Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:31:36 (2099722): wrapper (7.7.26015): starting
18:31:36 (2099722): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:31:36] Arguments: --nthreads 8
[2026-01-09 18:31:36] Threads: 8
[2026-01-09 18:31:36] Checking for CVMFS
[2026-01-09 18:31:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:31:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:31:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:31:38] 2.13.3.0 11958 23539 186320 154961 1 527 27543548 40960001 19346 16776704 0 35860134 99.768 24209765 42338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:31:38] CVMFS is ok
[2026-01-09 18:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:31:38] Further information can be found at the LHC@home message board.
[2026-01-09 18:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:31:38] Checking for apptainer binary...
[2026-01-09 18:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:31:38] Running /usr/bin/apptainer --version
[2026-01-09 18:31:38] apptainer version 1.4.5-2.el9
[2026-01-09 18:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:31:39] c-212-1.aglt2.org
[2026-01-09 18:31:39] apptainer works
[2026-01-09 18:31:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:31:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:31:39] Starting ATLAS job with PandaID=6963188953
[2026-01-09 18:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:20:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:20:39] 2026-01-10 03:19:43,965 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3191.8099687499994
[2026-01-09 22:20:39] 2026-01-10 03:19:43,996 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963188953/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:20:39] 2026-01-10 03:19:43,996 | INFO     | extracted standard info from prmon json
[2026-01-09 22:20:39] 2026-01-10 03:19:43,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:20:39] 2026-01-10 03:19:43,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:20:39] 2026-01-10 03:19:43,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:20:39] 2026-01-10 03:19:43,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:20:39] 2026-01-10 03:19:44,001 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:20:39] 2026-01-10 03:19:44,002 | INFO     | sum of square deviations: 3438591851.121072
[2026-01-09 22:20:39] 2026-01-10 03:19:44,003 | INFO     | sum of deviations: -21648743548.260094
[2026-01-09 22:20:39] 2026-01-10 03:19:44,003 | INFO     | mean x: 1768008362.0627804
[2026-01-09 22:20:39] 2026-01-10 03:19:44,003 | INFO     | mean y: 2500258.161434978
[2026-01-09 22:20:39] 2026-01-10 03:19:44,003 | INFO     | intersect: 11133556597.10954
[2026-01-09 22:20:39] 2026-01-10 03:19:44,003 | INFO     | chi2: 3.930177109366925
[2026-01-09 22:20:39] 2026-01-10 03:19:44,004 | INFO     | sum of square deviations: 3212443043.600914
[2026-01-09 22:20:39] 2026-01-10 03:19:44,005 | INFO     | sum of deviations: 6460460175.307327
[2026-01-09 22:20:39] 2026-01-10 03:19:44,005 | INFO     | mean x: 1768008209.5642202
[2026-01-09 22:20:39] 2026-01-10 03:19:44,005 | INFO     | mean y: 2518955.0137614678
[2026-01-09 22:20:39] 2026-01-10 03:19:44,005 | INFO     | intersect: -3553076108.4562707
[2026-01-09 22:20:39] 2026-01-10 03:19:44,013 | INFO     | chi2: 2.567096850669107
[2026-01-09 22:20:39] 2026-01-10 03:19:44,013 | INFO     | current chi2=2.567096850669107 (change=34.682413050779374 %)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,013 | INFO     | sum of square deviations: 2996433961.0798144
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | sum of deviations: 5998180728.45538
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | mean x: 1768008057.0657277
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | mean y: 2518628.6103286385
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | intersect: -3536632239.8519487
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | chi2: 2.5670200345827934
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | current chi2=2.5670200345827934 (change=0.0029923330042487713 %)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,015 | INFO     | right removable region: 212
[2026-01-09 22:20:39] 2026-01-10 03:19:44,016 | INFO     | sum of square deviations: 3212434503.600914
[2026-01-09 22:20:39] 2026-01-10 03:19:44,017 | INFO     | sum of deviations: -71115417107.96794
[2026-01-09 22:20:39] 2026-01-10 03:19:44,017 | INFO     | mean x: 1768008514.5642202
[2026-01-09 22:20:39] 2026-01-10 03:19:44,017 | INFO     | mean y: 2533412.747706422
[2026-01-09 22:20:39] 2026-01-10 03:19:44,017 | INFO     | intersect: 39141903514.37493
[2026-01-09 22:20:39] 2026-01-10 03:19:44,017 | INFO     | chi2: 1.714890763022768
[2026-01-09 22:20:39] 2026-01-10 03:19:44,018 | INFO     | current chi2=1.714890763022768 (change=56.366069128650444 %)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,018 | INFO     | sum of square deviations: 2996416881.0798144
[2026-01-09 22:20:39] 2026-01-10 03:19:44,019 | INFO     | sum of deviations: -74371362434.23941
[2026-01-09 22:20:39] 2026-01-10 03:19:44,019 | INFO     | mean x: 1768008667.0657277
