Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:41:07 (28472): wrapper (7.7.26015): starting
23:41:07 (28472): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:41:07] Arguments: --nthreads 8
[2026-01-09 23:41:07] Threads: 8
[2026-01-09 23:41:07] Checking for CVMFS
[2026-01-09 23:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:41:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:41:07] 2.11.0.0 4243 129508 91312 154959 0 187 3164347 4096000 873 130560 2 7382579 99.281 10094472 596 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-09 23:41:07] CVMFS is ok
[2026-01-09 23:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 23:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 23:41:07] Further information can be found at the LHC@home message board.
[2026-01-09 23:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:41:07] Checking for apptainer binary...
[2026-01-09 23:41:07] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-09 23:41:07] apptainer is not installed, using version from CVMFS
[2026-01-09 23:41:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:41:07] WARNING: Environment variable TMPDIR already has value [/tmp/job_11009420/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node386
[2026-01-09 23:41:07] apptainer works
[2026-01-09 23:41:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:41:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:41:07] Starting ATLAS job with PandaID=6963162038
[2026-01-09 23:41:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11009420/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:44:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:44:24]  scope=mc23_13p6TeV
[2026-01-10 00:44:24]  status=None
[2026-01-10 00:44:24]  status_code=0
[2026-01-10 00:44:24]  storage_token=
[2026-01-10 00:44:24]  surl=/tmp/job_11009420/atlas/pilot/slots/0/PanDA_Pilot-6963162038/log.47898826._033665.job.log.tgz.1
[2026-01-10 00:44:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/dc/log.47898826._033665.job.log.tgz.1
[2026-01-10 00:44:24]  workdir=None
[2026-01-10 00:44:24] ]
[2026-01-10 00:44:24] 2026-01-09 23:43:20,274 | INFO     | transferring file log.47898826._033665.job.log.tgz.1 from /tmp/job_11009420/atlas/pilot/slots/0/PanDA_Pilot-6963162038/log.47898826._033665.job.log.tgz.1 to /tmp/j
[2026-01-10 00:44:24] 2026-01-09 23:43:20,274 | INFO     | executing command: /usr/bin/env mv /tmp/job_11009420/atlas/pilot/slots/0/PanDA_Pilot-6963162038/log.47898826._033665.job.log.tgz.1 /tmp/job_11009420/atlas/pilot/sl
[2026-01-10 00:44:24] 2026-01-09 23:43:20,282 | INFO     | adding to output.list: log.47898826._033665.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/dc/log.47898826._033665.job.log.tg
[2026-01-10 00:44:24] 2026-01-09 23:43:20,282 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 00:44:24] 2026-01-09 23:43:20,282 | INFO     | summary of transferred files:
[2026-01-10 00:44:24] 2026-01-09 23:43:20,282 | INFO     |  -- lfn=log.47898826._033665.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 00:44:24] 2026-01-09 23:43:20,283 | INFO     | stage-out finished correctly
[2026-01-10 00:44:24] 2026-01-09 23:43:20,600 | INFO     | time since job start (3728s) is within the limit (349056.0s)
[2026-01-10 00:44:24] 2026-01-09 23:43:21,728 | INFO     | PID=32208 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:44:24] 2026-01-09 23:43:21,728 | INFO     | .. there are 3 such processes running
[2026-01-10 00:44:24] 2026-01-09 23:43:22,520 | WARNING  | process 6719 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 00:44:24] 2026-01-09 23:43:22,520 | INFO     | using path: /tmp/job_11009420/atlas/pilot/slots/0/PanDA_Pilot-6963162038/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:44:24] 2026-01-09 23:43:22,610 | INFO     | number of running child processes to parent process 6719: 1
[2026-01-10 00:44:24] 2026-01-09 23:43:22,610 | INFO     | maximum number of monitored processes: 6
[2026-01-10 00:44:24] 2026-01-09 23:43:22,728 | INFO     | time since job start (3730s) is within the limit (349056.0s)
[2026-01-10 00:44:24] 2026-01-09 23:43:23,009 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 00:44:24] 2026-01-09 23:43:24,171 | INFO     | job 6963162038 has state=finished
[2026-01-10 00:44:24] 2026-01-09 23:43:24,171 | INFO     | preparing for final server update for job 6963162038 in state='finished'
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | this job has now completed (state=finished)
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | log transfer has been attempted: DONE
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | job 6963162038 has finished - writing final server update
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | total number of processed events: 400 (read)
[2026-01-10 00:44:24] 2026-01-09 23:43:24,172 | INFO     | executing command: lscpu
[2026-01-10 00:44:24] 2026-01-09 23:43:24,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 00:44:24] 2026-01-09 23:43:24,734 | INFO     | time since job start (3732s) is within the limit (349056.0s)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,113 | INFO     | monitor loop #279: job 0:6963162038 is in state 'finished'
