Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:50:08 (2918328): wrapper (7.7.26015): starting
21:50:08 (2918328): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 21:50:08] Arguments: --nthreads 12
[2026-01-09 21:50:08] Threads: 12
[2026-01-09 21:50:08] Checking for CVMFS
[2026-01-09 21:50:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:50:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:50:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:50:10] 2.13.3.0 2571963 905 53044 154956 0 16 4029282 4097025 923 130560 0 725155 99.989 37035 20853 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 21:50:10] CVMFS is ok
[2026-01-09 21:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:50:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:50:10] Further information can be found at the LHC@home message board.
[2026-01-09 21:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:50:10] Checking for apptainer binary...
[2026-01-09 21:50:10] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 21:50:10] apptainer is not installed, using version from CVMFS
[2026-01-09 21:50:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:50:11] pckelar5.cern.ch
[2026-01-09 21:50:11] apptainer works
[2026-01-09 21:50:11] Set ATHENA_PROC_NUMBER=12
[2026-01-09 21:50:11] Set ATHENA_CORE_NUMBER=12
[2026-01-09 21:50:11] Starting ATLAS job with PandaID=6963160859
[2026-01-09 21:50:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:44:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:44:14] 2026-01-09 23:43:36,415 | INFO     | time since job start (10380s) is within the limit (349056.0s)
[2026-01-10 00:44:14] 2026-01-09 23:43:37,595 | INFO     | monitor loop #759: job 0:6963160859 is in state 'finished'
[2026-01-10 00:44:14] 2026-01-09 23:43:37,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:44:14] 2026-01-09 23:43:38,420 | INFO     | time since job start (10382s) is within the limit (349056.0s)
[2026-01-10 00:44:14] 2026-01-09 23:43:40,098 | INFO     | monitor loop #760: job 0:6963160859 is in state 'finished'
[2026-01-10 00:44:14] 2026-01-09 23:43:40,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:44:14] 2026-01-09 23:43:40,421 | INFO     | time since job start (10384s) is within the limit (349056.0s)
[2026-01-10 00:44:14] 2026-01-09 23:43:40,972 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 00:44:14] 2026-01-09 23:43:40,978 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.506625
[2026-01-10 00:44:14] 2026-01-09 23:43:40,983 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963160859/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:44:14] 2026-01-09 23:43:40,984 | INFO     | extracted standard info from prmon json
[2026-01-10 00:44:14] 2026-01-09 23:43:40,985 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:44:14] 2026-01-09 23:43:40,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:44:14] 2026-01-09 23:43:40,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:44:14] 2026-01-09 23:43:40,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:44:14] 2026-01-09 23:43:40,991 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:44:14] 2026-01-09 23:43:40,991 | INFO     | sum of square deviations: 1496660620.0
[2026-01-10 00:44:14] 2026-01-09 23:43:40,993 | INFO     | sum of deviations: 16663877458.999998
[2026-01-10 00:44:14] 2026-01-09 23:43:40,993 | INFO     | mean x: 1767997028.0
[2026-01-10 00:44:14] 2026-01-09 23:43:40,993 | INFO     | mean y: 2728482.917159763
[2026-01-10 00:44:14] 2026-01-09 23:43:40,993 | INFO     | intersect: -19682219078.854183
[2026-01-10 00:44:14] 2026-01-09 23:43:40,994 | INFO     | chi2: 1.8865783014153088
[2026-01-10 00:44:14] 2026-01-09 23:43:40,994 | INFO     | sum of square deviations: 1367709365.0
