Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:03 (3568802): wrapper (7.7.26015): starting
18:28:03 (3568802): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:28:03] Arguments: --nthreads 8
[2026-01-09 18:28:03] Threads: 8
[2026-01-09 18:28:03] Checking for CVMFS
[2026-01-09 18:28:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:28:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:28:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:28:07] 2.13.3.0 13037 30737 287572 154961 0 94 26493959 32935937 18101 16776704 0 29157373 99.604 28959172 13769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:28:07] CVMFS is ok
[2026-01-09 18:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:28:07] Further information can be found at the LHC@home message board.
[2026-01-09 18:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:28:07] Checking for apptainer binary...
[2026-01-09 18:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:28:07] Running /usr/bin/apptainer --version
[2026-01-09 18:28:08] apptainer version 1.4.5-2.el9
[2026-01-09 18:28:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:28:09] c6-12-25-3.aglt2.org
[2026-01-09 18:28:09] apptainer works
[2026-01-09 18:28:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:28:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:28:09] Starting ATLAS job with PandaID=6963194323
[2026-01-09 18:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:59:05]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:59:05] 2026-01-11 00:58:12,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:05] 2026-01-11 00:58:12,497 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:59:05] 2026-01-11 00:58:12,517 | INFO     | sum of square deviations: 1044440897082.5226
[2026-01-10 19:59:05] 2026-01-11 00:58:13,828 | INFO     | sum of deviations: 1514934109927.1846
[2026-01-10 19:59:05] 2026-01-11 00:58:13,873 | INFO     | mean x: 1768047322.4876585
[2026-01-10 19:59:05] 2026-01-11 00:58:13,874 | INFO     | mean y: 2493383.739826551
[2026-01-10 19:59:05] 2026-01-11 00:58:13,874 | INFO     | intersect: -2562012855.22867
[2026-01-10 19:59:05] 2026-01-11 00:58:13,899 | INFO     | chi2: 9.826674039761746
[2026-01-10 19:59:05] 2026-01-11 00:58:13,992 | INFO     | sum of square deviations: 1034025037728.9191
[2026-01-10 19:59:05] 2026-01-11 00:58:14,870 | INFO     | monitor loop #3824: job 0:6963194323 is in state 'finished'
[2026-01-10 19:59:05] 2026-01-11 00:58:14,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:05] 2026-01-11 00:58:14,902 | INFO     | PID=3575936 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:59:05] 2026-01-11 00:58:14,902 | INFO     | .. there are 15 such processes running
[2026-01-10 19:59:05] 2026-01-11 00:58:15,156 | INFO     | sum of deviations: 1987626265056.3103
[2026-01-10 19:59:05] 2026-01-11 00:58:15,178 | INFO     | mean x: 1768047169.9926372
[2026-01-10 19:59:05] 2026-01-11 00:58:15,178 | INFO     | mean y: 2500304.301204819
[2026-01-10 19:59:05] 2026-01-11 00:58:15,179 | INFO     | intersect: -3396079869.979967
[2026-01-10 19:59:05] 2026-01-11 00:58:15,205 | INFO     | chi2: 6.363103284846685
[2026-01-10 19:59:05] 2026-01-11 00:58:15,206 | INFO     | current chi2=6.363103284846685 (change=35.24662302728664 %)
[2026-01-10 19:59:05] 2026-01-11 00:58:15,244 | INFO     | sum of square deviations: 1023678394896.2217
[2026-01-10 19:59:05] 2026-01-11 00:58:15,912 | INFO     | time since job start (91693s) is within the limit (349056.0s)
[2026-01-10 19:59:05] 2026-01-11 00:58:16,027 | INFO     | sum of deviations: 1978236782168.9456
[2026-01-10 19:59:05] 2026-01-11 00:58:16,027 | INFO     | mean x: 1768047017.4956346
[2026-01-10 19:59:05] 2026-01-11 00:58:16,027 | INFO     | mean y: 2500165.9147078576
