Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:01 (1355910): wrapper (7.7.26015): starting
16:41:01 (1355910): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:41:01] Arguments: --nthreads 8
[2026-01-09 16:41:01] Threads: 8
[2026-01-09 16:41:01] Checking for CVMFS
[2026-01-09 16:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:41:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:41:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:41:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:41:03] 2.13.3.0 5210 54624 481048 154957 2 393 24742891 32935933 8506 16776704 0 121825050 99.455 166544020 32648 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:41:03] CVMFS is ok
[2026-01-09 16:41:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:41:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:41:03] Further information can be found at the LHC@home message board.
[2026-01-09 16:41:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:41:03] Checking for apptainer binary...
[2026-01-09 16:41:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:41:03] Running /usr/bin/apptainer --version
[2026-01-09 16:41:03] apptainer version 1.4.5-2.el9
[2026-01-09 16:41:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:41:04] c6-1-26-2.aglt2.org
[2026-01-09 16:41:04] apptainer works
[2026-01-09 16:41:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:41:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:41:04] Starting ATLAS job with PandaID=6963194359
[2026-01-09 16:41:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:07:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:07:55] 2026-01-10 02:07:17,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:07:55] 2026-01-10 02:07:18,422 | INFO     | PID=1360374 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:07:55] 2026-01-10 02:07:18,422 | INFO     | .. there are 10 such processes running
[2026-01-09 21:07:55] 2026-01-10 02:07:19,424 | INFO     | time since job start (15911s) is within the limit (349056.0s)
[2026-01-09 21:07:55] 2026-01-10 02:07:19,595 | INFO     | monitor loop #1101: job 0:6963194359 is in state 'finished'
[2026-01-09 21:07:55] 2026-01-10 02:07:19,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:07:55] 2026-01-10 02:07:21,433 | INFO     | time since job start (15913s) is within the limit (349056.0s)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,101 | INFO     | monitor loop #1102: job 0:6963194359 is in state 'finished'
[2026-01-09 21:07:55] 2026-01-10 02:07:22,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,241 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:07:55] 2026-01-10 02:07:22,248 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3003.519482142857
[2026-01-09 21:07:55] 2026-01-10 02:07:22,261 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963194359/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,266 | INFO     | extracted standard info from prmon json
[2026-01-09 21:07:55] 2026-01-10 02:07:22,266 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:07:55] 2026-01-10 02:07:22,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:07:55] 2026-01-10 02:07:22,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:07:55] 2026-01-10 02:07:22,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:07:55] 2026-01-10 02:07:22,278 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:07:55] 2026-01-10 02:07:22,279 | INFO     | sum of square deviations: 5387291394.586845
[2026-01-09 21:07:55] 2026-01-10 02:07:22,280 | INFO     | sum of deviations: 17616636205.82239
[2026-01-09 21:07:55] 2026-01-10 02:07:22,280 | INFO     | mean x: 1768002923.0965252
[2026-01-09 21:07:55] 2026-01-10 02:07:22,280 | INFO     | mean y: 2139210.247104247
[2026-01-09 21:07:55] 2026-01-10 02:07:22,280 | INFO     | intersect: -5779293800.47102
[2026-01-09 21:07:55] 2026-01-10 02:07:22,281 | INFO     | chi2: 3.4136137427288533
[2026-01-09 21:07:55] 2026-01-10 02:07:22,281 | INFO     | sum of square deviations: 5081274677.039393
[2026-01-09 21:07:55] 2026-01-10 02:07:22,284 | INFO     | sum of deviations: 29443468461.007862
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | mean x: 1768002770.5984251
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | mean y: 2144995.5196850393
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | intersect: -10242554833.504272
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | chi2: 2.774592870331442
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | current chi2=2.774592870331442 (change=18.719776769078035 %)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,285 | INFO     | right removable region: 253
[2026-01-09 21:07:55] 2026-01-10 02:07:22,286 | INFO     | sum of square deviations: 5081259427.039393
[2026-01-09 21:07:55] 2026-01-10 02:07:22,287 | INFO     | sum of deviations: -29049896910.0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,287 | INFO     | mean x: 1768003075.5984251
[2026-01-09 21:07:55] 2026-01-10 02:07:22,287 | INFO     | mean y: 2162344.0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,287 | INFO     | intersect: 10109953103.391
[2026-01-09 21:07:55] 2026-01-10 02:07:22,293 | INFO     | chi2: 1.4006227341827033
