Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:14:21 (1067773): wrapper (7.7.26015): starting
19:14:21 (1067773): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:14:21] Arguments: --nthreads 8
[2026-01-09 19:14:21] Threads: 8
[2026-01-09 19:14:21] Checking for CVMFS
[2026-01-09 19:14:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:14:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:14:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:14:22] 2.13.3.0 11460 94117 152956 154961 0 408 17909988 32935937 22406 16776704 0 758129468 99.641 694581810 35560 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:14:22] CVMFS is ok
[2026-01-09 19:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:14:22] Further information can be found at the LHC@home message board.
[2026-01-09 19:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:14:22] Checking for apptainer binary...
[2026-01-09 19:14:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:14:22] Running /usr/bin/apptainer --version
[2026-01-09 19:14:22] apptainer version 1.4.5-2.el9
[2026-01-09 19:14:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:14:22] c7-3-34.aglt2.org
[2026-01-09 19:14:22] apptainer works
[2026-01-09 19:14:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:14:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:14:23] Starting ATLAS job with PandaID=6963388717
[2026-01-09 19:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:52:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:52:06] 2026-01-10 03:51:31,415 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963388717/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,416 | INFO     | extracted standard info from prmon json
[2026-01-09 22:52:06] 2026-01-10 03:51:31,416 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:52:06] 2026-01-10 03:51:31,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:52:06] 2026-01-10 03:51:31,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:52:06] 2026-01-10 03:51:31,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:52:06] 2026-01-10 03:51:31,431 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:52:06] 2026-01-10 03:51:31,440 | INFO     | sum of square deviations: 2996454322.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,441 | INFO     | sum of deviations: 5547523121.999996
[2026-01-09 22:52:06] 2026-01-10 03:51:31,441 | INFO     | mean x: 1768010576.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,441 | INFO     | mean y: 2546440.0375586855
[2026-01-09 22:52:06] 2026-01-10 03:51:31,441 | INFO     | intersect: -3270682014.76968
[2026-01-09 22:52:06] 2026-01-10 03:51:31,442 | INFO     | chi2: 3.1595242514697115
[2026-01-09 22:52:06] 2026-01-10 03:51:31,442 | INFO     | sum of square deviations: 2790348132.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,443 | INFO     | sum of deviations: 6263081334.49999
[2026-01-09 22:52:06] 2026-01-10 03:51:31,443 | INFO     | mean x: 1768010423.5
[2026-01-09 22:52:06] 2026-01-10 03:51:31,443 | INFO     | mean y: 2546969.581730769
[2026-01-09 22:52:06] 2026-01-10 03:51:31,444 | INFO     | intersect: -3965844270.0760574
[2026-01-09 22:52:06] 2026-01-10 03:51:31,444 | INFO     | chi2: 3.161989226358504
[2026-01-09 22:52:06] 2026-01-10 03:51:31,444 | INFO     | current chi2=3.161989226358504 (change=-0.07801728021698123 %)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,444 | INFO     | right removable region: 207
[2026-01-09 22:52:06] 2026-01-10 03:51:31,444 | INFO     | sum of square deviations: 2790348132.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | sum of deviations: -47630997250.500015
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | mean x: 1768010728.5
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | mean y: 2585623.889423077
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | intersect: 30182373293.4941
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | chi2: 0.6232520782798092
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | current chi2=0.6232520782798092 (change=80.27386313018829 %)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,446 | INFO     | sum of square deviations: 2593916542.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | sum of deviations: -59443548888.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | mean x: 1768010881.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | mean y: 2594763.5763546797
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | intersect: 40519257322.89144
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | chi2: 0.4344231787233664
[2026-01-09 22:52:06] 2026-01-10 03:51:31,448 | INFO     | current chi2=0.4344231787233664 (change=30.29735577899959 %)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,449 | INFO     | sum of square deviations: 2406926989.5
[2026-01-09 22:52:06] 2026-01-10 03:51:31,450 | INFO     | sum of deviations: -61862861958.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,450 | INFO     | mean x: 1768011033.5