[2026-01-10 00:44:14] 2026-01-09 23:43:40,995 | INFO     | sum of deviations: 16352734423.500002
[2026-01-10 00:44:14] 2026-01-09 23:43:40,996 | INFO     | mean x: 1767996875.5
[2026-01-10 00:44:14] 2026-01-09 23:43:40,996 | INFO     | mean y: 2728114.8475609757
[2026-01-10 00:44:14] 2026-01-09 23:43:40,996 | INFO     | intersect: -21135961219.65831
[2026-01-10 00:44:14] 2026-01-09 23:43:40,996 | INFO     | chi2: 1.888678616677498
[2026-01-10 00:44:14] 2026-01-09 23:43:40,997 | INFO     | current chi2=1.888678616677498 (change=-0.11132934480448439 %)
[2026-01-10 00:44:14] 2026-01-09 23:43:40,997 | INFO     | right removable region: 163
[2026-01-10 00:44:14] 2026-01-09 23:43:40,997 | INFO     | sum of square deviations: 1367709365.0
[2026-01-10 00:44:14] 2026-01-09 23:43:40,998 | INFO     | sum of deviations: -15695753779.000002
[2026-01-10 00:44:14] 2026-01-09 23:43:40,999 | INFO     | mean x: 1767997180.5
[2026-01-10 00:44:14] 2026-01-09 23:43:40,999 | INFO     | mean y: 2766320.2560975607
[2026-01-10 00:44:14] 2026-01-09 23:43:40,999 | INFO     | intersect: 20292199980.085003
[2026-01-10 00:44:14] 2026-01-09 23:43:40,999 | INFO     | chi2: 0.18560833621761566
[2026-01-10 00:44:14] 2026-01-09 23:43:41,000 | INFO     | current chi2=0.18560833621761566 (change=90.1616415243209 %)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,000 | INFO     | sum of square deviations: 1246386160.0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,001 | INFO     | sum of deviations: -18261799848.0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,001 | INFO     | mean x: 1767997333.0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,002 | INFO     | mean y: 2769500.8427672954
[2026-01-10 00:44:14] 2026-01-09 23:43:41,002 | INFO     | intersect: 25907111560.484863
[2026-01-10 00:44:14] 2026-01-09 23:43:41,002 | INFO     | chi2: 0.15761869636051676
[2026-01-10 00:44:14] 2026-01-09 23:43:41,002 | INFO     | current chi2=0.15761869636051676 (change=15.079947607677802 %)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,003 | INFO     | left removable region: 20
[2026-01-10 00:44:14] 2026-01-09 23:43:41,003 | INFO     | sum of square deviations: 906703512.0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,004 | INFO     | sum of deviations: -2838349764.0000005
[2026-01-10 00:44:14] 2026-01-09 23:43:41,004 | INFO     | mean x: 1767997455.0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,004 | INFO     | mean y: 2748712.769230769
[2026-01-10 00:44:14] 2026-01-09 23:43:41,005 | INFO     | intersect: 5537297871.052243
[2026-01-10 00:44:14] 2026-01-09 23:43:41,005 | INFO     | chi2: 0.05926901802715751
[2026-01-10 00:44:14] 2026-01-09 23:43:41,005 | INFO     | current memory leak: -3.13 B/s (using 143 data points, chi2=0.06)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,006 | INFO     | could have reported an average CPU frequency of 2801 MHz (9 samples)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,006 | INFO     | ..............................
[2026-01-10 00:44:14] 2026-01-09 23:43:41,006 | INFO     | . Timing measurements:
[2026-01-10 00:44:14] 2026-01-09 23:43:41,006 | INFO     | . get job = 0 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,006 | INFO     | . initial setup = 2 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | . payload setup = 23 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | . stage-in = 0 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | . payload execution = 10310 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | . stage-out = 1 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | . log creation = 0 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,007 | INFO     | ..............................