[2026-01-09 21:07:55] 2026-01-10 02:07:22,293 | INFO     | current chi2=1.4006227341827033 (change=58.96950153876984 %)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,293 | INFO     | sum of square deviations: 4787057127.686756
[2026-01-09 21:07:55] 2026-01-10 02:07:22,294 | INFO     | sum of deviations: -39867818622.84338
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | mean x: 1768003228.0963855
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | mean y: 2167912.951807229
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | intersect: 14726544527.27673
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | chi2: 1.2457847644550313
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | current chi2=1.2457847644550313 (change=11.054937632297086 %)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,295 | INFO     | left removable region: 20
[2026-01-09 21:07:55] 2026-01-10 02:07:22,296 | INFO     | sum of square deviations: 3922305875.107308
[2026-01-09 21:07:55] 2026-01-10 02:07:22,301 | INFO     | sum of deviations: -11449765327.965672
[2026-01-09 21:07:55] 2026-01-10 02:07:22,301 | INFO     | mean x: 1768003350.0901287
[2026-01-09 21:07:55] 2026-01-10 02:07:22,301 | INFO     | mean y: 2164860.188841202
[2026-01-09 21:07:55] 2026-01-10 02:07:22,301 | INFO     | intersect: 5163216573.687674
[2026-01-09 21:07:55] 2026-01-10 02:07:22,301 | INFO     | chi2: 0.48356384460837676
[2026-01-09 21:07:55] 2026-01-10 02:07:22,302 | INFO     | current memory leak: -2.92 B/s (using 233 data points, chi2=0.48)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,302 | INFO     | could have reported an average CPU frequency of 3035 MHz (12 samples)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,302 | INFO     | ..............................
[2026-01-09 21:07:55] 2026-01-10 02:07:22,302 | INFO     | . Timing measurements:
[2026-01-09 21:07:55] 2026-01-10 02:07:22,302 | INFO     | . get job = 0 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . initial setup = 4 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . payload setup = 37 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . stage-in = 0 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . payload execution = 15778 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . stage-out = 3 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | . log creation = 0 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,303 | INFO     | ..............................
[2026-01-09 21:07:55] 2026-01-10 02:07:22,474 | INFO     | 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | job summary report
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | --------------------------------------------------
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | PanDA job id: 6963194359
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | task id: 47898826
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | errors: (none)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | pilot state: finished 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | transexitcode: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | exeerrorcode: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | exeerrordiag: 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,476 | INFO     | exitcode: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | exitmsg: OK
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | cpuconsumptiontime: 54660 s
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | nevents: 400
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | neventsw: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | pid: 1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | pgrp: 1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | corecount: 8
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | event service: False
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 3: 2284027, 14: 2284055, 25: 2284083, 31: 2284501, 35: 2284529, 15818: 2316376, 15819: 2316375, 15823: 2325793, 15849: 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | --------------------------------------------------
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | 
[2026-01-09 21:07:55] 2026-01-10 02:07:22,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 21:07:55] 2026-01-10 02:07:22,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,791 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,791 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,791 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,793 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:07:55] 2026-01-10 02:07:22,793 | INFO     | job 6963194359 has completed (purged errors)
[2026-01-09 21:07:55] 2026-01-10 02:07:22,793 | INFO     | overall cleanup function is called
[2026-01-09 21:07:55] 2026-01-10 02:07:23,839 | INFO     | --- collectZombieJob: --- 10, [1369540]
[2026-01-09 21:07:55] 2026-01-10 02:07:23,840 | INFO     | zombie collector waiting for pid 1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:23,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:07:55] 2026-01-10 02:07:23,840 | INFO     | collected zombie processes