[2026-01-09 22:52:06] 2026-01-10 03:51:31,450 | INFO     | mean y: 2596723.121212121
[2026-01-09 22:52:06] 2026-01-10 03:51:31,450 | INFO     | intersect: 45444034283.44877
[2026-01-09 22:52:06] 2026-01-10 03:51:31,450 | INFO     | chi2: 0.3960011531388301
[2026-01-09 22:52:06] 2026-01-10 03:51:31,451 | INFO     | current chi2=0.3960011531388301 (change=8.844377433415634 %)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,451 | INFO     | left removable region: 30
[2026-01-09 22:52:06] 2026-01-10 03:51:31,451 | INFO     | sum of square deviations: 1719429448.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,452 | INFO     | sum of deviations: -47651526098.99999
[2026-01-09 22:52:06] 2026-01-10 03:51:31,452 | INFO     | mean x: 1768011308.0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,452 | INFO     | mean y: 2587284.327683616
[2026-01-09 22:52:06] 2026-01-10 03:51:31,452 | INFO     | intersect: 49000490097.08044
[2026-01-09 22:52:06] 2026-01-10 03:51:31,452 | INFO     | chi2: 0.33995284856430275
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | current memory leak: -27.71 B/s (using 177 data points, chi2=0.34)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | could have reported an average CPU frequency of 3172 MHz (11 samples)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | ..............................
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | . Timing measurements:
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | . get job = 0 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,453 | INFO     | . initial setup = 2 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | . payload setup = 10 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | . stage-in = 0 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | . payload execution = 12970 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | . stage-out = 2 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | . log creation = 0 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,454 | INFO     | ..............................
[2026-01-09 22:52:06] 2026-01-10 03:51:31,885 | INFO     | time since job start (13014s) is within the limit (349056.0s)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,890 | INFO     | 
[2026-01-09 22:52:06] 2026-01-10 03:51:31,891 | INFO     | job summary report
[2026-01-09 22:52:06] 2026-01-10 03:51:31,891 | INFO     | --------------------------------------------------
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | PanDA job id: 6963388717
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | task id: 47898826
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | errors: (none)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | pilot state: finished 
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | transexitcode: 0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | exeerrorcode: 0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | exeerrordiag: 
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | exitcode: 0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | exitmsg: OK
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | cpuconsumptiontime: 44297 s
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | nevents: 400
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | neventsw: 0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | pid: 1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | pgrp: 1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | corecount: 8
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | event service: False
[2026-01-09 22:52:06] 2026-01-10 03:51:31,892 | INFO     | sizes: {0: 2283919, 1: 2283947, 6: 2284209, 11: 2284237, 12985: 2314544, 12988: 2323542, 12990: 2323726, 12997: 2323920}
[2026-01-09 22:52:06] 2026-01-10 03:51:31,893 | INFO     | --------------------------------------------------
[2026-01-09 22:52:06] 2026-01-10 03:51:31,893 | INFO     | 
[2026-01-09 22:52:06] 2026-01-10 03:51:31,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:52:06] 2026-01-10 03:51:31,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,955 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:52:06] 2026-01-10 03:51:31,956 | INFO     | job 6963388717 has completed (purged errors)
[2026-01-09 22:52:06] 2026-01-10 03:51:31,956 | INFO     | overall cleanup function is called
[2026-01-09 22:52:06] 2026-01-10 03:51:32,964 | INFO     | --- collectZombieJob: --- 10, [1078567]
[2026-01-09 22:52:06] 2026-01-10 03:51:32,964 | INFO     | zombie collector waiting for pid 1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:32,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:52:06] 2026-01-10 03:51:32,965 | INFO     | collected zombie processes
[2026-01-09 22:52:06] 2026-01-10 03:51:32,965 | INFO     | will attempt to kill all subprocesses of pid=1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:33,443 | INFO     | process IDs to be killed: [1078567] (in reverse order)
