Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:30 (3468084): wrapper (7.7.26015): starting
17:00:30 (3468084): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:00:30] Arguments: --nthreads 8
[2026-01-09 17:00:30] Threads: 8
[2026-01-09 17:00:30] Checking for CVMFS
[2026-01-09 17:00:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:00:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:00:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:00:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:00:31] 2.13.3.0 11959 93984 350012 154957 2 177 21854068 32935936 16230 16776704 0 396204083 99.495 549710173 34169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 17:00:31] CVMFS is ok
[2026-01-09 17:00:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:00:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:00:31] Further information can be found at the LHC@home message board.
[2026-01-09 17:00:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:00:31] Checking for apptainer binary...
[2026-01-09 17:00:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:00:31] Running /usr/bin/apptainer --version
[2026-01-09 17:00:32] apptainer version 1.4.5-2.el9
[2026-01-09 17:00:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:00:32] c6-8-25-4.aglt2.org
[2026-01-09 17:00:32] apptainer works
[2026-01-09 17:00:32] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:00:32] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:00:32] Starting ATLAS job with PandaID=6963189650
[2026-01-09 17:00:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:11:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:11:43] 2026-01-10 05:11:02,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:11:43] 2026-01-10 05:11:02,237 | INFO     | time since job start (25763s) is within the limit (349056.0s)
[2026-01-10 00:11:43] 2026-01-10 05:11:04,244 | INFO     | time since job start (25765s) is within the limit (349056.0s)
[2026-01-10 00:11:43] 2026-01-10 05:11:04,592 | INFO     | monitor loop #1495: job 0:6963189650 is in state 'finished'
[2026-01-10 00:11:43] 2026-01-10 05:11:04,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:11:43] 2026-01-10 05:11:06,251 | INFO     | time since job start (25767s) is within the limit (349056.0s)
[2026-01-10 00:11:43] 2026-01-10 05:11:07,100 | INFO     | monitor loop #1496: job 0:6963189650 is in state 'finished'
[2026-01-10 00:11:43] 2026-01-10 05:11:07,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,025 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 00:11:43] 2026-01-10 05:11:08,083 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2665.92446875
[2026-01-10 00:11:43] 2026-01-10 05:11:08,164 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963189650/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,165 | INFO     | extracted standard info from prmon json
[2026-01-10 00:11:43] 2026-01-10 05:11:08,165 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:11:43] 2026-01-10 05:11:08,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:11:43] 2026-01-10 05:11:08,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:11:43] 2026-01-10 05:11:08,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:11:43] 2026-01-10 05:11:08,212 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:11:43] 2026-01-10 05:11:08,213 | INFO     | sum of square deviations: 22973025092.961864
[2026-01-10 00:11:43] 2026-01-10 05:11:08,230 | INFO     | sum of deviations: 108400030966.43799
[2026-01-10 00:11:43] 2026-01-10 05:11:08,230 | INFO     | mean x: 1768009001.7761905
[2026-01-10 00:11:43] 2026-01-10 05:11:08,230 | INFO     | mean y: 2510919.3238095236
[2026-01-10 00:11:43] 2026-01-10 05:11:08,230 | INFO     | intersect: -8339979012.496085
[2026-01-10 00:11:43] 2026-01-10 05:11:08,231 | INFO     | chi2: 2.8357825765834614
[2026-01-10 00:11:43] 2026-01-10 05:11:08,244 | INFO     | sum of square deviations: 22162284889.132553
