Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:29:40 (2785260): wrapper (7.7.26015): starting
16:29:40 (2785260): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:29:40] Arguments: --nthreads 8
[2026-01-09 16:29:40] Threads: 8
[2026-01-09 16:29:40] Checking for CVMFS
[2026-01-09 16:29:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:29:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:29:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:29:41] 2.13.3.0 11771 93906 229668 154957 3 332 27087613 32935936 29053 16776704 0 563322306 99.506 735026102 37725 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:29:41] CVMFS is ok
[2026-01-09 16:29:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:29:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:29:41] Further information can be found at the LHC@home message board.
[2026-01-09 16:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:29:41] Checking for apptainer binary...
[2026-01-09 16:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:29:41] Running /usr/bin/apptainer --version
[2026-01-09 16:29:41] apptainer version 1.4.5-2.el9
[2026-01-09 16:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:29:41] c7-2-14.aglt2.org
[2026-01-09 16:29:41] apptainer works
[2026-01-09 16:29:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:29:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:29:41] Starting ATLAS job with PandaID=6963188189
[2026-01-09 16:29:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:41:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:41:31] 2026-01-10 00:40:46,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:41:31] 2026-01-10 00:40:46,827 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:41:31] 2026-01-10 00:40:46,827 | INFO     | sum of square deviations: 2027640732.994655
[2026-01-09 19:41:31] 2026-01-10 00:40:46,828 | INFO     | sum of deviations: 37434562123.47592
[2026-01-09 19:41:31] 2026-01-10 00:40:46,828 | INFO     | mean x: 1767999924.0053475
[2026-01-09 19:41:31] 2026-01-10 00:40:46,828 | INFO     | mean y: 2441313.524064171
[2026-01-09 19:41:31] 2026-01-10 00:40:46,828 | INFO     | intersect: -32638599040.666412
[2026-01-09 19:41:31] 2026-01-10 00:40:46,829 | INFO     | chi2: 6.0901125235220475
[2026-01-09 19:41:31] 2026-01-10 00:40:46,829 | INFO     | sum of square deviations: 1869303185.4945054
[2026-01-09 19:41:31] 2026-01-10 00:40:46,830 | INFO     | sum of deviations: 61449717982.714294
[2026-01-09 19:41:31] 2026-01-10 00:40:46,830 | INFO     | mean x: 1767999771.5054946
[2026-01-09 19:41:31] 2026-01-10 00:40:46,830 | INFO     | mean y: 2464056.785714286
[2026-01-09 19:41:31] 2026-01-10 00:40:46,830 | INFO     | intersect: -58117100600.01742
[2026-01-09 19:41:31] 2026-01-10 00:40:46,830 | INFO     | chi2: 4.565046369025899
[2026-01-09 19:41:31] 2026-01-10 00:40:46,834 | INFO     | current chi2=4.565046369025899 (change=25.04167449461457 %)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,835 | INFO     | sum of square deviations: 1719430912.9943547
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | sum of deviations: 60352037123.41806
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | mean x: 1767999619.0056498
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | mean y: 2462939.581920904
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | intersect: -62054336105.980125
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | chi2: 4.569598436611186
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | current chi2=4.569598436611186 (change=-0.09971569218164077 %)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,836 | INFO     | right removable region: 176
[2026-01-09 19:41:31] 2026-01-10 00:40:46,837 | INFO     | sum of square deviations: 1869302575.4945054
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | sum of deviations: -12790937482.450527
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | mean x: 1768000076.5054946
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | mean y: 2489564.4505494507
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | intersect: 12100251983.446375
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | chi2: 3.11149166731592
[2026-01-09 19:41:31] 2026-01-10 00:40:46,838 | INFO     | current chi2=3.11149166731592 (change=48.90912679694669 %)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,843 | INFO     | sum of square deviations: 1719429692.9943547
[2026-01-09 19:41:31] 2026-01-10 00:40:46,843 | INFO     | sum of deviations: -39781528154.508484
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | mean x: 1768000229.0056498
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | mean y: 2516864.5084745763
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | intersect: 40907795617.0702
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | chi2: 2.139264850653789
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | current chi2=2.139264850653789 (change=31.246325576722732 %)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,844 | INFO     | sum of square deviations: 1577789522.9941938