[2026-01-10 19:59:05] 2026-01-11 00:58:16,049 | INFO     | intersect: -3414213188.64285
[2026-01-10 19:59:05] 2026-01-11 00:58:16,075 | INFO     | chi2: 6.362753543384521
[2026-01-10 19:59:05] 2026-01-11 00:58:16,076 | INFO     | current chi2=6.362753543384521 (change=0.005496397693189834 %)
[2026-01-10 19:59:05] 2026-01-11 00:58:16,076 | INFO     | right removable region: 1488
[2026-01-10 19:59:05] 2026-01-11 00:58:16,125 | INFO     | sum of square deviations: 1034023677428.9187
[2026-01-10 19:59:05] 2026-01-11 00:58:16,769 | INFO     | sum of deviations: 1060665134803.7872
[2026-01-10 19:59:05] 2026-01-11 00:58:16,769 | INFO     | mean x: 1768047474.9926372
[2026-01-10 19:59:05] 2026-01-11 00:58:16,770 | INFO     | mean y: 2500032.0716198124
[2026-01-10 19:59:05] 2026-01-11 00:58:16,770 | INFO     | intersect: -1811100907.9624388
[2026-01-10 19:59:05] 2026-01-11 00:58:16,786 | INFO     | chi2: 6.543397225260978
[2026-01-10 19:59:05] 2026-01-11 00:58:16,787 | INFO     | current chi2=6.543397225260978 (change=33.41188281218672 %)
[2026-01-10 19:59:05] 2026-01-11 00:58:16,798 | INFO     | sum of square deviations: 1023676129478.2288
[2026-01-10 19:59:05] 2026-01-11 00:58:17,234 | INFO     | sum of deviations: 745251873058.2156
[2026-01-10 19:59:05] 2026-01-11 00:58:17,235 | INFO     | mean x: 1768047627.4963062
[2026-01-10 19:59:05] 2026-01-11 00:58:17,235 | INFO     | mean y: 2504679.9482874414
[2026-01-10 19:59:05] 2026-01-11 00:58:17,254 | INFO     | intersect: -1284661024.2274683
[2026-01-10 19:59:05] 2026-01-11 00:58:17,277 | INFO     | chi2: 5.03153184795641
[2026-01-10 19:59:05] 2026-01-11 00:58:17,278 | INFO     | current chi2=5.03153184795641 (change=23.105205526388747 %)
[2026-01-10 19:59:05] 2026-01-11 00:58:17,278 | INFO     | left removable region: 20
[2026-01-10 19:59:05] 2026-01-11 00:58:17,301 | INFO     | sum of square deviations: 980973586842.9822
[2026-01-10 19:59:05] 2026-01-11 00:58:17,445 | INFO     | monitor loop #3825: job 0:6963194323 is in state 'finished'
[2026-01-10 19:59:05] 2026-01-11 00:58:17,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:59:05] 2026-01-11 00:58:17,948 | INFO     | time since job start (91695s) is within the limit (349056.0s)
[2026-01-10 19:59:05] 2026-01-11 00:58:18,002 | INFO     | sum of deviations: 875500335173.4121
[2026-01-10 19:59:05] 2026-01-11 00:58:18,003 | INFO     | mean x: 1768047597.003406
[2026-01-10 19:59:05] 2026-01-11 00:58:18,003 | INFO     | mean y: 2516601.7173024523
[2026-01-10 19:59:05] 2026-01-11 00:58:18,003 | INFO     | intersect: -1575432371.1603882
[2026-01-10 19:59:05] 2026-01-11 00:58:18,013 | INFO     | chi2: 0.6058366160284772
[2026-01-10 19:59:05] 2026-01-11 00:58:18,032 | INFO     | current memory leak: 0.89 B/s (using 1468 data points, chi2=0.61)
[2026-01-10 19:59:05] 2026-01-11 00:58:18,035 | INFO     | could have reported an average CPU frequency of 999 MHz (53 samples)
[2026-01-10 19:59:05] 2026-01-11 00:58:18,035 | INFO     | ..............................
[2026-01-10 19:59:05] 2026-01-11 00:58:18,054 | INFO     | . Timing measurements:
[2026-01-10 19:59:05] 2026-01-11 00:58:18,054 | INFO     | . get job = 1 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,054 | INFO     | . initial setup = 11 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,054 | INFO     | . payload setup = 76 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,055 | INFO     | . stage-in = 0 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,055 | INFO     | . payload execution = 91427 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,055 | INFO     | . stage-out = 21 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,055 | INFO     | . log creation = 5 s
[2026-01-10 19:59:05] 2026-01-11 00:58:18,055 | INFO     | ..............................
