Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:46:15 (4063730): wrapper (7.7.26015): starting
15:46:15 (4063730): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:46:15] Arguments: --nthreads 8
[2026-01-09 15:46:15] Threads: 8
[2026-01-09 15:46:15] Checking for CVMFS
[2026-01-09 15:46:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:46:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:46:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:46:15] 2.10.1.0 4440 315729 158068 154956 3 97 14635272 18432000 3691 130560 2 333375083 99.988 12488111 7085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-09 15:46:15] CVMFS is ok
[2026-01-09 15:46:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:46:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:46:15] Further information can be found at the LHC@home message board.
[2026-01-09 15:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:46:15] Checking for apptainer binary...
[2026-01-09 15:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:46:15] Running /usr/bin/apptainer --version
[2026-01-09 15:46:15] apptainer version 1.1.9-1.el8
[2026-01-09 15:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:46:16] c-16-31.aglt2.org
[2026-01-09 15:46:16] apptainer works
[2026-01-09 15:46:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:46:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:46:16] Starting ATLAS job with PandaID=6963192104
[2026-01-09 15:46:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:50:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:50:18] 2026-01-10 00:49:41,220 | INFO     | executing command: lscpu
[2026-01-09 19:50:18] 2026-01-10 00:49:41,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:50:18] 2026-01-10 00:49:42,247 | INFO     | time since job start (14594s) is within the limit (349056.0s)
[2026-01-09 19:50:18] 2026-01-10 00:49:42,576 | INFO     | monitor loop #1060: job 0:6963192104 is in state 'finished'
[2026-01-09 19:50:18] 2026-01-10 00:49:42,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:18] 2026-01-10 00:49:44,252 | INFO     | time since job start (14596s) is within the limit (349056.0s)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,079 | INFO     | monitor loop #1061: job 0:6963192104 is in state 'finished'
[2026-01-09 19:50:18] 2026-01-10 00:49:45,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,326 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 19:50:18] 2026-01-10 00:49:45,349 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2959.8618500000002
[2026-01-09 19:50:18] 2026-01-10 00:49:45,358 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963192104/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,358 | INFO     | extracted standard info from prmon json
[2026-01-09 19:50:18] 2026-01-10 00:49:45,359 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:50:18] 2026-01-10 00:49:45,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:50:18] 2026-01-10 00:49:45,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:50:18] 2026-01-10 00:49:45,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:50:18] 2026-01-10 00:49:45,367 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:50:18] 2026-01-10 00:49:45,367 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,370 | INFO     | sum of deviations: 5899747553.000005
[2026-01-09 19:50:18] 2026-01-10 00:49:45,370 | INFO     | mean x: 1767998875.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,370 | INFO     | mean y: 2532898.079497908
[2026-01-09 19:50:18] 2026-01-10 00:49:45,370 | INFO     | intersect: -2461524893.361923
[2026-01-09 19:50:18] 2026-01-10 00:49:45,371 | INFO     | chi2: 1.6793530377460448
[2026-01-09 19:50:18] 2026-01-10 00:49:45,371 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 19:50:18] 2026-01-10 00:49:45,373 | INFO     | sum of deviations: 5689491624.500007
[2026-01-09 19:50:18] 2026-01-10 00:49:45,373 | INFO     | mean x: 1767998722.5
[2026-01-09 19:50:18] 2026-01-10 00:49:45,374 | INFO     | mean y: 2532774.816239316
[2026-01-09 19:50:18] 2026-01-10 00:49:45,374 | INFO     | intersect: -2529313566.3156734
[2026-01-09 19:50:18] 2026-01-10 00:49:45,374 | INFO     | chi2: 1.6795663957728413
[2026-01-09 19:50:18] 2026-01-10 00:49:45,375 | INFO     | current chi2=1.6795663957728413 (change=-0.012704775112850047 %)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,375 | INFO     | right removable region: 233
[2026-01-09 19:50:18] 2026-01-10 00:49:45,375 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 19:50:18] 2026-01-10 00:49:45,377 | INFO     | sum of deviations: -29394837014.000008
[2026-01-09 19:50:18] 2026-01-10 00:49:45,377 | INFO     | mean x: 1767999027.5
[2026-01-09 19:50:18] 2026-01-10 00:49:45,378 | INFO     | mean y: 2553381.205128205
[2026-01-09 19:50:18] 2026-01-10 00:49:45,378 | INFO     | intersect: 13083374708.094793
[2026-01-09 19:50:18] 2026-01-10 00:49:45,378 | INFO     | chi2: 0.2761489852949945