[2026-01-09 21:07:55] 2026-01-10 02:07:23,840 | INFO     | will attempt to kill all subprocesses of pid=1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:24,402 | INFO     | process IDs to be killed: [1369540] (in reverse order)
[2026-01-09 21:07:55] 2026-01-10 02:07:24,603 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:07:55] 2026-01-10 02:07:24,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:07:55] 2026-01-10 02:07:24,646 | INFO     | did not find any defunct processes belonging to 1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:24,680 | INFO     | did not find any defunct processes belonging to 1369540
[2026-01-09 21:07:55] 2026-01-10 02:07:24,684 | INFO     | ready for new job
[2026-01-09 21:07:55] 2026-01-10 02:07:24,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:07:55] 2026-01-10 02:07:24,688 | INFO     | ***************************************
[2026-01-09 21:07:55] 2026-01-10 02:07:24,688 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:07:55] 2026-01-10 02:07:24,688 | INFO     | ***************************************
[2026-01-09 21:07:55] 2026-01-10 02:07:24,688 | INFO     | 
[2026-01-09 21:07:55] 2026-01-10 02:07:24,713 | INFO     | architecture information:
[2026-01-09 21:07:55] 2026-01-10 02:07:24,767 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:07:55] 2026-01-10 02:07:24,820 | INFO     | cat /etc/os-release:
[2026-01-09 21:07:55] NAME="CentOS Linux"
[2026-01-09 21:07:55] VERSION="7 (Core)"
[2026-01-09 21:07:55] ID="centos"
[2026-01-09 21:07:55] ID_LIKE="rhel fedora"
[2026-01-09 21:07:55] VERSION_ID="7"
[2026-01-09 21:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:07:55] ANSI_COLOR="0;31"
[2026-01-09 21:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:07:55] HOME_URL="https://www.centos.org/"
[2026-01-09 21:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:07:55] 
[2026-01-09 21:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:07:55] 
[2026-01-09 21:07:55] 2026-01-10 02:07:24,820 | INFO     | ***************************************
[2026-01-09 21:07:55] 2026-01-10 02:07:25,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 21:07:55] 2026-01-10 02:07:25,390 | INFO     | sufficient remaining disk space (74767663104 B)
[2026-01-09 21:07:55] 2026-01-10 02:07:25,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:07:55] 2026-01-10 02:07:25,390 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:07:55] 2026-01-10 02:07:25,390 | INFO     | update_server=False
[2026-01-09 21:07:55] 2026-01-10 02:07:25,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:07:55] 2026-01-10 02:07:25,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:07:55] 2026-01-10 02:07:25,404 | INFO     | all data control threads have been joined
[2026-01-09 21:07:55] 2026-01-10 02:07:25,427 | INFO     | all payload control threads have been joined
[2026-01-09 21:07:55] 2026-01-10 02:07:25,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:07:55] 2026-01-10 02:07:25,624 | INFO     | aborting loop
[2026-01-09 21:07:55] 2026-01-10 02:07:25,629 | INFO     | all job control threads have been joined
[2026-01-09 21:07:55] 2026-01-10 02:07:26,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:07:55] 2026-01-10 02:07:26,404 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,410 | INFO     | [data] control thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,434 | INFO     | [payload] control thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,581 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,594 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,630 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,636 | INFO     | [job] control thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:26,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:27,268 | INFO     | [job] validate thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:27,339 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:27,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:07:55] 2026-01-10 02:07:27,539 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:27,724 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:28,012 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:28,204 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:28,518 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:29,411 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:07:55] 2026-01-10 02:07:34,042 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:07:55] 2026-01-10 02:07:36,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509507069760)>', '<ExcThread(monitor, started 140509133641472)>']
[2026-01-09 21:07:55] 2026-01-10 02:07:41,167 | INFO     | all workflow threads have been joined
[2026-01-09 21:07:55] 2026-01-10 02:07:41,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:07:55] 2026-01-10 02:07:41,168 | INFO     | traces error code: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:41,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:07:55] 2026-01-10 02:07:55,045 | INFO     | PID=1360374 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:07:55] 2026-01-10 02:07:55,046 | INFO     | .. there are 10 such processes running