[2026-01-09 19:41:31] 2026-01-10 00:40:46,845 | INFO     | sum of deviations: -49283175848.24419
[2026-01-09 19:41:31] 2026-01-10 00:40:46,845 | INFO     | mean x: 1768000381.5058138
[2026-01-09 19:41:31] 2026-01-10 00:40:46,845 | INFO     | mean y: 2527069.2441860465
[2026-01-09 19:41:31] 2026-01-10 00:40:46,846 | INFO     | intersect: 55227050005.7135
[2026-01-09 19:41:31] 2026-01-10 00:40:46,846 | INFO     | chi2: 1.9801479465322487
[2026-01-09 19:41:31] 2026-01-10 00:40:46,846 | INFO     | current chi2=1.9801479465322487 (change=7.437924484801964 %)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,846 | INFO     | left removable region: 30
[2026-01-09 19:41:31] 2026-01-10 00:40:46,846 | INFO     | sum of square deviations: 964975928.4931524
[2026-01-09 19:41:31] 2026-01-10 00:40:46,851 | INFO     | sum of deviations: -20919088520.0548
[2026-01-09 19:41:31] 2026-01-10 00:40:46,851 | INFO     | mean x: 1768000503.5068493
[2026-01-09 19:41:31] 2026-01-10 00:40:46,851 | INFO     | mean y: 2551794.5547945206
[2026-01-09 19:41:31] 2026-01-10 00:40:46,851 | INFO     | intersect: 38329890274.50495
[2026-01-09 19:41:31] 2026-01-10 00:40:46,851 | INFO     | chi2: 0.2462488952083066
[2026-01-09 19:41:31] 2026-01-10 00:40:46,852 | INFO     | current memory leak: -21.68 B/s (using 146 data points, chi2=0.25)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,852 | INFO     | could have reported an average CPU frequency of 3219 MHz (10 samples)
[2026-01-09 19:41:31] 2026-01-10 00:40:46,852 | INFO     | ..............................
[2026-01-09 19:41:31] 2026-01-10 00:40:46,852 | INFO     | . Timing measurements:
[2026-01-09 19:41:31] 2026-01-10 00:40:46,852 | INFO     | . get job = 0 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,856 | INFO     | . initial setup = 3 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | . payload setup = 14 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | . stage-in = 0 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | . payload execution = 11384 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | . stage-out = 3 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | . log creation = 0 s
[2026-01-09 19:41:31] 2026-01-10 00:40:46,857 | INFO     | ..............................
[2026-01-09 19:41:31] 2026-01-10 00:40:47,060 | INFO     | 
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | job summary report
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | --------------------------------------------------
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | PanDA job id: 6963188189
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | task id: 47898826
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | errors: (none)
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | pilot state: finished 
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | transexitcode: 0
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | exeerrorcode: 0
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | exeerrordiag: 
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | exitcode: 0
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | exitmsg: OK
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | cpuconsumptiontime: 45207 s
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | nevents: 400
[2026-01-09 19:41:31] 2026-01-10 00:40:47,061 | INFO     | neventsw: 0
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | pid: 2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | pgrp: 2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | corecount: 8
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | event service: False
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | sizes: {0: 2283800, 1: 2283999, 9: 2284261, 12: 2284289, 11402: 2313632, 11403: 2313631, 11407: 2322813, 11410: 2322869, 11419: 2323063}
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | --------------------------------------------------
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | 
[2026-01-09 19:41:31] 2026-01-10 00:40:47,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | job 6963188189 has completed (purged errors)
[2026-01-09 19:41:31] 2026-01-10 00:40:47,135 | INFO     | overall cleanup function is called
[2026-01-09 19:41:31] 2026-01-10 00:40:48,156 | INFO     | --- collectZombieJob: --- 10, [2806301]
[2026-01-09 19:41:31] 2026-01-10 00:40:48,157 | INFO     | zombie collector waiting for pid 2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:48,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:41:31] 2026-01-10 00:40:48,157 | INFO     | collected zombie processes
[2026-01-09 19:41:31] 2026-01-10 00:40:48,157 | INFO     | will attempt to kill all subprocesses of pid=2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:49,687 | INFO     | process IDs to be killed: [2806301] (in reverse order)