[2026-01-10 19:59:05] 2026-01-11 00:58:20,029 | INFO     | time since job start (91698s) is within the limit (349056.0s)
[2026-01-10 19:59:05] 2026-01-11 00:58:20,107 | INFO     | 
[2026-01-10 19:59:05] 2026-01-11 00:58:20,108 | INFO     | job summary report
[2026-01-10 19:59:05] 2026-01-11 00:58:20,108 | INFO     | --------------------------------------------------
[2026-01-10 19:59:05] 2026-01-11 00:58:20,108 | INFO     | PanDA job id: 6963194323
[2026-01-10 19:59:05] 2026-01-11 00:58:20,108 | INFO     | task id: 47898826
[2026-01-10 19:59:05] 2026-01-11 00:58:20,108 | INFO     | errors: (none)
[2026-01-10 19:59:05] 2026-01-11 00:58:20,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:59:05] 2026-01-11 00:58:20,109 | INFO     | pilot state: finished 
[2026-01-10 19:59:05] 2026-01-11 00:58:20,109 | INFO     | transexitcode: 0
[2026-01-10 19:59:05] 2026-01-11 00:58:20,109 | INFO     | exeerrorcode: 0
[2026-01-10 19:59:05] 2026-01-11 00:58:20,109 | INFO     | exeerrordiag: 
[2026-01-10 19:59:05] 2026-01-11 00:58:20,110 | INFO     | exitcode: 0
[2026-01-10 19:59:05] 2026-01-11 00:58:20,110 | INFO     | exitmsg: OK
[2026-01-10 19:59:05] 2026-01-11 00:58:20,110 | INFO     | cpuconsumptiontime: 155465 s
[2026-01-10 19:59:05] 2026-01-11 00:58:20,110 | INFO     | nevents: 400
[2026-01-10 19:59:05] 2026-01-11 00:58:20,110 | INFO     | neventsw: 0
[2026-01-10 19:59:05] 2026-01-11 00:58:20,131 | INFO     | pid: 3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:20,131 | INFO     | pgrp: 3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:20,131 | INFO     | corecount: 8
[2026-01-10 19:59:05] 2026-01-11 00:58:20,132 | INFO     | event service: False
[2026-01-10 19:59:05] 2026-01-11 00:58:20,132 | INFO     | sizes: {0: 2283143, 2: 2283828, 4: 2283828, 5: 2284027, 6: 2284083, 8: 2284111, 21: 2284267, 33: 2284295, 44: 2284351, 49: 2284641, 57: 2284669, 91505: 2347246, 91
[2026-01-10 19:59:05] 2026-01-11 00:58:20,132 | INFO     | --------------------------------------------------
[2026-01-10 19:59:05] 2026-01-11 00:58:20,132 | INFO     | 
[2026-01-10 19:59:05] 2026-01-11 00:58:20,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 19:59:05] 2026-01-11 00:58:20,473 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,474 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,475 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:59:05] 2026-01-11 00:58:20,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:59:05] 2026-01-11 00:58:20,492 | INFO     | job 6963194323 has completed (purged errors)
[2026-01-10 19:59:05] 2026-01-11 00:58:20,492 | INFO     | overall cleanup function is called
[2026-01-10 19:59:05] 2026-01-11 00:58:21,542 | INFO     | --- collectZombieJob: --- 10, [3607547]
[2026-01-10 19:59:05] 2026-01-11 00:58:21,542 | INFO     | zombie collector waiting for pid 3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:21,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:59:05] 2026-01-11 00:58:21,543 | INFO     | collected zombie processes
[2026-01-10 19:59:05] 2026-01-11 00:58:21,543 | INFO     | will attempt to kill all subprocesses of pid=3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:27,859 | INFO     | process IDs to be killed: [3607547] (in reverse order)
[2026-01-10 19:59:05] 2026-01-11 00:58:28,282 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:59:05] 2026-01-11 00:58:28,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:59:05] 2026-01-11 00:58:28,476 | INFO     | did not find any defunct processes belonging to 3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:28,605 | INFO     | did not find any defunct processes belonging to 3607547
[2026-01-10 19:59:05] 2026-01-11 00:58:28,619 | INFO     | ready for new job
[2026-01-10 19:59:05] 2026-01-11 00:58:28,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:59:05] 2026-01-11 00:58:28,654 | INFO     | ***************************************
[2026-01-10 19:59:05] 2026-01-11 00:58:28,654 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:59:05] 2026-01-11 00:58:28,654 | INFO     | ***************************************
[2026-01-10 19:59:05] 2026-01-11 00:58:28,669 | INFO     | 
[2026-01-10 19:59:05] 2026-01-11 00:58:28,727 | INFO     | architecture information:
[2026-01-10 19:59:05] 2026-01-11 00:58:28,742 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:59:05] 2026-01-11 00:58:28,866 | INFO     | cat /etc/os-release:
[2026-01-10 19:59:05] NAME="CentOS Linux"
[2026-01-10 19:59:05] VERSION="7 (Core)"