[2026-01-10 00:44:14] 2026-01-09 23:43:41,078 | INFO     | 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,078 | INFO     | job summary report
[2026-01-10 00:44:14] 2026-01-09 23:43:41,078 | INFO     | --------------------------------------------------
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | PanDA job id: 6963160859
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | task id: 47898826
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | errors: (none)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | pilot state: finished 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,079 | INFO     | transexitcode: 0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | exeerrorcode: 0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | exeerrordiag: 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | exitcode: 0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | exitmsg: OK
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | cpuconsumptiontime: 112460 s
[2026-01-10 00:44:14] 2026-01-09 23:43:41,080 | INFO     | nevents: 400
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | neventsw: 0
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | pid: 2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | pgrp: 2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | corecount: 12
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | event service: False
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | sizes: {0: 2283858, 1: 2284000, 12: 2284290, 23: 2284290, 10338: 2312893, 10341: 2321893, 10343: 2322077, 10350: 2322335}
[2026-01-10 00:44:14] 2026-01-09 23:43:41,081 | INFO     | --------------------------------------------------
[2026-01-10 00:44:14] 2026-01-09 23:43:41,082 | INFO     | 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,082 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-10 00:44:14] 2026-01-09 23:43:41,098 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,099 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,099 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,099 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,101 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:44:14] 2026-01-09 23:43:41,102 | INFO     | job 6963160859 has completed (purged errors)
[2026-01-10 00:44:14] 2026-01-09 23:43:41,102 | INFO     | overall cleanup function is called
[2026-01-10 00:44:14] 2026-01-09 23:43:41,661 | INFO     | PID=2922456 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 00:44:14] 2026-01-09 23:43:41,661 | INFO     | .. there are 2 such processes running
[2026-01-10 00:44:14] 2026-01-09 23:43:42,110 | INFO     | --- collectZombieJob: --- 10, [2929879]
[2026-01-10 00:44:14] 2026-01-09 23:43:42,110 | INFO     | zombie collector waiting for pid 2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:42,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:44:14] 2026-01-09 23:43:42,111 | INFO     | collected zombie processes
[2026-01-10 00:44:14] 2026-01-09 23:43:42,111 | INFO     | will attempt to kill all subprocesses of pid=2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:42,305 | INFO     | process IDs to be killed: [2929879] (in reverse order)
[2026-01-10 00:44:14] 2026-01-09 23:43:42,367 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:44:14] 2026-01-09 23:43:42,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:44:14] 2026-01-09 23:43:42,374 | INFO     | did not find any defunct processes belonging to 2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:42,380 | INFO     | did not find any defunct processes belonging to 2929879
[2026-01-10 00:44:14] 2026-01-09 23:43:42,381 | INFO     | ready for new job
[2026-01-10 00:44:14] 2026-01-09 23:43:42,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:44:14] 2026-01-09 23:43:42,383 | INFO     | ***************************************
[2026-01-10 00:44:14] 2026-01-09 23:43:42,383 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:44:14] 2026-01-09 23:43:42,383 | INFO     | ***************************************
[2026-01-10 00:44:14] 2026-01-09 23:43:42,383 | INFO     | 
[2026-01-10 00:44:14] 2026-01-09 23:43:42,385 | INFO     | architecture information:
[2026-01-10 00:44:14] 2026-01-09 23:43:42,385 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:44:14] 2026-01-09 23:43:42,399 | INFO     | cat /etc/os-release:
[2026-01-10 00:44:14] NAME="CentOS Linux"
[2026-01-10 00:44:14] VERSION="7 (Core)"
[2026-01-10 00:44:14] ID="centos"
[2026-01-10 00:44:14] ID_LIKE="rhel fedora"