[2026-01-10 00:11:43] 2026-01-10 05:11:08,261 | INFO     | sum of deviations: 132801748085.93973
[2026-01-10 00:11:43] 2026-01-10 05:11:08,261 | INFO     | mean x: 1768008849.2771084
[2026-01-10 00:11:43] 2026-01-10 05:11:08,261 | INFO     | mean y: 2515460.7831325303
[2026-01-10 00:11:43] 2026-01-10 05:11:08,261 | INFO     | intersect: -10591819328.701687
[2026-01-10 00:11:43] 2026-01-10 05:11:08,262 | INFO     | chi2: 2.154806227020108
[2026-01-10 00:11:43] 2026-01-10 05:11:08,262 | INFO     | current chi2=2.154806227020108 (change=24.01370102159916 %)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,262 | INFO     | right removable region: 414
[2026-01-10 00:11:43] 2026-01-10 05:11:08,263 | INFO     | sum of square deviations: 22162239627.57596
[2026-01-10 00:11:43] 2026-01-10 05:11:08,276 | INFO     | time since job start (25769s) is within the limit (349056.0s)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,280 | INFO     | sum of deviations: 17774794084.696396
[2026-01-10 00:11:43] 2026-01-10 05:11:08,292 | INFO     | mean x: 1768009154.2795181
[2026-01-10 00:11:43] 2026-01-10 05:11:08,292 | INFO     | mean y: 2527908.881927711
[2026-01-10 00:11:43] 2026-01-10 05:11:08,292 | INFO     | intersect: -1415469513.0967615
[2026-01-10 00:11:43] 2026-01-10 05:11:08,293 | INFO     | chi2: 0.8372987146444029
[2026-01-10 00:11:43] 2026-01-10 05:11:08,293 | INFO     | current chi2=0.8372987146444029 (change=70.47380424866081 %)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,294 | INFO     | sum of square deviations: 21370807234.80243
[2026-01-10 00:11:43] 2026-01-10 05:11:08,310 | INFO     | sum of deviations: 1837962735.370739
[2026-01-10 00:11:43] 2026-01-10 05:11:08,311 | INFO     | mean x: 1768009306.7780488
[2026-01-10 00:11:43] 2026-01-10 05:11:08,311 | INFO     | mean y: 2530968.6634146343
[2026-01-10 00:11:43] 2026-01-10 05:11:08,311 | INFO     | intersect: -149523896.92700762
[2026-01-10 00:11:43] 2026-01-10 05:11:08,311 | INFO     | chi2: 0.7768922564341834
[2026-01-10 00:11:43] 2026-01-10 05:11:08,324 | INFO     | current chi2=0.7768922564341834 (change=7.2144453530988475 %)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,324 | INFO     | left removable region: 20
[2026-01-10 00:11:43] 2026-01-10 05:11:08,325 | INFO     | sum of square deviations: 18965276191.441673
[2026-01-10 00:11:43] 2026-01-10 05:11:08,341 | INFO     | sum of deviations: 15857571460.624353
[2026-01-10 00:11:43] 2026-01-10 05:11:08,341 | INFO     | mean x: 1768009428.7715735
[2026-01-10 00:11:43] 2026-01-10 05:11:08,341 | INFO     | mean y: 2538001.073604061
[2026-01-10 00:11:43] 2026-01-10 05:11:08,342 | INFO     | intersect: -1475760315.111985
[2026-01-10 00:11:43] 2026-01-10 05:11:08,342 | INFO     | chi2: 0.03576179602830579
[2026-01-10 00:11:43] 2026-01-10 05:11:08,342 | INFO     | current memory leak: 0.84 B/s (using 394 data points, chi2=0.04)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,343 | INFO     | could have reported an average CPU frequency of 2669 MHz (18 samples)
[2026-01-10 00:11:43] 2026-01-10 05:11:08,344 | INFO     | ..............................
[2026-01-10 00:11:43] 2026-01-10 05:11:08,344 | INFO     | . Timing measurements:
[2026-01-10 00:11:43] 2026-01-10 05:11:08,344 | INFO     | . get job = 0 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,344 | INFO     | . initial setup = 5 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,344 | INFO     | . payload setup = 34 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,345 | INFO     | . stage-in = 0 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,345 | INFO     | . payload execution = 25624 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,345 | INFO     | . stage-out = 6 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,345 | INFO     | . log creation = 0 s
[2026-01-10 00:11:43] 2026-01-10 05:11:08,345 | INFO     | ..............................