[2026-01-09 19:41:31] 2026-01-10 00:40:49,917 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:41:31] 2026-01-10 00:40:49,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:41:31] 2026-01-10 00:40:49,968 | INFO     | did not find any defunct processes belonging to 2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:50,010 | INFO     | did not find any defunct processes belonging to 2806301
[2026-01-09 19:41:31] 2026-01-10 00:40:50,010 | INFO     | ready for new job
[2026-01-09 19:41:31] 2026-01-10 00:40:50,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:41:31] 2026-01-10 00:40:50,016 | INFO     | ***************************************
[2026-01-09 19:41:31] 2026-01-10 00:40:50,016 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:41:31] 2026-01-10 00:40:50,016 | INFO     | ***************************************
[2026-01-09 19:41:31] 2026-01-10 00:40:50,016 | INFO     | 
[2026-01-09 19:41:31] 2026-01-10 00:40:50,025 | INFO     | architecture information:
[2026-01-09 19:41:31] 2026-01-10 00:40:50,029 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:41:31] 2026-01-10 00:40:50,043 | INFO     | cat /etc/os-release:
[2026-01-09 19:41:31] NAME="CentOS Linux"
[2026-01-09 19:41:31] VERSION="7 (Core)"
[2026-01-09 19:41:31] ID="centos"
[2026-01-09 19:41:31] ID_LIKE="rhel fedora"
[2026-01-09 19:41:31] VERSION_ID="7"
[2026-01-09 19:41:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:41:31] ANSI_COLOR="0;31"
[2026-01-09 19:41:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:41:31] HOME_URL="https://www.centos.org/"
[2026-01-09 19:41:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:41:31] 
[2026-01-09 19:41:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:41:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:41:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:41:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:41:31] 
[2026-01-09 19:41:31] 2026-01-10 00:40:50,044 | INFO     | ***************************************
[2026-01-09 19:41:31] 2026-01-10 00:40:50,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 19:41:31] 2026-01-10 00:40:50,606 | INFO     | sufficient remaining disk space (73452748800 B)
[2026-01-09 19:41:31] 2026-01-10 00:40:50,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:41:31] 2026-01-10 00:40:50,607 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:41:31] 2026-01-10 00:40:50,607 | INFO     | update_server=False
[2026-01-09 19:41:31] 2026-01-10 00:40:50,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:41:31] 2026-01-10 00:40:50,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:41:31] 2026-01-10 00:40:51,014 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 19:41:31] 2026-01-10 00:40:51,014 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 19:41:31] 2026-01-10 00:40:51,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:41:31] 2026-01-10 00:40:51,014 | INFO     | will abort loop
[2026-01-09 19:41:31] 2026-01-10 00:40:51,075 | INFO     | all job control threads have been joined
[2026-01-09 19:41:31] 2026-01-10 00:40:51,504 | INFO     | all data control threads have been joined
[2026-01-09 19:41:31] 2026-01-10 00:40:51,589 | INFO     | all payload control threads have been joined
[2026-01-09 19:41:31] 2026-01-10 00:40:51,615 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:51,792 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,020 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,026 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,081 | INFO     | [job] control thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:41:31] 2026-01-10 00:40:52,111 | INFO     | [job] validate thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,512 | INFO     | [data] control thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,560 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,595 | INFO     | [payload] control thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,731 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:41:31] 2026-01-10 00:40:52,787 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:52,968 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:53,088 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:53,183 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:40:56,801 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:41:31] 2026-01-10 00:41:22,034 | INFO     | PID=2793091 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:41:31] 2026-01-10 00:41:22,034 | INFO     | .. there are 28 such processes running
[2026-01-09 19:41:31] 2026-01-10 00:41:22,034 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:41:31] 2026-01-10 00:41:22,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:41:31] 2026-01-10 00:41:22,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:41:31] 2026-01-10 00:41:24,775 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:41:31] 2026-01-10 00:41:24,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395931154240)>', '<ExcThread(monitor, started 140395149252352)>']
[2026-01-09 19:41:31] 2026-01-10 00:41:25,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:41:31] 2026-01-10 00:41:25,060 | INFO     | [monitor] control thread has ended