[2026-01-10 00:44:14] VERSION_ID="7"
[2026-01-10 00:44:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:44:14] ANSI_COLOR="0;31"
[2026-01-10 00:44:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:44:14] HOME_URL="https://www.centos.org/"
[2026-01-10 00:44:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:44:14] 
[2026-01-10 00:44:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:44:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:44:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:44:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:44:14] 
[2026-01-10 00:44:14] 2026-01-09 23:43:42,399 | INFO     | ***************************************
[2026-01-10 00:44:14] 2026-01-09 23:43:42,902 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-10 00:44:14] 2026-01-09 23:43:42,920 | INFO     | sufficient remaining disk space (1811049086976 B)
[2026-01-10 00:44:14] 2026-01-09 23:43:42,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:44:14] 2026-01-09 23:43:42,921 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:44:14] 2026-01-09 23:43:42,921 | INFO     | update_server=False
[2026-01-10 00:44:14] 2026-01-09 23:43:42,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:44:14] 2026-01-09 23:43:42,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:44:14] 2026-01-09 23:43:42,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:44:14] 2026-01-09 23:43:42,929 | INFO     | all payload control threads have been joined
[2026-01-10 00:44:14] 2026-01-09 23:43:43,099 | INFO     | all data control threads have been joined
[2026-01-10 00:44:14] 2026-01-09 23:43:43,547 | INFO     | all job control threads have been joined
[2026-01-10 00:44:14] 2026-01-09 23:43:43,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:44:14] 2026-01-09 23:43:43,606 | INFO     | aborting loop
[2026-01-10 00:44:14] 2026-01-09 23:43:43,927 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:43,927 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:43,932 | INFO     | [payload] control thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,069 | INFO     | [job] validate thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,105 | INFO     | [data] control thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:44:14] 2026-01-09 23:43:44,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,553 | INFO     | [job] control thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,611 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,879 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,917 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:44,927 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:45,354 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:45,377 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:45,386 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:45,428 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:48,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:44:14] 2026-01-09 23:43:53,222 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:44:14] 2026-01-09 23:43:53,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713461884736)>', '<ExcThread(monitor, started 140712767112960)>']
[2026-01-10 00:44:14] 2026-01-09 23:43:58,872 | INFO     | all workflow threads have been joined
[2026-01-10 00:44:14] 2026-01-09 23:43:58,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:44:14] 2026-01-09 23:43:58,873 | INFO     | traces error code: 0
[2026-01-10 00:44:14] 2026-01-09 23:43:58,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:44:14] 2026-01-09 23:44:13,976 | INFO     | PID=2922456 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:44:14] 2026-01-09 23:44:13,977 | INFO     | .. there are 2 such processes running
[2026-01-10 00:44:14] 2026-01-09 23:44:13,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:44:14] 2026-01-09 23:44:13,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:44:14] 2026-01-09 23:44:13,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:44:14] 2026-01-09 23:44:13,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:44:14] 2026-01-09 23:44:13,978 | INFO     | [monitor] control thread has ended
[2026-01-10 00:44:14] 2026-01-09 23:44:14,215 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:44:14] 2026-01-09 23:44:14,218 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:44:14] 2026-01-09 23:44:14,220 [wrapper] pilotpid: 2922456
[2026-01-10 00:44:14] 2026-01-09 23:44:14,223 [wrapper] Pilot exit status: 0