[2026-01-10 19:59:05] ID="centos"
[2026-01-10 19:59:05] ID_LIKE="rhel fedora"
[2026-01-10 19:59:05] VERSION_ID="7"
[2026-01-10 19:59:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:59:05] ANSI_COLOR="0;31"
[2026-01-10 19:59:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:59:05] HOME_URL="https://www.centos.org/"
[2026-01-10 19:59:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:59:05] 
[2026-01-10 19:59:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:59:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:59:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:59:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:59:05] 
[2026-01-10 19:59:05] 2026-01-11 00:58:28,867 | INFO     | ***************************************
[2026-01-10 19:59:05] 2026-01-11 00:58:29,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 19:59:05] 2026-01-11 00:58:29,542 | INFO     | sufficient remaining disk space (95313461248 B)
[2026-01-10 19:59:05] 2026-01-11 00:58:29,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:59:05] 2026-01-11 00:58:29,543 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:59:05] 2026-01-11 00:58:29,544 | INFO     | update_server=False
[2026-01-10 19:59:05] 2026-01-11 00:58:29,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:59:05] 2026-01-11 00:58:29,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:59:05] 2026-01-11 00:58:29,545 | INFO     | aborting loop
[2026-01-10 19:59:05] 2026-01-11 00:58:29,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:59:05] 2026-01-11 00:58:29,926 | INFO     | all data control threads have been joined
[2026-01-10 19:59:05] 2026-01-11 00:58:30,330 | INFO     | all job control threads have been joined
[2026-01-10 19:59:05] 2026-01-11 00:58:30,550 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,559 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,561 | INFO     | [job] validate thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,566 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,671 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:59:05] 2026-01-11 00:58:30,793 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:30,932 | INFO     | [data] control thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,025 | INFO     | all payload control threads have been joined
[2026-01-10 19:59:05] 2026-01-11 00:58:31,336 | INFO     | [job] control thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,454 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,511 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,518 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,525 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,530 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:31,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:59:05] 2026-01-11 00:58:32,031 | INFO     | [payload] control thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:32,699 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:35,549 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:59:05] 2026-01-11 00:58:50,917 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:59:05] 2026-01-11 00:58:51,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742669563712)>', '<ExcThread(monitor, started 139742297437952)>']
[2026-01-10 19:59:05] 2026-01-11 00:58:56,745 | INFO     | all workflow threads have been joined
[2026-01-10 19:59:05] 2026-01-11 00:58:56,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:59:05] 2026-01-11 00:58:56,821 | INFO     | traces error code: 0
[2026-01-10 19:59:05] 2026-01-11 00:58:56,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:59:05] 2026-01-11 00:59:01,650 | INFO     | PID=3575936 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:59:05] 2026-01-11 00:59:01,659 | INFO     | .. there are 15 such processes running
[2026-01-10 19:59:05] 2026-01-11 00:59:01,661 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:59:05] 2026-01-11 00:59:01,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:59:05] 2026-01-11 00:59:01,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:59:05] 2026-01-11 00:59:01,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:59:05] 2026-01-11 00:59:01,662 | INFO     | [monitor] control thread has ended
[2026-01-10 19:59:05] 2026-01-11 00:59:03,041 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:59:05] 2026-01-11 00:59:03,058 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:59:05] 2026-01-11 00:59:03,094 [wrapper] pilotpid: 3575936
[2026-01-10 19:59:05] 2026-01-11 00:59:03,155 [wrapper] Pilot exit status: 0