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | 
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | job summary report
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | --------------------------------------------------
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | PanDA job id: 6963189650
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | task id: 47898826
[2026-01-10 00:11:43] 2026-01-10 05:11:09,129 | INFO     | errors: (none)
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | pilot state: finished 
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | transexitcode: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | exeerrorcode: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | exeerrordiag: 
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | exitcode: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | exitmsg: OK
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | cpuconsumptiontime: 59752 s
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | nevents: 400
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | neventsw: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | pid: 3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | pgrp: 3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | corecount: 8
[2026-01-10 00:11:43] 2026-01-10 05:11:09,130 | INFO     | event service: False
[2026-01-10 00:11:43] 2026-01-10 05:11:09,131 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 14: 2284027, 25: 2284055, 32: 2284345, 36: 2284501, 25663: 2319995, 25670: 2328993, 25673: 2329049, 25705: 2329073}
[2026-01-10 00:11:43] 2026-01-10 05:11:09,131 | INFO     | --------------------------------------------------
[2026-01-10 00:11:43] 2026-01-10 05:11:09,131 | INFO     | 
[2026-01-10 00:11:43] 2026-01-10 05:11:09,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 00:11:43] 2026-01-10 05:11:09,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | job 6963189650 has completed (purged errors)
[2026-01-10 00:11:43] 2026-01-10 05:11:09,356 | INFO     | overall cleanup function is called
[2026-01-10 00:11:43] 2026-01-10 05:11:10,377 | INFO     | --- collectZombieJob: --- 10, [3486501]
[2026-01-10 00:11:43] 2026-01-10 05:11:10,377 | INFO     | zombie collector waiting for pid 3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:10,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:11:43] 2026-01-10 05:11:10,377 | INFO     | collected zombie processes
[2026-01-10 00:11:43] 2026-01-10 05:11:10,377 | INFO     | will attempt to kill all subprocesses of pid=3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:12,031 | INFO     | process IDs to be killed: [3486501] (in reverse order)
[2026-01-10 00:11:43] 2026-01-10 05:11:12,767 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:11:43] 2026-01-10 05:11:12,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:11:43] 2026-01-10 05:11:12,825 | INFO     | did not find any defunct processes belonging to 3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:12,875 | INFO     | did not find any defunct processes belonging to 3486501
[2026-01-10 00:11:43] 2026-01-10 05:11:12,875 | INFO     | ready for new job
[2026-01-10 00:11:43] 2026-01-10 05:11:12,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:11:43] 2026-01-10 05:11:12,886 | INFO     | ***************************************
[2026-01-10 00:11:43] 2026-01-10 05:11:12,886 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:11:43] 2026-01-10 05:11:12,886 | INFO     | ***************************************
[2026-01-10 00:11:43] 2026-01-10 05:11:12,886 | INFO     | 
[2026-01-10 00:11:43] 2026-01-10 05:11:12,899 | INFO     | architecture information:
[2026-01-10 00:11:43] 2026-01-10 05:11:12,903 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:11:43] 2026-01-10 05:11:13,045 | INFO     | cat /etc/os-release:
[2026-01-10 00:11:43] NAME="CentOS Linux"
[2026-01-10 00:11:43] VERSION="7 (Core)"
[2026-01-10 00:11:43] ID="centos"
[2026-01-10 00:11:43] ID_LIKE="rhel fedora"
[2026-01-10 00:11:43] VERSION_ID="7"
[2026-01-10 00:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:11:43] ANSI_COLOR="0;31"
[2026-01-10 00:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:11:43] HOME_URL="https://www.centos.org/"
[2026-01-10 00:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:11:43] 
[2026-01-10 00:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:11:43] 
[2026-01-10 00:11:43] 2026-01-10 05:11:13,045 | INFO     | ***************************************
[2026-01-10 00:11:43] 2026-01-10 05:11:13,549 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 00:11:43] 2026-01-10 05:11:13,737 | INFO     | sufficient remaining disk space (74410098688 B)
[2026-01-10 00:11:43] 2026-01-10 05:11:13,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:11:43] 2026-01-10 05:11:13,738 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:11:43] 2026-01-10 05:11:13,738 | INFO     | update_server=False
[2026-01-10 00:11:43] 2026-01-10 05:11:13,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:11:43] 2026-01-10 05:11:13,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:11:43] 2026-01-10 05:11:13,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:11:43] 2026-01-10 05:11:13,749 | INFO     | aborting loop
[2026-01-10 00:11:43] 2026-01-10 05:11:13,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:11:43] 2026-01-10 05:11:13,966 | INFO     | all data control threads have been joined
[2026-01-10 00:11:43] 2026-01-10 05:11:14,701 | INFO     | all job control threads have been joined
[2026-01-10 00:11:43] 2026-01-10 05:11:14,744 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:14,755 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:14,788 | INFO     | [job] validate thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:14,851 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:14,957 | INFO     | all payload control threads have been joined