[2026-01-09 19:50:18] 2026-01-10 00:49:45,379 | INFO     | current chi2=0.2761489852949945 (change=83.55622795873643 %)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,379 | INFO     | sum of square deviations: 3723716330.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,381 | INFO     | sum of deviations: -28830777944.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,381 | INFO     | mean x: 1767999180.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,381 | INFO     | mean y: 2553035.7816593884
[2026-01-09 19:50:18] 2026-01-10 00:49:45,382 | INFO     | intersect: 13691241229.641499
[2026-01-09 19:50:18] 2026-01-10 00:49:45,382 | INFO     | chi2: 0.2746469950583359
[2026-01-09 19:50:18] 2026-01-10 00:49:45,382 | INFO     | current chi2=0.2746469950583359 (change=0.5439057598035706 %)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,382 | INFO     | left removable region: 20
[2026-01-09 19:50:18] 2026-01-10 00:49:45,383 | INFO     | sum of square deviations: 2996454322.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,385 | INFO     | sum of deviations: -13387985553.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,385 | INFO     | mean x: 1767999302.0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,385 | INFO     | mean y: 2543042.107981221
[2026-01-09 19:50:18] 2026-01-10 00:49:45,385 | INFO     | intersect: 7901862227.154475
[2026-01-09 19:50:18] 2026-01-10 00:49:45,386 | INFO     | chi2: 0.20066664866431977
[2026-01-09 19:50:18] 2026-01-10 00:49:45,386 | INFO     | current memory leak: -4.47 B/s (using 213 data points, chi2=0.20)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,386 | INFO     | could have reported an average CPU frequency of 2937 MHz (12 samples)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | ..............................
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | . Timing measurements:
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | . get job = 0 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | . initial setup = 2 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | . payload setup = 6 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,387 | INFO     | . stage-in = 0 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,388 | INFO     | . payload execution = 14557 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,388 | INFO     | . stage-out = 2 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,388 | INFO     | . log creation = 0 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,388 | INFO     | ..............................
[2026-01-09 19:50:18] 2026-01-10 00:49:45,537 | INFO     | 
[2026-01-09 19:50:18] 2026-01-10 00:49:45,537 | INFO     | job summary report
[2026-01-09 19:50:18] 2026-01-10 00:49:45,537 | INFO     | --------------------------------------------------
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | PanDA job id: 6963192104
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | task id: 47898826
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | errors: (none)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | pilot state: finished 
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | transexitcode: 0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | exeerrorcode: 0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | exeerrordiag: 
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | exitcode: 0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | exitmsg: OK
[2026-01-09 19:50:18] 2026-01-10 00:49:45,538 | INFO     | cpuconsumptiontime: 106101 s
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | nevents: 400
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | neventsw: 0
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | pid: 4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | pgrp: 4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | corecount: 8
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | event service: False
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 12: 2284317, 14567: 2315060, 14570: 2324058, 14573: 2324242, 14580: 2324436}
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | --------------------------------------------------
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | 
[2026-01-09 19:50:18] 2026-01-10 00:49:45,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 19:50:18] 2026-01-10 00:49:45,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:50:18] 2026-01-10 00:49:45,561 | INFO     | job 6963192104 has completed (purged errors)
[2026-01-09 19:50:18] 2026-01-10 00:49:45,561 | INFO     | overall cleanup function is called
[2026-01-09 19:50:18] 2026-01-10 00:49:46,570 | INFO     | --- collectZombieJob: --- 10, [4073721]
[2026-01-09 19:50:18] 2026-01-10 00:49:46,570 | INFO     | zombie collector waiting for pid 4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:46,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:50:18] 2026-01-10 00:49:46,571 | INFO     | collected zombie processes
[2026-01-09 19:50:18] 2026-01-10 00:49:46,571 | INFO     | will attempt to kill all subprocesses of pid=4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:46,888 | INFO     | process IDs to be killed: [4073721] (in reverse order)