[2026-01-09 22:20:39] 2026-01-10 03:19:44,019 | INFO     | mean y: 2535675.8028169014
[2026-01-09 22:20:39] 2026-01-10 03:19:44,019 | INFO     | intersect: 43884685117.517746
[2026-01-09 22:20:39] 2026-01-10 03:19:44,020 | INFO     | chi2: 1.6715340247628299
[2026-01-09 22:20:39] 2026-01-10 03:19:44,020 | INFO     | current chi2=1.6715340247628299 (change=2.5282507314643814 %)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,020 | INFO     | left removable region: 20
[2026-01-09 22:20:39] 2026-01-10 03:19:44,020 | INFO     | sum of square deviations: 2194638980.9791594
[2026-01-09 22:20:39] 2026-01-10 03:19:44,021 | INFO     | sum of deviations: -28723633529.166676
[2026-01-09 22:20:39] 2026-01-10 03:19:44,021 | INFO     | mean x: 1768008636.5729167
[2026-01-09 22:20:39] 2026-01-10 03:19:44,025 | INFO     | mean y: 2542666.0833333335
[2026-01-09 22:20:39] 2026-01-10 03:19:44,025 | INFO     | intersect: 23142399650.973156
[2026-01-09 22:20:39] 2026-01-10 03:19:44,025 | INFO     | chi2: 0.180366276144859
[2026-01-09 22:20:39] 2026-01-10 03:19:44,025 | INFO     | current memory leak: -13.09 B/s (using 192 data points, chi2=0.18)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | could have reported an average CPU frequency of 3192 MHz (11 samples)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | ..............................
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . Timing measurements:
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . get job = 0 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . initial setup = 4 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . payload setup = 18 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . stage-in = 0 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . payload execution = 13583 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,026 | INFO     | . stage-out = 3 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,027 | INFO     | . log creation = 0 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,027 | INFO     | ..............................
[2026-01-09 22:20:39] 2026-01-10 03:19:44,211 | INFO     | 
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | job summary report
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | --------------------------------------------------
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | PanDA job id: 6963188953
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | task id: 47898826
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | errors: (none)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | pilot state: finished 
[2026-01-09 22:20:39] 2026-01-10 03:19:44,215 | INFO     | transexitcode: 0
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | exeerrorcode: 0
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | exeerrordiag: 
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | exitcode: 0
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | exitmsg: OK
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | cpuconsumptiontime: 45877 s
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | nevents: 400
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | neventsw: 0
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | pid: 2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | pgrp: 2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | corecount: 8
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | event service: False
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | sizes: {0: 2283800, 1: 2283999, 11: 2284289, 13606: 2314911, 13610: 2323909, 13612: 2323965, 13630: 2324287}
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | --------------------------------------------------
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | 
[2026-01-09 22:20:39] 2026-01-10 03:19:44,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 22:20:39] 2026-01-10 03:19:44,331 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,331 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,332 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,333 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:20:39] 2026-01-10 03:19:44,333 | INFO     | job 6963188953 has completed (purged errors)
[2026-01-09 22:20:39] 2026-01-10 03:19:44,333 | INFO     | overall cleanup function is called
[2026-01-09 22:20:39] 2026-01-10 03:19:45,180 | INFO     | PID=2104986 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:20:39] 2026-01-10 03:19:45,180 | INFO     | .. there are 16 such processes running
[2026-01-09 22:20:39] 2026-01-10 03:19:45,388 | INFO     | --- collectZombieJob: --- 10, [2112597]
[2026-01-09 22:20:39] 2026-01-10 03:19:45,388 | INFO     | zombie collector waiting for pid 2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:45,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:20:39] 2026-01-10 03:19:45,388 | INFO     | collected zombie processes
[2026-01-09 22:20:39] 2026-01-10 03:19:45,388 | INFO     | will attempt to kill all subprocesses of pid=2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:45,836 | INFO     | process IDs to be killed: [2112597] (in reverse order)