[2026-01-09 19:41:31] 2026-01-10 00:41:29,999 | INFO     | all workflow threads have been joined
[2026-01-09 19:41:31] 2026-01-10 00:41:30,006 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:41:31] 2026-01-10 00:41:30,006 | INFO     | traces error code: 0
[2026-01-09 19:41:31] 2026-01-10 00:41:30,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:41:31] 2026-01-10 00:41:30,782 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:41:31] 2026-01-10 00:41:30,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:41:31] 2026-01-10 00:41:30,787 [wrapper] pilotpid: 2793091
[2026-01-09 19:41:31] 2026-01-10 00:41:30,789 [wrapper] Pilot exit status: 0
[2026-01-09 19:41:31] 2026-01-10 00:41:30,817 [wrapper] pandaids: 6963188189
[2026-01-09 19:41:31] 2026-01-10 00:41:30,952 [wrapper] cleanup supervisor_pilot 3455558 2793092
[2026-01-09 19:41:31] 2026-01-10 00:41:30,955 [wrapper] Test setup, not cleaning
[2026-01-09 19:41:31] 2026-01-10 00:41:30,959 [wrapper] apfmon messages muted
[2026-01-09 19:41:31] 2026-01-10 00:41:30,961 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:41:31] 2026-01-10 00:41:30,963 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:41:31]  *** Error codes and diagnostics ***
[2026-01-09 19:41:31]     "exeErrorCode": 0,
[2026-01-09 19:41:31]     "exeErrorDiag": "",
[2026-01-09 19:41:31]     "pilotErrorCode": 0,
[2026-01-09 19:41:31]     "pilotErrorDiag": "",
[2026-01-09 19:41:31]  *** Listing of results directory ***
[2026-01-09 19:41:31] total 435056
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:41:31] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:41:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:29 run_atlas
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:29 job.xml
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas 222825370 Jan  9 16:29 EVNT.47898824._001432.pool.root.1
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:29 start_atlas.sh
[2026-01-09 19:41:31] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:29 shared
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas    592408 Jan  9 16:29 input.tar.gz
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:29 boinc_lockfile
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 16:29 pandaJob.out
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas        57 Jan  9 16:29 setup.sh.local
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas    989398 Jan  9 16:30 agis_schedconf.cvmfs.json
[2026-01-09 19:41:31] drwx------. 5 boincer umatlas      4096 Jan  9 16:30 pilot3
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas 214841006 Jan  9 19:38 HITS.47898826._037342.pool.root.1
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas       530 Jan  9 19:38 boinc_task_state.xml
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 19:38 init_data.xml
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas      1042 Jan  9 19:40 memory_monitor_summary.json
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas    429389 Jan  9 19:40 log.47898826._037342.job.log.tgz.1
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas        95 Jan  9 19:40 pilot_heartbeat.json
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas      7793 Jan  9 19:40 heartbeat.json
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas      5010 Jan  9 19:41 pilotlog.txt
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:41 boinc_mmap_file
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas   1526384 Jan  9 19:41 log.47898826._037342.job.log.1
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:41 wrapper_checkpoint.txt
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas       357 Jan  9 19:41 output.list
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:41 runtime_log
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas   1976320 Jan  9 19:41 result.tar.gz
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 19:41 runtime_log.err
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas       657 Jan  9 19:41 8gtNDmvEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi6gKDmGVtnum.diag
[2026-01-09 19:41:31] -rw-r--r--. 1 boincer umatlas     21049 Jan  9 19:41 stderr.txt
[2026-01-09 19:41:31] HITS file was successfully produced:
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas 214841006 Jan  9 19:38 shared/HITS.pool.root.1
[2026-01-09 19:41:31]  *** Contents of shared directory: ***
[2026-01-09 19:41:31] total 429948
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas 222825370 Jan  9 16:29 ATLAS.root_0
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:29 start_atlas.sh
[2026-01-09 19:41:31] -rw-r--r--. 2 boincer umatlas    592408 Jan  9 16:29 input.tar.gz
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas 214841006 Jan  9 19:38 HITS.pool.root.1
[2026-01-09 19:41:31] -rw-------. 1 boincer umatlas   1976320 Jan  9 19:41 result.tar.gz
19:41:32 (2785260): run_atlas exited; CPU time 45695.350314
19:41:32 (2785260): called boinc_finish(0)

</stderr_txt>
]]>

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