31"
[2026-01-10 12:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:25:40] HOME_URL="https://www.centos.org/"
[2026-01-10 12:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:25:40] 
[2026-01-10 12:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:25:40] 
[2026-01-10 12:25:40] 2026-01-10 11:24:39,808 | INFO     | ***************************************
[2026-01-10 12:25:40] 2026-01-10 11:24:40,310 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 12:25:40] 2026-01-10 11:24:40,322 | INFO     | sufficient remaining disk space (373025669120 B)
[2026-01-10 12:25:40] 2026-01-10 11:24:40,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | INFO     | update_server=False
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:25:40] 2026-01-10 11:24:40,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:25:40] 2026-01-10 11:24:40,346 | INFO     | all job control threads have been joined
[2026-01-10 12:25:40] 2026-01-10 11:24:40,577 | INFO     | all data control threads have been joined
[2026-01-10 12:25:40] 2026-01-10 11:24:40,797 | INFO     | all payload control threads have been joined
[2026-01-10 12:25:40] 2026-01-10 11:24:41,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:25:40] 2026-01-10 11:24:41,111 | INFO     | aborting loop
[2026-01-10 12:25:40] 2026-01-10 11:24:41,328 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,328 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,351 | INFO     | [job] control thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,582 | INFO     | [data] control thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,761 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:41,802 | INFO     | [payload] control thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,064 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,116 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,328 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,574 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,579 | INFO     | [job] validate thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,598 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,664 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:42,727 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:24:43,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:25:40] 2026-01-10 11:24:47,184 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:25:40] 2026-01-10 11:25:34,237 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:25:40] 2026-01-10 11:25:35,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572079093568)>', '<ExcThread(monitor, started 140570924152576)>']
[2026-01-10 12:25:40] 2026-01-10 11:25:36,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:25:40] 2026-01-10 11:25:36,603 | INFO     | [monitor] control thread has ended
[2026-01-10 12:25:40] 2026-01-10 11:25:40,752 | INFO     | all workflow threads have been joined
[2026-01-10 12:25:40] 2026-01-10 11:25:40,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:25:40] 2026-01-10 11:25:40,752 | INFO     | traces error code: 0
[2026-01-10 12:25:40] 2026-01-10 11:25:40,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:25:40] 2026-01-10 11:25:40,816 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:25:40] 2026-01-10 11:25:40,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:25:40] 2026-01-10 11:25:40,822 [wrapper] pilotpid: 822693
[2026-01-10 12:25:40] 2026-01-10 11:25:40,825 [wrapper] Pilot exit status: 0
[2026-01-10 12:25:40] 2026-01-10 11:25:40,834 [wrapper] pandaids: 6963161780
[2026-01-10 12:25:40] 2026-01-10 11:25:40,857 [wrapper] cleanup supervisor_pilot  846965 822694
[2026-01-10 12:25:40] 2026-01-10 11:25:40,860 [wrapper] Test setup, not cleaning
[2026-01-10 12:25:40] 2026-01-10 11:25:40,862 [wrapper] apfmon messages muted
[2026-01-10 12:25:40] 2026-01-10 11:25:40,866 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:25:40] 2026-01-10 11:25:40,868 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:25:40]  *** Error codes and diagnostics ***
[2026-01-10 12:25:40]     "exeErrorCode": 0,
[2026-01-10 12:25:40]     "exeErrorDiag": "",
[2026-01-10 12:25:40]     "pilotErrorCode": 0,
[2026-01-10 12:25:40]     "pilotErrorDiag": "",
[2026-01-10 12:25:40]  *** Listing of results directory ***
[2026-01-10 12:25:40] total 446788
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 12:25:40] -rwx------ 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc       100 Jan 10 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:25:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 10:06 run_atlas
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc       105 Jan 10 10:06 job.xml
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc 224871848 Jan 10 10:06 EVNT.47898824._001226.pool.root.1
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc    592399 Jan 10 10:06 input.tar.gz
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:06 start_atlas.sh
[2026-01-10 12:25:40] drwxrwx--x 2 boinc boinc      4096 Jan 10 10:06 shared
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:06 boinc_setup_complete
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc      6448 Jan 10 10:06 init_data.xml
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:06 boinc_lockfile
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc      2519 Jan 10 10:06 pandaJob.out
[2026-01-10 12:25:40] -rw------- 1 boinc boinc    989548 Jan 10 10:06 agis_schedconf.cvmfs.json
[2026-01-10 12:25:40] -rw------- 1 boinc boinc   1516240 Jan 10 10:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:25:40] drwx------ 5 boinc boinc      4096 Jan 10 10:06 pilot3
[2026-01-10 12:25:40] -rw------- 1 boinc boinc 225747396 Jan 10 12:24 HITS.47898826._033437.pool.root.1
[2026-01-10 12:25:40] -rw------- 1 boinc boinc        95 Jan 10 12:24 pilot_heartbeat.json
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc       529 Jan 10 12:24 boinc_task_state.xml
[2026-01-10 12:25:40] -rw------- 1 boinc boinc      1014 Jan 10 12:24 memory_monitor_summary.json
[2026-01-10 12:25:40] -rw------- 1 boinc boinc    301830 Jan 10 12:24 log.47898826._033437.job.log.tgz.1
[2026-01-10 12:25:40] -rw------- 1 boinc boinc      7749 Jan 10 12:24 heartbeat.json
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc        27 Jan 10 12:25 wrapper_checkpoint.txt
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc      8192 Jan 10 12:25 boinc_mmap_file
[2026-01-10 12:25:40] -rw------- 1 boinc boinc      4556 Jan 10 12:25 pilotlog.txt
[2026-01-10 12:25:40] -rw------- 1 boinc boinc   1186121 Jan 10 12:25 log.47898826._033437.job.log.1
[2026-01-10 12:25:40] -rw------- 1 boinc boinc       357 Jan 10 12:25 output.list
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc       620 Jan 10 12:25 runtime_log
[2026-01-10 12:25:40] -rw------- 1 boinc boinc   1505280 Jan 10 12:25 result.tar.gz
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc      8912 Jan 10 12:25 runtime_log.err
[2026-01-10 12:25:40] -rw------- 1 boinc boinc       665 Jan 10 12:25 R8wMDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYWlKDmzgUgfm.diag
[2026-01-10 12:25:40] -rw-r--r-- 1 boinc boinc     20813 Jan 10 12:25 stderr.txt
[2026-01-10 12:25:40] HITS file was successfully produced:
[2026-01-10 12:25:40] -rw------- 1 boinc boinc 225747396 Jan 10 12:24 shared/HITS.pool.root.1
[2026-01-10 12:25:40]  *** Contents of shared directory: ***
[2026-01-10 12:25:40] total 442140
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc 224871848 Jan 10 10:06 ATLAS.root_0
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc    592399 Jan 10 10:06 input.tar.gz
[2026-01-10 12:25:40] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:06 start_atlas.sh
[2026-01-10 12:25:40] -rw------- 1 boinc boinc 225747396 Jan 10 12:24 HITS.pool.root.1
[2026-01-10 12:25:40] -rw------- 1 boinc boinc   1505280 Jan 10 12:25 result.tar.gz
12:25:42 (818980): run_atlas exited; CPU time 24020.495835
12:25:42 (818980): called boinc_finish(0)

</stderr_txt>
]]>

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