[2026-01-10 19:59:05] 2026-01-11 00:59:03,325 [wrapper] pandaids: 6963194323
[2026-01-10 19:59:05] 2026-01-11 00:59:04,547 [wrapper] cleanup supervisor_pilot 2622777 3575937
[2026-01-10 19:59:05] 2026-01-11 00:59:04,591 [wrapper] Test setup, not cleaning
[2026-01-10 19:59:05] 2026-01-11 00:59:04,658 [wrapper] apfmon messages muted
[2026-01-10 19:59:05] 2026-01-11 00:59:04,690 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:59:05] 2026-01-11 00:59:04,734 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:59:05]  *** Error codes and diagnostics ***
[2026-01-10 19:59:05]     "exeErrorCode": 0,
[2026-01-10 19:59:05]     "exeErrorDiag": "",
[2026-01-10 19:59:05]     "pilotErrorCode": 0,
[2026-01-10 19:59:05]     "pilotErrorDiag": "",
[2026-01-10 19:59:05]  *** Listing of results directory ***
[2026-01-10 19:59:05] total 466880
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 19:59:05] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:59:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:28 run_atlas
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:28 job.xml
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas 223680742 Jan  9 18:28 EVNT.47898824._001514.pool.root.1
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:28 start_atlas.sh
[2026-01-10 19:59:05] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:28 shared
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 18:28 input.tar.gz
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:28 boinc_lockfile
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 18:28 pandaJob.out
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas        57 Jan  9 18:28 setup.sh.local
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas    989374 Jan  9 18:29 agis_schedconf.cvmfs.json
[2026-01-10 19:59:05] drwx------. 5 boincer umatlas      4096 Jan  9 18:30 pilot3
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas 229864375 Jan 10 19:52 HITS.47898826._039386.pool.root.1
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas       532 Jan 10 19:52 boinc_task_state.xml
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas      1036 Jan 10 19:56 memory_monitor_summary.json
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:57 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas   1269499 Jan 10 19:57 log.47898826._039386.job.log.tgz.1
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas      6859 Jan 10 19:58 init_data.xml
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas      7831 Jan 10 19:58 heartbeat.json
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:58 boinc_mmap_file
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas        29 Jan 10 19:58 wrapper_checkpoint.txt
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas        95 Jan 10 19:59 pilot_heartbeat.json
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas       823 Jan 10 19:59 pilotlog.txt
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas   9047992 Jan 10 19:59 log.47898826._039386.job.log.1
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas       357 Jan 10 19:59 output.list
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:59 runtime_log
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas  10332160 Jan 10 19:59 result.tar.gz
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 19:59 runtime_log.err
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas       662 Jan 10 19:59 OZUMDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbDhKDmW5ogHm.diag
[2026-01-10 19:59:05] -rw-r--r--. 1 boincer umatlas     21423 Jan 10 19:59 stderr.txt
[2026-01-10 19:59:05] HITS file was successfully produced:
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas 229864375 Jan 10 19:52 shared/HITS.pool.root.1
[2026-01-10 19:59:05]  *** Contents of shared directory: ***
[2026-01-10 19:59:05] total 453612
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas 223680742 Jan  9 18:28 ATLAS.root_0
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:28 start_atlas.sh
[2026-01-10 19:59:05] -rw-r--r--. 2 boincer umatlas    592406 Jan  9 18:28 input.tar.gz
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas 229864375 Jan 10 19:52 HITS.pool.root.1
[2026-01-10 19:59:05] -rw-------. 1 boincer umatlas  10332160 Jan 10 19:59 result.tar.gz
19:59:07 (3568802): run_atlas exited; CPU time 163091.909342
19:59:07 (3568802): called boinc_finish(0)

</stderr_txt>
]]>

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