[2026-01-10 00:44:24] 2026-01-09 23:43:25,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,644 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:44:24] 2026-01-09 23:43:25,648 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2552.89075
[2026-01-10 00:44:24] 2026-01-09 23:43:25,653 | INFO     | using path: /tmp/job_11009420/atlas/pilot/slots/0/PanDA_Pilot-6963162038/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,653 | INFO     | extracted standard info from prmon json
[2026-01-10 00:44:24] 2026-01-09 23:43:25,653 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:44:24] 2026-01-09 23:43:25,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:44:24] 2026-01-09 23:43:25,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:44:24] 2026-01-09 23:43:25,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:44:24] 2026-01-09 23:43:25,654 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | sum of square deviations: 48810217.5
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | sum of deviations: -2535318478.0000005
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | mean x: 1768000412.5
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | mean y: 2577476.3333333335
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | intersect: 91836712714.98235
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | chi2: 0.01269464383751853
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | current memory leak: -51.94 B/s (using 54 data points, chi2=0.01)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | could have reported an average CPU frequency of 2531 MHz (6 samples)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | ..............................
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . Timing measurements:
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . get job = 0 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . initial setup = 1 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . payload setup = 2 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . stage-in = 0 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . payload execution = 3708 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . stage-out = 0 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | . log creation = 0 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,655 | INFO     | ..............................
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | 
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | job summary report
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | --------------------------------------------------
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | PanDA job id: 6963162038
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | task id: 47898826
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | errors: (none)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | pilot state: finished 
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | transexitcode: 0
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | exeerrorcode: 0
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | exeerrordiag: 
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | exitcode: 0
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | exitmsg: OK
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | cpuconsumptiontime: 27461 s
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | nevents: 400
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | neventsw: 0
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | pid: 6719
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | pgrp: 6719
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | corecount: 8
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | event service: False
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | sizes: {0: 2283814, 1: 2284124, 2: 2284386, 11: 2284414, 3714: 2310361, 3715: 2319389, 3718: 2319573, 3720: 2319767}
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | --------------------------------------------------
[2026-01-10 00:44:24] 2026-01-09 23:43:25,704 | INFO     | 
[2026-01-10 00:44:24] 2026-01-09 23:43:25,705 | INFO     | executing command: ls -lF /tmp/job_11009420/atlas/pilot/slots/0
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | job 6963162038 has completed (purged errors)
[2026-01-10 00:44:24] 2026-01-09 23:43:25,715 | INFO     | overall cleanup function is called
[2026-01-10 00:44:24] 2026-01-09 23:43:26,721 | INFO     | --- collectZombieJob: --- 10, [6719]
[2026-01-10 00:44:24] 2026-01-09 23:43:26,721 | INFO     | zombie collector waiting for pid 6719
[2026-01-10 00:44:24] 2026-01-09 23:43:26,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:44:24] 2026-01-09 23:43:26,721 | INFO     | collected zombie processes
[2026-01-10 00:44:24] 2026-01-09 23:43:26,721 | INFO     | will attempt to kill all subprocesses of pid=6719
[2026-01-10 00:44:24] 2026-01-09 23:43:26,816 | INFO     | process IDs to be killed: [6719] (in reverse order)
