Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (592952): wrapper (7.7.26015): starting
00:03:54 (592952): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 00:03:54] Arguments: --nthreads 12
[2026-01-10 00:03:54] Threads: 12
[2026-01-10 00:03:54] Checking for CVMFS
[2026-01-10 00:03:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:03:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:03:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:03:58] 2.13.3.0 870035 17905 154660 154968 3 64 39196743 39288833 9894 16776704 0 8924287 99.507 10478334 37998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 00:03:58] CVMFS is ok
[2026-01-10 00:03:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:03:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:03:58] Further information can be found at the LHC@home message board.
[2026-01-10 00:03:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:03:58] Checking for apptainer binary...
[2026-01-10 00:03:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:03:58] Running /usr/bin/apptainer --version
[2026-01-10 00:03:59] apptainer version 1.4.5-2.el9
[2026-01-10 00:03:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:04:02] c-210-20.aglt2.org
[2026-01-10 00:04:02] apptainer works
[2026-01-10 00:04:02] Set ATHENA_PROC_NUMBER=12
[2026-01-10 00:04:02] Set ATHENA_CORE_NUMBER=12
[2026-01-10 00:04:02] Starting ATLAS job with PandaID=6963188934
[2026-01-10 00:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:54:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:54:43] 2026-01-11 03:36:56,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:54:43] 2026-01-11 03:36:56,928 | INFO     | time since job start (81080s) is within the limit (349056.0s)
[2026-01-10 23:54:43] 2026-01-11 03:36:58,948 | INFO     | time since job start (81082s) is within the limit (349056.0s)
[2026-01-10 23:54:43] 2026-01-11 03:36:59,046 | INFO     | monitor loop #4830: job 0:6963188934 is in state 'finished'
[2026-01-10 23:54:43] 2026-01-11 03:36:59,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:54:43] 2026-01-11 03:37:00,955 | INFO     | time since job start (81084s) is within the limit (349056.0s)
[2026-01-10 23:54:43] 2026-01-11 03:37:01,555 | INFO     | monitor loop #4831: job 0:6963188934 is in state 'finished'
[2026-01-10 23:54:43] 2026-01-11 03:37:01,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,746 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 23:54:43] 2026-01-11 03:37:02,753 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8374749999994
[2026-01-10 23:54:43] 2026-01-11 03:37:02,759 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963188934/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,760 | INFO     | extracted standard info from prmon json
[2026-01-10 23:54:43] 2026-01-11 03:37:02,760 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:54:43] 2026-01-11 03:37:02,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:54:43] 2026-01-11 03:37:02,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:54:43] 2026-01-11 03:37:02,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:54:43] 2026-01-11 03:37:02,784 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:54:43] 2026-01-11 03:37:02,786 | INFO     | sum of square deviations: 722913538678.9114
[2026-01-10 23:54:43] 2026-01-11 03:37:02,829 | INFO     | sum of deviations: 3258418459713.5547
[2026-01-10 23:54:43] 2026-01-11 03:37:02,830 | INFO     | mean x: 1768062146.9517345
[2026-01-10 23:54:43] 2026-01-11 03:37:02,830 | INFO     | mean y: 2639474.3212669683
[2026-01-10 23:54:43] 2026-01-11 03:37:02,830 | INFO     | intersect: -7966621065.571804
[2026-01-10 23:54:43] 2026-01-11 03:37:02,832 | INFO     | chi2: 13.62251651768416
[2026-01-10 23:54:43] 2026-01-11 03:37:02,833 | INFO     | sum of square deviations: 714766745125.8317
[2026-01-10 23:54:43] 2026-01-11 03:37:02,876 | INFO     | sum of deviations: 3704746787336.2944
[2026-01-10 23:54:43] 2026-01-11 03:37:02,877 | INFO     | mean x: 1768061994.4572294
[2026-01-10 23:54:43] 2026-01-11 03:37:02,877 | INFO     | mean y: 2647828.91672975
[2026-01-10 23:54:43] 2026-01-11 03:37:02,877 | INFO     | intersect: -9161491435.317904
[2026-01-10 23:54:43] 2026-01-11 03:37:02,879 | INFO     | chi2: 10.043270970191658
[2026-01-10 23:54:43] 2026-01-11 03:37:02,879 | INFO     | current chi2=10.043270970191658 (change=26.27448124468104 %)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,881 | INFO     | sum of square deviations: 706681394585.1755
[2026-01-10 23:54:43] 2026-01-11 03:37:02,922 | INFO     | sum of deviations: 3685229880514.126
[2026-01-10 23:54:43] 2026-01-11 03:37:02,923 | INFO     | mean x: 1768061841.962766
[2026-01-10 23:54:43] 2026-01-11 03:37:02,923 | INFO     | mean y: 2647460.9414893617
[2026-01-10 23:54:43] 2026-01-11 03:37:02,923 | INFO     | intersect: -9217510845.932821
[2026-01-10 23:54:43] 2026-01-11 03:37:02,925 | INFO     | chi2: 10.038020212093514
[2026-01-10 23:54:43] 2026-01-11 03:37:02,925 | INFO     | current chi2=10.038020212093514 (change=0.052281354488280404 %)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,925 | INFO     | right removable region: 1315