[2026-01-09 19:50:18] 2026-01-10 00:49:46,995 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:50:18] 2026-01-10 00:49:46,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:50:18] 2026-01-10 00:49:47,017 | INFO     | did not find any defunct processes belonging to 4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:47,035 | INFO     | did not find any defunct processes belonging to 4073721
[2026-01-09 19:50:18] 2026-01-10 00:49:47,035 | INFO     | ready for new job
[2026-01-09 19:50:18] 2026-01-10 00:49:47,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:50:18] 2026-01-10 00:49:47,038 | INFO     | ***************************************
[2026-01-09 19:50:18] 2026-01-10 00:49:47,038 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:50:18] 2026-01-10 00:49:47,038 | INFO     | ***************************************
[2026-01-09 19:50:18] 2026-01-10 00:49:47,039 | INFO     | 
[2026-01-09 19:50:18] 2026-01-10 00:49:47,054 | INFO     | architecture information:
[2026-01-09 19:50:18] 2026-01-10 00:49:47,054 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:50:18] 2026-01-10 00:49:47,069 | INFO     | cat /etc/os-release:
[2026-01-09 19:50:18] NAME="CentOS Linux"
[2026-01-09 19:50:18] VERSION="7 (Core)"
[2026-01-09 19:50:18] ID="centos"
[2026-01-09 19:50:18] ID_LIKE="rhel fedora"
[2026-01-09 19:50:18] VERSION_ID="7"
[2026-01-09 19:50:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:50:18] ANSI_COLOR="0;31"
[2026-01-09 19:50:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:50:18] HOME_URL="https://www.centos.org/"
[2026-01-09 19:50:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:50:18] 
[2026-01-09 19:50:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:50:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:50:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:50:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:50:18] 
[2026-01-09 19:50:18] 2026-01-10 00:49:47,069 | INFO     | ***************************************
[2026-01-09 19:50:18] 2026-01-10 00:49:47,572 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 19:50:18] 2026-01-10 00:49:47,587 | INFO     | sufficient remaining disk space (102361989120 B)
[2026-01-09 19:50:18] 2026-01-10 00:49:47,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:50:18] 2026-01-10 00:49:47,588 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:50:18] 2026-01-10 00:49:47,588 | INFO     | update_server=False
[2026-01-09 19:50:18] 2026-01-10 00:49:47,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:50:18] 2026-01-10 00:49:47,756 | INFO     | all payload control threads have been joined
[2026-01-09 19:50:18] 2026-01-10 00:49:47,972 | INFO     | all data control threads have been joined
[2026-01-09 19:50:18] 2026-01-10 00:49:48,391 | INFO     | all job control threads have been joined
[2026-01-09 19:50:18] 2026-01-10 00:49:48,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:50:18] 2026-01-10 00:49:48,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:18] 2026-01-10 00:49:48,587 | INFO     | aborting loop
[2026-01-09 19:50:18] 2026-01-10 00:49:48,589 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:48,628 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:48,761 | INFO     | [payload] control thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:48,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:50:18] 2026-01-10 00:49:48,975 | INFO     | [data] control thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,270 | INFO     | [job] validate thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,270 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,374 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,395 | INFO     | [job] control thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,462 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,591 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,626 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:49,877 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:50,442 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:50,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:18] 2026-01-10 00:49:51,549 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:52,364 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:50:18] 2026-01-10 00:49:52,862 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:57,914 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:50:18] 2026-01-10 00:49:58,920 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:50:18] 2026-01-10 00:49:59,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993412568896)>', '<ExcThread(monitor, started 139992840005376)>']
[2026-01-09 19:50:18] 2026-01-10 00:50:04,630 | INFO     | all workflow threads have been joined
[2026-01-09 19:50:18] 2026-01-10 00:50:04,630 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:50:18] 2026-01-10 00:50:04,630 | INFO     | traces error code: 0
[2026-01-09 19:50:18] 2026-01-10 00:50:04,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:50:18] 2026-01-10 00:50:17,741 | INFO     | PID=4067377 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:50:18] 2026-01-10 00:50:17,741 | INFO     | .. there are 5 such processes running