[2026-01-09 21:07:55] 2026-01-10 02:07:55,047 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:07:55] 2026-01-10 02:07:55,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:07:55] 2026-01-10 02:07:55,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:07:55] 2026-01-10 02:07:55,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:07:55] 2026-01-10 02:07:55,047 | INFO     | [monitor] control thread has ended
[2026-01-09 21:07:55] 2026-01-10 02:07:55,174 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:07:55] 2026-01-10 02:07:55,177 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:07:55] 2026-01-10 02:07:55,179 [wrapper] pilotpid: 1360374
[2026-01-09 21:07:55] 2026-01-10 02:07:55,180 [wrapper] Pilot exit status: 0
[2026-01-09 21:07:55] 2026-01-10 02:07:55,252 [wrapper] pandaids: 6963194359
[2026-01-09 21:07:55] 2026-01-10 02:07:55,316 [wrapper] cleanup supervisor_pilot 1903163 1360375
[2026-01-09 21:07:55] 2026-01-10 02:07:55,318 [wrapper] Test setup, not cleaning
[2026-01-09 21:07:55] 2026-01-10 02:07:55,320 [wrapper] apfmon messages muted
[2026-01-09 21:07:55] 2026-01-10 02:07:55,322 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:07:55] 2026-01-10 02:07:55,325 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:07:55]  *** Error codes and diagnostics ***
[2026-01-09 21:07:55]     "exeErrorCode": 0,
[2026-01-09 21:07:55]     "exeErrorDiag": "",
[2026-01-09 21:07:55]     "pilotErrorCode": 0,
[2026-01-09 21:07:55]     "pilotErrorDiag": "",
[2026-01-09 21:07:55]  *** Listing of results directory ***
[2026-01-09 21:07:55] total 445564
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 21:07:55] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:07:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:41 run_atlas
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:41 job.xml
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas 222864274 Jan  9 16:41 EVNT.47898824._001515.pool.root.1
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:41 start_atlas.sh
[2026-01-09 21:07:55] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:41 shared
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 16:41 input.tar.gz
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:41 boinc_lockfile
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 16:41 pandaJob.out
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas        57 Jan  9 16:41 setup.sh.local
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas    989398 Jan  9 16:42 agis_schedconf.cvmfs.json
[2026-01-09 21:07:55] drwx------. 5 boincer umatlas      4096 Jan  9 16:42 pilot3
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas      6843 Jan  9 21:03 init_data.xml
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas 224156917 Jan  9 21:06 HITS.47898826._039422.pool.root.1
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:06 boinc_task_state.xml
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas      1051 Jan  9 21:06 memory_monitor_summary.json
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas    498759 Jan  9 21:06 log.47898826._039422.job.log.tgz.1
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas      7824 Jan  9 21:07 heartbeat.json
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:07 boinc_mmap_file
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:07 wrapper_checkpoint.txt
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas       823 Jan  9 21:07 pilotlog.txt
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas        95 Jan  9 21:07 pilot_heartbeat.json
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas   2166726 Jan  9 21:07 log.47898826._039422.job.log.1
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas       357 Jan  9 21:07 output.list
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:07 runtime_log
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas   2682880 Jan  9 21:07 result.tar.gz
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 21:07 runtime_log.err
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas       657 Jan  9 21:07 5HHODmlFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHQmKDmBG2gQn.diag
[2026-01-09 21:07:55] -rw-r--r--. 1 boincer umatlas     21523 Jan  9 21:07 stderr.txt
[2026-01-09 21:07:55] HITS file was successfully produced:
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas 224156917 Jan  9 21:06 shared/HITS.pool.root.1
[2026-01-09 21:07:55]  *** Contents of shared directory: ***
[2026-01-09 21:07:55] total 439768
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas 222864274 Jan  9 16:41 ATLAS.root_0
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:41 start_atlas.sh
[2026-01-09 21:07:55] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 16:41 input.tar.gz
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas 224156917 Jan  9 21:06 HITS.pool.root.1
[2026-01-09 21:07:55] -rw-------. 1 boincer umatlas   2682880 Jan  9 21:07 result.tar.gz
21:07:57 (1355910): run_atlas exited; CPU time 55034.383707
21:07:57 (1355910): called boinc_finish(0)

</stderr_txt>
]]>

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