[2026-01-10 23:54:43] 2026-01-11 03:37:02,927 | INFO     | sum of square deviations: 714765732529.6598
[2026-01-10 23:54:43] 2026-01-11 03:37:02,970 | INFO     | time since job start (81086s) is within the limit (349056.0s)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,972 | INFO     | sum of deviations: 2849146905958.552
[2026-01-10 23:54:43] 2026-01-11 03:37:02,973 | INFO     | mean x: 1768062299.4557154
[2026-01-10 23:54:43] 2026-01-11 03:37:02,973 | INFO     | mean y: 2647132.1718395157
[2026-01-10 23:54:43] 2026-01-11 03:37:02,973 | INFO     | intersect: -7045073541.576576
[2026-01-10 23:54:43] 2026-01-11 03:37:02,974 | INFO     | chi2: 10.61015371350571
[2026-01-10 23:54:43] 2026-01-11 03:37:02,975 | INFO     | current chi2=10.61015371350571 (change=22.113115445798364 %)
[2026-01-10 23:54:43] 2026-01-11 03:37:02,975 | INFO     | left removable region: 10
[2026-01-10 23:54:43] 2026-01-11 03:37:02,976 | INFO     | sum of square deviations: 689106809255.1719
[2026-01-10 23:54:43] 2026-01-11 03:37:03,033 | INFO     | sum of deviations: 2928170914822.4004
[2026-01-10 23:54:43] 2026-01-11 03:37:03,033 | INFO     | mean x: 1768062116.4712644
[2026-01-10 23:54:43] 2026-01-11 03:37:03,033 | INFO     | mean y: 2661786.277394636
[2026-01-10 23:54:43] 2026-01-11 03:37:03,034 | INFO     | intersect: -7510234611.664615
[2026-01-10 23:54:43] 2026-01-11 03:37:03,061 | INFO     | chi2: 4.957558828778789
[2026-01-10 23:54:43] 2026-01-11 03:37:03,062 | INFO     | current memory leak: 4.25 B/s (using 1305 data points, chi2=4.96)
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | could have reported an average CPU frequency of 2599 MHz (48 samples)
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | ..............................
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | . Timing measurements:
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | . get job = 2 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | . initial setup = 6 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | . payload setup = 58 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,092 | INFO     | . stage-in = 0 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,093 | INFO     | . payload execution = 80870 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,093 | INFO     | . stage-out = 10 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,093 | INFO     | . log creation = 1 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,093 | INFO     | ..............................
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | 
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | job summary report
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | --------------------------------------------------
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | PanDA job id: 6963188934
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | task id: 47898826
[2026-01-10 23:54:43] 2026-01-11 03:37:03,438 | INFO     | errors: (none)
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | pilot state: finished 
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | transexitcode: 0
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | exeerrorcode: 0
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | exeerrordiag: 
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | exitcode: 0
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | exitmsg: OK
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | cpuconsumptiontime: 71483 s
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | nevents: 400
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | neventsw: 0
[2026-01-10 23:54:43] 2026-01-11 03:37:03,439 | INFO     | pid: 608421
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | pgrp: 608421
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | corecount: 12
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | event service: False
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 3: 2284055, 4: 2284083, 15: 2284083, 26: 2284239, 38: 2284267, 46: 2284557, 49: 2284585, 80934: 2344814, 80935: 2345093
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | --------------------------------------------------
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | 
[2026-01-10 23:54:43] 2026-01-11 03:37:03,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 23:54:43] 2026-01-11 03:37:03,460 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:54:43] 2026-01-11 03:37:03,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,463 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:54:43] 2026-01-11 03:37:03,463 | INFO     | job 6963188934 has completed (purged errors)
[2026-01-10 23:54:43] 2026-01-11 03:37:03,463 | INFO     | overall cleanup function is called
[2026-01-10 23:54:43] 2026-01-11 03:37:04,473 | INFO     | --- collectZombieJob: --- 10, [608421]
[2026-01-10 23:54:43] 2026-01-11 03:37:04,474 | INFO     | zombie collector waiting for pid 608421
[2026-01-10 23:54:43] 2026-01-11 03:37:04,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:54:43] 2026-01-11 03:37:04,474 | INFO     | collected zombie processes
[2026-01-10 23:54:43] 2026-01-11 03:37:04,474 | INFO     | will attempt to kill all subprocesses of pid=608421