[2026-01-09 22:20:39] 2026-01-10 03:19:45,951 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:20:39] 2026-01-10 03:19:45,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:20:39] 2026-01-10 03:19:45,964 | INFO     | did not find any defunct processes belonging to 2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:45,977 | INFO     | did not find any defunct processes belonging to 2112597
[2026-01-09 22:20:39] 2026-01-10 03:19:45,977 | INFO     | ready for new job
[2026-01-09 22:20:39] 2026-01-10 03:19:45,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:20:39] 2026-01-10 03:19:45,979 | INFO     | ***************************************
[2026-01-09 22:20:39] 2026-01-10 03:19:45,979 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:20:39] 2026-01-10 03:19:45,979 | INFO     | ***************************************
[2026-01-09 22:20:39] 2026-01-10 03:19:45,979 | INFO     | 
[2026-01-09 22:20:39] 2026-01-10 03:19:45,984 | INFO     | architecture information:
[2026-01-09 22:20:39] 2026-01-10 03:19:45,984 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:20:39] 2026-01-10 03:19:46,001 | INFO     | cat /etc/os-release:
[2026-01-09 22:20:39] NAME="CentOS Linux"
[2026-01-09 22:20:39] VERSION="7 (Core)"
[2026-01-09 22:20:39] ID="centos"
[2026-01-09 22:20:39] ID_LIKE="rhel fedora"
[2026-01-09 22:20:39] VERSION_ID="7"
[2026-01-09 22:20:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:20:39] ANSI_COLOR="0;31"
[2026-01-09 22:20:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:20:39] HOME_URL="https://www.centos.org/"
[2026-01-09 22:20:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:20:39] 
[2026-01-09 22:20:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:20:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:20:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:20:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:20:39] 
[2026-01-09 22:20:39] 2026-01-10 03:19:46,001 | INFO     | ***************************************
[2026-01-09 22:20:39] 2026-01-10 03:19:46,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 22:20:39] 2026-01-10 03:19:46,649 | INFO     | sufficient remaining disk space (127521521664 B)
[2026-01-09 22:20:39] 2026-01-10 03:19:46,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:20:39] 2026-01-10 03:19:46,650 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:20:39] 2026-01-10 03:19:46,650 | INFO     | update_server=False
[2026-01-09 22:20:39] 2026-01-10 03:19:46,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:20:39] 2026-01-10 03:19:46,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:20:39] 2026-01-10 03:19:46,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:20:39] 2026-01-10 03:19:46,947 | INFO     | all data control threads have been joined
[2026-01-09 22:20:39] 2026-01-10 03:19:47,039 | INFO     | all payload control threads have been joined
[2026-01-09 22:20:39] 2026-01-10 03:19:47,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:20:39] 2026-01-10 03:19:47,651 | INFO     | aborting loop
[2026-01-09 22:20:39] 2026-01-10 03:19:47,656 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:47,772 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:47,959 | INFO     | [data] control thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,026 | INFO     | [job] validate thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,045 | INFO     | [payload] control thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,134 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,266 | INFO     | all job control threads have been joined
[2026-01-09 22:20:39] 2026-01-10 03:19:48,644 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,657 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,742 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:48,818 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:49,046 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:49,050 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:49,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:20:39] 2026-01-10 03:19:49,273 | INFO     | [job] control thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:50,233 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:50,659 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:19:56,960 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:20:39] 2026-01-10 03:19:57,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:20:39] 2026-01-10 03:20:17,839 | INFO     | PID=2104986 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:20:39] 2026-01-10 03:20:17,839 | INFO     | .. there are 16 such processes running
[2026-01-09 22:20:39] 2026-01-10 03:20:17,840 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:20:39] 2026-01-10 03:20:17,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:20:39] 2026-01-10 03:20:17,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:20:39] 2026-01-10 03:20:32,270 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:20:39] 2026-01-10 03:20:33,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791793788736)>', '<ExcThread(monitor, started 139791446304512)>']