[2026-01-09 22:52:06] 2026-01-10 03:51:33,557 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:52:06] 2026-01-10 03:51:33,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:52:06] 2026-01-10 03:51:33,573 | INFO     | did not find any defunct processes belonging to 1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:33,587 | INFO     | did not find any defunct processes belonging to 1078567
[2026-01-09 22:52:06] 2026-01-10 03:51:33,587 | INFO     | ready for new job
[2026-01-09 22:52:06] 2026-01-10 03:51:33,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:52:06] 2026-01-10 03:51:33,589 | INFO     | ***************************************
[2026-01-09 22:52:06] 2026-01-10 03:51:33,590 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:52:06] 2026-01-10 03:51:33,590 | INFO     | ***************************************
[2026-01-09 22:52:06] 2026-01-10 03:51:33,590 | INFO     | 
[2026-01-09 22:52:06] 2026-01-10 03:51:33,594 | INFO     | architecture information:
[2026-01-09 22:52:06] 2026-01-10 03:51:33,595 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:52:06] 2026-01-10 03:51:33,610 | INFO     | cat /etc/os-release:
[2026-01-09 22:52:06] NAME="CentOS Linux"
[2026-01-09 22:52:06] VERSION="7 (Core)"
[2026-01-09 22:52:06] ID="centos"
[2026-01-09 22:52:06] ID_LIKE="rhel fedora"
[2026-01-09 22:52:06] VERSION_ID="7"
[2026-01-09 22:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:52:06] ANSI_COLOR="0;31"
[2026-01-09 22:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:52:06] HOME_URL="https://www.centos.org/"
[2026-01-09 22:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:52:06] 
[2026-01-09 22:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:52:06] 
[2026-01-09 22:52:06] 2026-01-10 03:51:33,611 | INFO     | ***************************************
[2026-01-09 22:52:06] 2026-01-10 03:51:34,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:52:06] 2026-01-10 03:51:34,133 | INFO     | sufficient remaining disk space (74953261056 B)
[2026-01-09 22:52:06] 2026-01-10 03:51:34,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:52:06] 2026-01-10 03:51:34,133 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:52:06] 2026-01-10 03:51:34,133 | INFO     | update_server=False
[2026-01-09 22:52:06] 2026-01-10 03:51:34,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:52:06] 2026-01-10 03:51:34,197 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:52:06] 2026-01-10 03:51:34,197 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:52:06] 2026-01-10 03:51:34,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:52:06] 2026-01-10 03:51:34,198 | INFO     | will abort loop
[2026-01-09 22:52:06] 2026-01-10 03:51:34,761 | INFO     | all data control threads have been joined
[2026-01-09 22:52:06] 2026-01-10 03:51:34,820 | INFO     | all job control threads have been joined
[2026-01-09 22:52:06] 2026-01-10 03:51:34,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:52:06] 2026-01-10 03:51:34,887 | INFO     | all payload control threads have been joined
[2026-01-09 22:52:06] 2026-01-10 03:51:35,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:52:06] 2026-01-10 03:51:35,139 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,203 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,767 | INFO     | [data] control thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,826 | INFO     | [job] control thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,893 | INFO     | [payload] control thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,922 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:35,937 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,150 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,152 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,220 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,325 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,446 | INFO     | [job] validate thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:36,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:52:06] 2026-01-10 03:51:36,891 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:37,573 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:39,116 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:44,547 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:52:06] 2026-01-10 03:51:45,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:52:06] 2026-01-10 03:51:58,998 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:52:06] 2026-01-10 03:52:00,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212116346688)>', '<ExcThread(monitor, started 140211329681152)>']
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | INFO     | PID=1071811 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | INFO     | .. there are 15 such processes running
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:52:06] 2026-01-10 03:52:05,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:52:06] 2026-01-10 03:52:05,416 | INFO     | [monitor] control thread has ended
[2026-01-09 22:52:06] 2026-01-10 03:52:05,672 | INFO     | all workflow threads have been joined