[2026-01-09 19:50:18] 2026-01-10 00:50:17,743 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:50:18] 2026-01-10 00:50:17,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:50:18] 2026-01-10 00:50:17,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:50:18] 2026-01-10 00:50:17,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:50:18] 2026-01-10 00:50:17,743 | INFO     | [monitor] control thread has ended
[2026-01-09 19:50:18] 2026-01-10 00:50:17,847 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:50:18] 2026-01-10 00:50:17,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:50:18] 2026-01-10 00:50:17,852 [wrapper] pilotpid: 4067377
[2026-01-09 19:50:18] 2026-01-10 00:50:17,855 [wrapper] Pilot exit status: 0
[2026-01-09 19:50:18] 2026-01-10 00:50:17,864 [wrapper] pandaids: 6963192104
[2026-01-09 19:50:18] 2026-01-10 00:50:17,929 [wrapper] cleanup supervisor_pilot 3799368 4067378
[2026-01-09 19:50:18] 2026-01-10 00:50:17,932 [wrapper] Test setup, not cleaning
[2026-01-09 19:50:18] 2026-01-10 00:50:17,934 [wrapper] apfmon messages muted
[2026-01-09 19:50:18] 2026-01-10 00:50:17,937 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:50:18] 2026-01-10 00:50:17,939 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:50:18]  *** Error codes and diagnostics ***
[2026-01-09 19:50:18]     "exeErrorCode": 0,
[2026-01-09 19:50:18]     "exeErrorDiag": "",
[2026-01-09 19:50:18]     "pilotErrorCode": 0,
[2026-01-09 19:50:18]     "pilotErrorDiag": "",
[2026-01-09 19:50:18]  *** Listing of results directory ***
[2026-01-09 19:50:18] total 438500
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:50:18] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas       100 Jan  9 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:50:18] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 15:46 run_atlas
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas       105 Jan  9 15:46 job.xml
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas 224710881 Jan  9 15:46 EVNT.47898824._001497.pool.root.1
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 15:46 start_atlas.sh
[2026-01-09 19:50:18] drwxrwx--x 2 boincer umatlas      4096 Jan  9 15:46 shared
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 15:46 input.tar.gz
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas         0 Jan  9 15:46 boinc_lockfile
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 15:46 pandaJob.out
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas        57 Jan  9 15:46 setup.sh.local
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas    989381 Jan  9 15:46 agis_schedconf.cvmfs.json
[2026-01-09 19:50:18] drwx------ 5 boincer umatlas      4096 Jan  9 15:46 pilot3
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas      6014 Jan  9 19:45 init_data.xml
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas 215330870 Jan  9 19:48 HITS.47898826._038972.pool.root.1
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas       531 Jan  9 19:49 boinc_task_state.xml
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas      1050 Jan  9 19:49 memory_monitor_summary.json
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas   1516240 Jan  9 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas    488453 Jan  9 19:49 log.47898826._038972.job.log.tgz.1
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas      7837 Jan  9 19:49 heartbeat.json
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas        29 Jan  9 19:50 wrapper_checkpoint.txt
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 19:50 boinc_mmap_file
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas        95 Jan  9 19:50 pilot_heartbeat.json
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas       822 Jan  9 19:50 pilotlog.txt
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas   2045360 Jan  9 19:50 log.47898826._038972.job.log.1
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas       357 Jan  9 19:50 output.list
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas       620 Jan  9 19:50 runtime_log
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas   2549760 Jan  9 19:50 result.tar.gz
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 19:50 runtime_log.err
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas       662 Jan  9 19:50 8CLKDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8MmKDmbsWDQo.diag
[2026-01-09 19:50:18] -rw-r--r-- 1 boincer umatlas     21374 Jan  9 19:50 stderr.txt
[2026-01-09 19:50:18] HITS file was successfully produced:
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas 215330870 Jan  9 19:48 shared/HITS.pool.root.1
[2026-01-09 19:50:18]  *** Contents of shared directory: ***
[2026-01-09 19:50:18] total 432828
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas 224710881 Jan  9 15:46 ATLAS.root_0
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 15:46 start_atlas.sh
[2026-01-09 19:50:18] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 15:46 input.tar.gz
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas 215330870 Jan  9 19:48 HITS.pool.root.1
[2026-01-09 19:50:18] -rw------- 1 boincer umatlas   2549760 Jan  9 19:50 result.tar.gz
19:50:19 (4063730): run_atlas exited; CPU time 106549.503311
19:50:19 (4063730): called boinc_finish(0)

</stderr_txt>
]]>

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