[2026-01-10 00:44:24] 2026-01-09 23:43:26,848 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:44:24] 2026-01-09 23:43:26,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:44:24] 2026-01-09 23:43:26,852 | INFO     | did not find any defunct processes belonging to 6719
[2026-01-10 00:44:24] 2026-01-09 23:43:26,854 | INFO     | did not find any defunct processes belonging to 6719
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | ready for new job
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | ***************************************
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | ***************************************
[2026-01-10 00:44:24] 2026-01-09 23:43:26,855 | INFO     | 
[2026-01-10 00:44:24] 2026-01-09 23:43:26,869 | INFO     | architecture information:
[2026-01-10 00:44:24] 2026-01-09 23:43:26,869 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:44:24] 2026-01-09 23:43:26,875 | INFO     | cat /etc/os-release:
[2026-01-10 00:44:24] NAME="CentOS Linux"
[2026-01-10 00:44:24] VERSION="7 (Core)"
[2026-01-10 00:44:24] ID="centos"
[2026-01-10 00:44:24] ID_LIKE="rhel fedora"
[2026-01-10 00:44:24] VERSION_ID="7"
[2026-01-10 00:44:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:44:24] ANSI_COLOR="0;31"
[2026-01-10 00:44:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:44:24] HOME_URL="https://www.centos.org/"
[2026-01-10 00:44:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:44:24] 
[2026-01-10 00:44:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:44:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:44:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:44:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:44:24] 
[2026-01-10 00:44:24] 2026-01-09 23:43:26,875 | INFO     | ***************************************
[2026-01-10 00:44:24] 2026-01-09 23:43:27,377 | INFO     | executing command: df -mP /tmp/job_11009420/atlas/pilot/slots/0
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | INFO     | sufficient remaining disk space (226404335616 B)
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | INFO     | update_server=False
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:44:24] 2026-01-09 23:43:27,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:44:24] 2026-01-09 23:43:27,616 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 00:44:24] 2026-01-09 23:43:27,616 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 00:44:24] 2026-01-09 23:43:27,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:44:24] 2026-01-09 23:43:27,616 | INFO     | will abort loop
[2026-01-10 00:44:24] 2026-01-09 23:43:27,848 | INFO     | all data control threads have been joined
[2026-01-10 00:44:24] 2026-01-09 23:43:28,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:44:24] 2026-01-09 23:43:28,388 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,388 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,578 | INFO     | all job control threads have been joined
[2026-01-10 00:44:24] 2026-01-09 23:43:28,597 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,621 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,754 | INFO     | all payload control threads have been joined
[2026-01-10 00:44:24] 2026-01-09 23:43:28,757 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,853 | INFO     | [data] control thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:28,989 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:44:24] 2026-01-09 23:43:29,265 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,533 | INFO     | [job] validate thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,583 | INFO     | [job] control thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,734 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,760 | INFO     | [payload] control thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,840 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:29,916 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:30,346 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:33,065 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:44:24] 2026-01-09 23:43:57,916 | INFO     | PID=32208 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:44:24] 2026-01-09 23:43:57,916 | INFO     | .. there are 3 such processes running
[2026-01-10 00:44:24] 2026-01-09 23:43:57,917 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:44:24] 2026-01-09 23:43:57,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:44:24] 2026-01-09 23:43:57,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:44:24] 2026-01-09 23:44:18,049 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:44:24] 2026-01-09 23:44:19,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062920448)>']
[2026-01-10 00:44:24] 2026-01-09 23:44:20,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:44:24] 2026-01-09 23:44:20,026 | INFO     | [monitor] control thread has ended
[2026-01-10 00:44:24] 2026-01-09 23:44:24,086 | INFO     | all workflow threads have been joined
[2026-01-10 00:44:24] 2026-01-09 23:44:24,086 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:44:24] 2026-01-09 23:44:24,086 | INFO     | traces error code: 0