[2026-01-09 22:20:39] 2026-01-10 03:20:33,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:20:39] 2026-01-10 03:20:33,946 | INFO     | [monitor] control thread has ended
[2026-01-09 22:20:39] 2026-01-10 03:20:38,261 | INFO     | all workflow threads have been joined
[2026-01-09 22:20:39] 2026-01-10 03:20:38,261 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:20:39] 2026-01-10 03:20:38,261 | INFO     | traces error code: 0
[2026-01-09 22:20:39] 2026-01-10 03:20:38,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:20:39] 2026-01-10 03:20:38,741 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:20:39] 2026-01-10 03:20:38,784 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:20:39] 2026-01-10 03:20:38,815 [wrapper] pilotpid: 2104986
[2026-01-09 22:20:39] 2026-01-10 03:20:38,853 [wrapper] Pilot exit status: 0
[2026-01-09 22:20:39] 2026-01-10 03:20:38,905 [wrapper] pandaids: 6963188953
[2026-01-09 22:20:39] 2026-01-10 03:20:38,993 [wrapper] cleanup supervisor_pilot 2557820 2104987
[2026-01-09 22:20:39] 2026-01-10 03:20:38,996 [wrapper] Test setup, not cleaning
[2026-01-09 22:20:39] 2026-01-10 03:20:39,001 [wrapper] apfmon messages muted
[2026-01-09 22:20:39] 2026-01-10 03:20:39,006 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:20:39] 2026-01-10 03:20:39,014 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:20:39]  *** Error codes and diagnostics ***
[2026-01-09 22:20:39]     "exeErrorCode": 0,
[2026-01-09 22:20:39]     "exeErrorDiag": "",
[2026-01-09 22:20:39]     "pilotErrorCode": 0,
[2026-01-09 22:20:39]     "pilotErrorDiag": "",
[2026-01-09 22:20:39]  *** Listing of results directory ***
[2026-01-09 22:20:39] total 449088
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 22:20:39] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:20:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:31 run_atlas
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:31 job.xml
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 18:31 EVNT.47898824._001454.pool.root.1
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:31 start_atlas.sh
[2026-01-09 22:20:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:31 shared
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 18:31 input.tar.gz
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:31 boinc_lockfile
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 18:31 pandaJob.out
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas        57 Jan  9 18:31 setup.sh.local
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas    989374 Jan  9 18:32 agis_schedconf.cvmfs.json
[2026-01-09 22:20:39] drwx------. 5 boincer umatlas      4096 Jan  9 18:32 pilot3
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas 226960730 Jan  9 22:17 HITS.47898826._037890.pool.root.1
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas       530 Jan  9 22:17 boinc_task_state.xml
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas      6954 Jan  9 22:18 init_data.xml
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas      1030 Jan  9 22:19 memory_monitor_summary.json
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas    457962 Jan  9 22:19 log.47898826._037890.job.log.tgz.1
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas      7772 Jan  9 22:19 heartbeat.json
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas        95 Jan  9 22:20 pilot_heartbeat.json
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:20 boinc_mmap_file
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:20 wrapper_checkpoint.txt
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas      4897 Jan  9 22:20 pilotlog.txt
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas   1851566 Jan  9 22:20 log.47898826._037890.job.log.1
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas       357 Jan  9 22:20 output.list
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:20 runtime_log
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas   2324480 Jan  9 22:20 result.tar.gz
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas       655 Jan  9 22:20 x7xLDmLFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ9gKDmt2p4im.diag
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 22:20 runtime_log.err
[2026-01-09 22:20:39] -rw-r--r--. 1 boincer umatlas     21257 Jan  9 22:20 stderr.txt
[2026-01-09 22:20:39] HITS file was successfully produced:
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas 226960730 Jan  9 22:17 shared/HITS.pool.root.1
[2026-01-09 22:20:39]  *** Contents of shared directory: ***
[2026-01-09 22:20:39] total 443632
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 18:31 ATLAS.root_0
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:31 start_atlas.sh
[2026-01-09 22:20:39] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 18:31 input.tar.gz
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas 226960730 Jan  9 22:17 HITS.pool.root.1
[2026-01-09 22:20:39] -rw-------. 1 boincer umatlas   2324480 Jan  9 22:20 result.tar.gz
22:20:41 (2099722): run_atlas exited; CPU time 46243.096583
22:20:41 (2099722): called boinc_finish(0)

</stderr_txt>
]]>

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