[2026-01-09 22:52:06] 2026-01-10 03:52:05,673 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:52:06] 2026-01-10 03:52:05,673 | INFO     | traces error code: 0
[2026-01-09 22:52:06] 2026-01-10 03:52:05,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:52:06] 2026-01-10 03:52:05,794 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:52:06] 2026-01-10 03:52:05,796 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:52:06] 2026-01-10 03:52:05,798 [wrapper] pilotpid: 1071811
[2026-01-09 22:52:06] 2026-01-10 03:52:05,801 [wrapper] Pilot exit status: 0
[2026-01-09 22:52:06] 2026-01-10 03:52:05,813 [wrapper] pandaids: 6963388717
[2026-01-09 22:52:06] 2026-01-10 03:52:05,903 [wrapper] cleanup supervisor_pilot 1510458 1071812
[2026-01-09 22:52:06] 2026-01-10 03:52:05,906 [wrapper] Test setup, not cleaning
[2026-01-09 22:52:06] 2026-01-10 03:52:05,908 [wrapper] apfmon messages muted
[2026-01-09 22:52:06] 2026-01-10 03:52:05,910 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:52:06] 2026-01-10 03:52:05,913 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:52:06]  *** Error codes and diagnostics ***
[2026-01-09 22:52:06]     "exeErrorCode": 0,
[2026-01-09 22:52:06]     "exeErrorDiag": "",
[2026-01-09 22:52:06]     "pilotErrorCode": 0,
[2026-01-09 22:52:06]     "pilotErrorDiag": "",
[2026-01-09 22:52:06]  *** Listing of results directory ***
[2026-01-09 22:52:06] total 443068
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 22:52:06] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:32 queuedata.json
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:52:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:14 run_atlas
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:14 job.xml
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas 223106638 Jan  9 19:14 EVNT.47898824._000651.pool.root.1
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:14 start_atlas.sh
[2026-01-09 22:52:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:14 shared
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas    592407 Jan  9 19:14 input.tar.gz
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:14 boinc_lockfile
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 19:14 pandaJob.out
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas        57 Jan  9 19:14 setup.sh.local
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas    989374 Jan  9 19:14 agis_schedconf.cvmfs.json
[2026-01-09 22:52:06] drwx------. 5 boincer umatlas      4096 Jan  9 19:14 pilot3
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 22:48 init_data.xml
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas 222211633 Jan  9 22:50 HITS.47898826._039544.pool.root.1
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:50 boinc_task_state.xml
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas      1026 Jan  9 22:51 memory_monitor_summary.json
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:51 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas    450934 Jan  9 22:51 log.47898826._039544.job.log.tgz.1
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas        95 Jan  9 22:51 pilot_heartbeat.json
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas      7775 Jan  9 22:51 heartbeat.json
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:52 boinc_mmap_file
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:52 wrapper_checkpoint.txt
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas      5082 Jan  9 22:52 pilotlog.txt
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas   1779634 Jan  9 22:52 log.47898826._039544.job.log.1
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas       357 Jan  9 22:52 output.list
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:52 runtime_log
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas   2252800 Jan  9 22:52 result.tar.gz
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 22:52 runtime_log.err
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas       655 Jan  9 22:52 7m7MDmxFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPEhKDmGgdeXo.diag
[2026-01-09 22:52:06] -rw-r--r--. 1 boincer umatlas     21077 Jan  9 22:52 stderr.txt
[2026-01-09 22:52:06] HITS file was successfully produced:
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas 222211633 Jan  9 22:50 shared/HITS.pool.root.1
[2026-01-09 22:52:06]  *** Contents of shared directory: ***
[2026-01-09 22:52:06] total 437688
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas 223106638 Jan  9 19:14 ATLAS.root_0
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:14 start_atlas.sh
[2026-01-09 22:52:06] -rw-r--r--. 2 boincer umatlas    592407 Jan  9 19:14 input.tar.gz
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas 222211633 Jan  9 22:50 HITS.pool.root.1
[2026-01-09 22:52:06] -rw-------. 1 boincer umatlas   2252800 Jan  9 22:52 result.tar.gz
22:52:07 (1067773): run_atlas exited; CPU time 44665.144015
22:52:07 (1067773): called boinc_finish(0)

</stderr_txt>
]]>

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