[2026-01-10 00:44:24] 2026-01-09 23:44:24,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:44:24] 2026-01-09 23:44:24,144 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:44:24] 2026-01-09 23:44:24,145 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:44:24] 2026-01-09 23:44:24,146 [wrapper] pilotpid: 32208
[2026-01-10 00:44:24] 2026-01-09 23:44:24,147 [wrapper] Pilot exit status: 0
[2026-01-10 00:44:24] 2026-01-09 23:44:24,152 [wrapper] pandaids: 6963162038
[2026-01-10 00:44:24] 2026-01-09 23:44:24,176 [wrapper] cleanup supervisor_pilot 16152 32209
[2026-01-10 00:44:24] 2026-01-09 23:44:24,177 [wrapper] Test setup, not cleaning
[2026-01-10 00:44:24] 2026-01-09 23:44:24,178 [wrapper] apfmon messages muted
[2026-01-10 00:44:24] 2026-01-09 23:44:24,179 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:44:24] 2026-01-09 23:44:24,180 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:44:24]  *** Error codes and diagnostics ***
[2026-01-10 00:44:24]     "exeErrorCode": 0,
[2026-01-10 00:44:24]     "exeErrorDiag": "",
[2026-01-10 00:44:24]     "pilotErrorCode": 0,
[2026-01-10 00:44:24]     "pilotErrorDiag": "",
[2026-01-10 00:44:24]  *** Listing of results directory ***
[2026-01-10 00:44:24] total 444304
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 00:44:24] -rwx------ 1 mf493845 unix-user     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      5112 Jan  8 22:47 queuedata.json
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user       100 Jan  9 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:44:24] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan  9 22:43 run_atlas
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user       105 Jan  9 22:43 job.xml
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user 225451417 Jan  9 23:41 EVNT.47898824._001235.pool.root.1
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user     15847 Jan  9 23:41 start_atlas.sh
[2026-01-10 00:44:24] drwxrwx--x 2 mf493845 unix-user       100 Jan  9 23:41 shared
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user    592395 Jan  9 23:41 input.tar.gz
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      6391 Jan  9 23:41 init_data.xml
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user         0 Jan  9 23:41 boinc_setup_complete
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      8192 Jan  9 23:41 boinc_mmap_file
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user         0 Jan  9 23:41 boinc_lockfile
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      2519 Jan  9 23:41 pandaJob.out
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    989375 Jan  9 23:41 agis_schedconf.cvmfs.json
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user   1516240 Jan  9 23:41 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:44:24] drwx------ 5 mf493845 unix-user       440 Jan  9 23:41 pilot3
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user 223843380 Jan 10 00:42 HITS.47898826._033665.pool.root.1
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user        95 Jan 10 00:43 pilot_heartbeat.json
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      1012 Jan 10 00:43 memory_monitor_summary.json
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    316595 Jan 10 00:43 log.47898826._033665.job.log.tgz.1
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      7762 Jan 10 00:43 heartbeat.json
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      5021 Jan 10 00:44 pilotlog.txt
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    577483 Jan 10 00:44 log.47898826._033665.job.log.1
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user       357 Jan 10 00:44 output.list
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user       620 Jan 10 00:44 runtime_log
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    911360 Jan 10 00:44 result.tar.gz
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user      9220 Jan 10 00:44 runtime_log.err
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user       642 Jan 10 00:44 gCVNDmS1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjWlKDmjW6VIo.diag
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user     22547 Jan 10 00:44 stderr.txt
[2026-01-10 00:44:24] HITS file was successfully produced:
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user 223843380 Jan 10 00:42 shared/HITS.pool.root.1
[2026-01-10 00:44:24]  *** Contents of shared directory: ***
[2026-01-10 00:44:24] total 440256
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user 225451417 Jan  9 23:41 ATLAS.root_0
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user     15847 Jan  9 23:41 start_atlas.sh
[2026-01-10 00:44:24] -rw-r--r-- 2 mf493845 unix-user    592395 Jan  9 23:41 input.tar.gz
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user 223843380 Jan 10 00:42 HITS.pool.root.1
[2026-01-10 00:44:24] -rw------- 1 mf493845 unix-user    911360 Jan 10 00:44 result.tar.gz
00:44:25 (28472): run_atlas exited; CPU time 27508.630888
00:44:25 (28472): called boinc_finish(0)

</stderr_txt>
]]>

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