[2026-01-10 23:54:43] 2026-01-11 03:37:05,469 | INFO     | process IDs to be killed: [608421] (in reverse order)
[2026-01-10 23:54:43] 2026-01-11 03:37:05,951 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:54:43] 2026-01-11 03:37:05,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:54:43] 2026-01-11 03:37:06,028 | INFO     | did not find any defunct processes belonging to 608421
[2026-01-10 23:54:43] 2026-01-11 03:37:06,136 | INFO     | did not find any defunct processes belonging to 608421
[2026-01-10 23:54:43] 2026-01-11 03:37:06,136 | INFO     | ready for new job
[2026-01-10 23:54:43] 2026-01-11 03:37:06,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:54:43] 2026-01-11 03:37:06,186 | INFO     | ***************************************
[2026-01-10 23:54:43] 2026-01-11 03:37:06,187 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:54:43] 2026-01-11 03:37:06,187 | INFO     | ***************************************
[2026-01-10 23:54:43] 2026-01-11 03:37:06,187 | INFO     | 
[2026-01-10 23:54:43] 2026-01-11 03:37:06,189 | INFO     | architecture information:
[2026-01-10 23:54:43] 2026-01-11 03:37:06,198 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:54:43] 2026-01-11 03:37:06,292 | INFO     | cat /etc/os-release:
[2026-01-10 23:54:43] NAME="CentOS Linux"
[2026-01-10 23:54:43] VERSION="7 (Core)"
[2026-01-10 23:54:43] ID="centos"
[2026-01-10 23:54:43] ID_LIKE="rhel fedora"
[2026-01-10 23:54:43] VERSION_ID="7"
[2026-01-10 23:54:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:54:43] ANSI_COLOR="0;31"
[2026-01-10 23:54:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:54:43] HOME_URL="https://www.centos.org/"
[2026-01-10 23:54:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:54:43] 
[2026-01-10 23:54:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:54:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:54:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:54:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:54:43] 
[2026-01-10 23:54:43] 2026-01-11 03:37:06,292 | INFO     | ***************************************
[2026-01-10 23:54:43] 2026-01-11 03:37:06,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 23:54:43] 2026-01-11 03:37:06,849 | INFO     | sufficient remaining disk space (51443138560 B)
[2026-01-10 23:54:43] 2026-01-11 03:37:06,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:54:43] 2026-01-11 03:37:06,850 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:54:43] 2026-01-11 03:37:06,850 | INFO     | update_server=False
[2026-01-10 23:54:43] 2026-01-11 03:37:06,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:54:43] 2026-01-11 03:37:06,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:54:43] 2026-01-11 03:37:07,002 | INFO     | all job control threads have been joined
[2026-01-10 23:54:43] 2026-01-11 03:37:07,084 | INFO     | all data control threads have been joined
[2026-01-10 23:54:43] 2026-01-11 03:37:07,350 | INFO     | all payload control threads have been joined
[2026-01-10 23:54:43] 2026-01-11 03:37:07,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:54:43] 2026-01-11 03:37:07,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:54:43] 2026-01-11 03:37:07,698 | INFO     | aborting loop
[2026-01-10 23:54:43] 2026-01-11 03:37:07,856 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,008 | INFO     | [job] control thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,090 | INFO     | [data] control thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,356 | INFO     | [payload] control thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:54:43] 2026-01-11 03:37:08,542 | INFO     | [job] validate thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,548 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,704 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,744 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,857 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,919 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:08,950 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:09,250 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:09,522 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:11,359 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:54:43] 2026-01-11 03:37:39,585 | INFO     | PID=599650 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 23:54:43] 2026-01-11 03:37:39,585 | INFO     | .. there are 7 such processes running
[2026-01-10 23:54:43] 2026-01-11 03:37:39,635 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:54:43] 2026-01-11 03:37:39,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:54:43] 2026-01-11 03:37:39,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:54:43] 2026-01-11 03:38:03,572 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:54:43] 2026-01-11 03:38:05,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002353076032)>', '<ExcThread(monitor, started 140001908094720)>']
[2026-01-10 23:54:43] 2026-01-11 03:38:05,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:54:43] 2026-01-11 03:38:05,832 | INFO     | [monitor] control thread has ended
[2026-01-10 23:54:43] 2026-01-11 03:38:10,078 | INFO     | all workflow threads have been joined