[2026-01-10 00:11:43] 2026-01-10 05:11:14,969 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:14,978 | INFO     | [data] control thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:11:43] 2026-01-10 05:11:15,721 | INFO     | [job] control thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,722 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,754 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,754 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,756 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,784 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:15,973 | INFO     | [payload] control thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:16,002 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:16,313 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:19,292 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:11:43] 2026-01-10 05:11:25,478 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:11:43] 2026-01-10 05:11:26,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340564899648)>', '<ExcThread(monitor, started 140339927049984)>']
[2026-01-10 00:11:43] 2026-01-10 05:11:31,135 | INFO     | all workflow threads have been joined
[2026-01-10 00:11:43] 2026-01-10 05:11:31,135 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:11:43] 2026-01-10 05:11:31,135 | INFO     | traces error code: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:31,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:11:43] 2026-01-10 05:11:43,017 | INFO     | PID=3473640 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:11:43] 2026-01-10 05:11:43,018 | INFO     | .. there are 21 such processes running
[2026-01-10 00:11:43] 2026-01-10 05:11:43,019 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:11:43] 2026-01-10 05:11:43,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:11:43] 2026-01-10 05:11:43,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:11:43] 2026-01-10 05:11:43,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:11:43] 2026-01-10 05:11:43,019 | INFO     | [monitor] control thread has ended
[2026-01-10 00:11:43] 2026-01-10 05:11:43,227 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:11:43] 2026-01-10 05:11:43,284 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:11:43] 2026-01-10 05:11:43,296 [wrapper] pilotpid: 3473640
[2026-01-10 00:11:43] 2026-01-10 05:11:43,339 [wrapper] Pilot exit status: 0
[2026-01-10 00:11:43] 2026-01-10 05:11:43,416 [wrapper] pandaids: 6963189650
[2026-01-10 00:11:43] 2026-01-10 05:11:43,495 [wrapper] cleanup supervisor_pilot  531440 3473641
[2026-01-10 00:11:43] 2026-01-10 05:11:43,500 [wrapper] Test setup, not cleaning
[2026-01-10 00:11:43] 2026-01-10 05:11:43,532 [wrapper] apfmon messages muted
[2026-01-10 00:11:43] 2026-01-10 05:11:43,540 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:11:43] 2026-01-10 05:11:43,552 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:11:43]  *** Error codes and diagnostics ***
[2026-01-10 00:11:43]     "exeErrorCode": 0,
[2026-01-10 00:11:43]     "exeErrorDiag": "",
[2026-01-10 00:11:43]     "pilotErrorCode": 0,
[2026-01-10 00:11:43]     "pilotErrorDiag": "",
[2026-01-10 00:11:43]  *** Listing of results directory ***
[2026-01-10 00:11:44] total 447884
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 00:11:44] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:11:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:00 run_atlas
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:00 job.xml
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas 226879329 Jan  9 17:00 EVNT.47898824._001479.pool.root.1
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:00 start_atlas.sh
[2026-01-10 00:11:44] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:00 shared
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 17:00 input.tar.gz
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:00 boinc_lockfile
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 17:00 pandaJob.out
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas        57 Jan  9 17:00 setup.sh.local
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas    989398 Jan  9 17:01 agis_schedconf.cvmfs.json
[2026-01-10 00:11:44] drwx------. 5 boincer umatlas      4096 Jan  9 17:01 pilot3
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas 220366146 Jan 10 00:09 HITS.47898826._038519.pool.root.1
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas       531 Jan 10 00:09 boinc_task_state.xml
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas      1040 Jan 10 00:10 memory_monitor_summary.json
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas    607194 Jan 10 00:10 log.47898826._038519.job.log.tgz.1
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 00:10 init_data.xml
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas      7827 Jan 10 00:11 heartbeat.json
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:11 boinc_mmap_file
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:11 wrapper_checkpoint.txt
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas        95 Jan 10 00:11 pilot_heartbeat.json
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas       823 Jan 10 00:11 pilotlog.txt
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas   3127290 Jan 10 00:11 log.47898826._038519.job.log.1
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas       357 Jan 10 00:11 output.list
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:11 runtime_log
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas   3758080 Jan 10 00:11 result.tar.gz
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 00:11 runtime_log.err
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas       658 Jan 10 00:11 cynMDmYFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzAhKDmXyltVo.diag
[2026-01-10 00:11:44] -rw-r--r--. 1 boincer umatlas     21460 Jan 10 00:11 stderr.txt
[2026-01-10 00:11:44] HITS file was successfully produced:
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas 220366146 Jan 10 00:09 shared/HITS.pool.root.1
[2026-01-10 00:11:44]  *** Contents of shared directory: ***
[2026-01-10 00:11:44] total 441040
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas 226879329 Jan  9 17:00 ATLAS.root_0
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:00 start_atlas.sh
[2026-01-10 00:11:44] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 17:00 input.tar.gz
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas 220366146 Jan 10 00:09 HITS.pool.root.1
[2026-01-10 00:11:44] -rw-------. 1 boincer umatlas   3758080 Jan 10 00:11 result.tar.gz
00:11:45 (3468084): run_atlas exited; CPU time 60874.528693
00:11:45 (3468084): called boinc_finish(0)

</stderr_txt>
]]>

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