[2026-01-10 00:44:14] 2026-01-09 23:44:14,286 [wrapper] pandaids: 6963160859
[2026-01-10 00:44:14] 2026-01-09 23:44:14,322 [wrapper] cleanup supervisor_pilot 2999979 2922457
[2026-01-10 00:44:14] 2026-01-09 23:44:14,325 [wrapper] Test setup, not cleaning
[2026-01-10 00:44:14] 2026-01-09 23:44:14,327 [wrapper] apfmon messages muted
[2026-01-10 00:44:14] 2026-01-09 23:44:14,330 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:44:14] 2026-01-09 23:44:14,333 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:44:14]  *** Error codes and diagnostics ***
[2026-01-10 00:44:14]     "exeErrorCode": 0,
[2026-01-10 00:44:14]     "exeErrorDiag": "",
[2026-01-10 00:44:14]     "pilotErrorCode": 0,
[2026-01-10 00:44:14]     "pilotErrorDiag": "",
[2026-01-10 00:44:14]  *** Listing of results directory ***
[2026-01-10 00:44:14] total 437968
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 00:44:14] -rwx------ 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc       100 Jan  9 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:44:14] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 21:50 run_atlas
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc       105 Jan  9 21:50 job.xml
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc 223013485 Jan  9 21:50 EVNT.47898824._001263.pool.root.1
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc      6295 Jan  9 21:50 init_data.xml
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc    592401 Jan  9 21:50 input.tar.gz
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc     15847 Jan  9 21:50 start_atlas.sh
[2026-01-10 00:44:14] drwxrwx--x 2 boinc boinc        68 Jan  9 21:50 shared
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc         0 Jan  9 21:50 boinc_lockfile
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc      2520 Jan  9 21:50 pandaJob.out
[2026-01-10 00:44:14] -rw------- 1 boinc boinc    989381 Jan  9 21:50 agis_schedconf.cvmfs.json
[2026-01-10 00:44:14] -rw------- 1 boinc boinc   1516240 Jan  9 21:50 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:44:14] drwx------ 5 boinc boinc      4096 Jan  9 21:50 pilot3
[2026-01-10 00:44:14] -rw------- 1 boinc boinc 217737075 Jan 10 00:42 HITS.47898826._032682.pool.root.1
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc       532 Jan 10 00:42 boinc_task_state.xml
[2026-01-10 00:44:14] -rw------- 1 boinc boinc        95 Jan 10 00:43 pilot_heartbeat.json
[2026-01-10 00:44:14] -rw------- 1 boinc boinc      1034 Jan 10 00:43 memory_monitor_summary.json
[2026-01-10 00:44:14] -rw------- 1 boinc boinc    465612 Jan 10 00:43 log.47898826._032682.job.log.tgz.1
[2026-01-10 00:44:14] -rw------- 1 boinc boinc      7827 Jan 10 00:43 heartbeat.json
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc      8192 Jan 10 00:43 boinc_mmap_file
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc        29 Jan 10 00:43 wrapper_checkpoint.txt
[2026-01-10 00:44:14] -rw------- 1 boinc boinc       822 Jan 10 00:44 pilotlog.txt
[2026-01-10 00:44:14] -rw------- 1 boinc boinc   1448371 Jan 10 00:44 log.47898826._032682.job.log.1
[2026-01-10 00:44:14] -rw------- 1 boinc boinc       357 Jan 10 00:44 output.list
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc       620 Jan 10 00:44 runtime_log
[2026-01-10 00:44:14] -rw------- 1 boinc boinc   1935360 Jan 10 00:44 result.tar.gz
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc      8858 Jan 10 00:44 runtime_log.err
[2026-01-10 00:44:14] -rw------- 1 boinc boinc       667 Jan 10 00:44 MOfNDmq0Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6RlKDmtEfntn.diag
[2026-01-10 00:44:14] -rw-r--r-- 1 boinc boinc     21517 Jan 10 00:44 stderr.txt
[2026-01-10 00:44:14] HITS file was successfully produced:
[2026-01-10 00:44:14] -rw------- 1 boinc boinc 217737075 Jan 10 00:42 shared/HITS.pool.root.1
[2026-01-10 00:44:14]  *** Contents of shared directory: ***
[2026-01-10 00:44:14] total 432916
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc 223013485 Jan  9 21:50 ATLAS.root_0
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc    592401 Jan  9 21:50 input.tar.gz
[2026-01-10 00:44:14] -rw-r--r-- 2 boinc boinc     15847 Jan  9 21:50 start_atlas.sh
[2026-01-10 00:44:14] -rw------- 1 boinc boinc 217737075 Jan 10 00:42 HITS.pool.root.1
[2026-01-10 00:44:14] -rw------- 1 boinc boinc   1935360 Jan 10 00:44 result.tar.gz
00:44:15 (2918328): run_atlas exited; CPU time 112694.731298
00:44:15 (2918328): called boinc_finish(0)

</stderr_txt>
]]>

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