[2026-01-10 23:54:43] 2026-01-11 03:38:10,082 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:54:43] 2026-01-11 03:38:10,082 | INFO     | traces error code: 0
[2026-01-10 23:54:43] 2026-01-11 03:38:10,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:54:43] 2026-01-11 03:38:11,058 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:54:43] 2026-01-11 03:38:11,134 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:54:43] 2026-01-11 03:38:11,167 [wrapper] pilotpid: 599650
[2026-01-10 23:54:43] 2026-01-11 03:38:11,212 [wrapper] Pilot exit status: 0
[2026-01-10 23:54:43] 2026-01-11 03:38:11,318 [wrapper] pandaids: 6963188934
[2026-01-10 23:54:43] 2026-01-11 03:38:11,757 [wrapper] cleanup supervisor_pilot 2518326 599651
[2026-01-10 23:54:43] 2026-01-11 03:38:11,779 [wrapper] Test setup, not cleaning
[2026-01-10 23:54:43] 2026-01-11 03:38:11,799 [wrapper] apfmon messages muted
[2026-01-10 23:54:43] 2026-01-11 03:38:11,824 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:54:43] 2026-01-11 03:38:11,844 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:54:43]  *** Error codes and diagnostics ***
[2026-01-10 23:54:43]     "exeErrorCode": 0,
[2026-01-10 23:54:43]     "exeErrorDiag": "",
[2026-01-10 23:54:43]     "pilotErrorCode": 0,
[2026-01-10 23:54:43]     "pilotErrorDiag": "",
[2026-01-10 23:54:43]  *** Listing of results directory ***
[2026-01-10 23:54:43] total 465476
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 23:54:43] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas       100 Jan 10 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:54:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 00:03 run_atlas
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas       105 Jan 10 00:03 job.xml
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas 225271768 Jan 10 00:03 EVNT.47898824._001453.pool.root.1
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:03 start_atlas.sh
[2026-01-10 23:54:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 00:03 shared
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 00:03 input.tar.gz
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas         0 Jan 10 00:03 boinc_lockfile
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas      2520 Jan 10 00:04 pandaJob.out
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas        57 Jan 10 00:04 setup.sh.local
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas    989374 Jan 10 00:05 agis_schedconf.cvmfs.json
[2026-01-10 23:54:43] drwx------. 5 boincer umatlas      4096 Jan 10 00:05 pilot3
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas 224744451 Jan 10 22:30 HITS.47898826._037871.pool.root.1
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas       530 Jan 10 22:31 boinc_task_state.xml
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas      1039 Jan 10 22:36 memory_monitor_summary.json
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas   1516240 Jan 10 22:36 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas   1369797 Jan 10 22:36 log.47898826._037871.job.log.tgz.1
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas      7829 Jan 10 22:37 heartbeat.json
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas        95 Jan 10 22:37 pilot_heartbeat.json
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas      4822 Jan 10 22:38 pilotlog.txt
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas   9989888 Jan 10 22:38 log.47898826._037871.job.log.1
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas       357 Jan 10 22:38 output.list
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas       620 Jan 10 22:38 runtime_log
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas  11376640 Jan 10 22:38 result.tar.gz
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 22:38 runtime_log.err
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas       657 Jan 10 22:38 rbpLDmLFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT9gKDmOoV22n.diag
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas      6657 Jan 10 23:54 init_data.xml
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 23:54 boinc_mmap_file
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas        27 Jan 10 23:54 wrapper_checkpoint.txt
[2026-01-10 23:54:43] -rw-r--r--. 1 boincer umatlas     21451 Jan 10 23:54 stderr.txt
[2026-01-10 23:54:43] HITS file was successfully produced:
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas 224744451 Jan 10 22:30 shared/HITS.pool.root.1
[2026-01-10 23:54:43]  *** Contents of shared directory: ***
[2026-01-10 23:54:43] total 451184
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas 225271768 Jan 10 00:03 ATLAS.root_0
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:03 start_atlas.sh
[2026-01-10 23:54:43] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 00:03 input.tar.gz
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas 224744451 Jan 10 22:30 HITS.pool.root.1
[2026-01-10 23:54:43] -rw-------. 1 boincer umatlas  11376640 Jan 10 22:38 result.tar.gz
23:54:45 (592952): run_atlas exited; CPU time 73417.197509
23:54:45 (592952): called boinc_finish(0)

</stderr_txt>
]]>

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