Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:22 (244982): wrapper (7.7.26015): starting
15:54:22 (244982): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:54:22] Arguments: --nthreads 8
[2026-01-09 15:54:22] Threads: 8
[2026-01-09 15:54:22] Checking for CVMFS
[2026-01-09 15:54:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:54:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:54:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:54:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:54:24] 2.13.3.0 12977 93914 624032 154956 0 804 28083966 32935936 21703 16776704 0 418264933 99.548 508483369 33666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 15:54:24] CVMFS is ok
[2026-01-09 15:54:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:54:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:54:24] Further information can be found at the LHC@home message board.
[2026-01-09 15:54:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:54:24] Checking for apptainer binary...
[2026-01-09 15:54:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:54:24] Running /usr/bin/apptainer --version
[2026-01-09 15:54:24] apptainer version 1.4.5-2.el9
[2026-01-09 15:54:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:54:25] c6-12-29-1.aglt2.org
[2026-01-09 15:54:25] apptainer works
[2026-01-09 15:54:25] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:54:25] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:54:25] Starting ATLAS job with PandaID=6963193601
[2026-01-09 15:54:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:47:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:47:56] 2026-01-10 09:46:49,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:47:56] 2026-01-10 09:46:49,768 | INFO     | time since job start (46281s) is within the limit (349056.0s)
[2026-01-10 04:47:56] 2026-01-10 09:46:51,775 | INFO     | time since job start (46283s) is within the limit (349056.0s)
[2026-01-10 04:47:56] 2026-01-10 09:46:52,049 | INFO     | monitor loop #2783: job 0:6963193601 is in state 'finished'
[2026-01-10 04:47:56] 2026-01-10 09:46:52,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:47:56] 2026-01-10 09:46:53,786 | INFO     | time since job start (46285s) is within the limit (349056.0s)
[2026-01-10 04:47:56] 2026-01-10 09:46:54,554 | INFO     | monitor loop #2784: job 0:6963193601 is in state 'finished'
[2026-01-10 04:47:56] 2026-01-10 09:46:54,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:47:56] 2026-01-10 09:46:55,800 | INFO     | time since job start (46287s) is within the limit (349056.0s)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,633 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 04:47:56] 2026-01-10 09:46:56,668 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2712.562541666666
[2026-01-10 04:47:56] 2026-01-10 09:46:56,767 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963193601/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,768 | INFO     | extracted standard info from prmon json
[2026-01-10 04:47:56] 2026-01-10 09:46:56,768 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:47:56] 2026-01-10 09:46:56,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:47:56] 2026-01-10 09:46:56,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:47:56] 2026-01-10 09:46:56,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:47:56] 2026-01-10 09:46:56,794 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:47:56] 2026-01-10 09:46:56,800 | INFO     | sum of square deviations: 133981548571.41144
[2026-01-10 04:47:56] 2026-01-10 09:46:56,825 | INFO     | sum of deviations: 418842195206.78723
[2026-01-10 04:47:56] 2026-01-10 09:46:56,829 | INFO     | mean x: 1768015285.5859787
[2026-01-10 04:47:56] 2026-01-10 09:46:56,830 | INFO     | mean y: 2507352.564814815
[2026-01-10 04:47:56] 2026-01-10 09:46:56,830 | INFO     | intersect: -5524517907.777608
[2026-01-10 04:47:56] 2026-01-10 09:46:56,831 | INFO     | chi2: 3.328445777405717
[2026-01-10 04:47:56] 2026-01-10 09:46:56,832 | INFO     | sum of square deviations: 131340756091.37401
[2026-01-10 04:47:56] 2026-01-10 09:46:56,854 | INFO     | sum of deviations: 463285153021.9918
[2026-01-10 04:47:56] 2026-01-10 09:46:56,854 | INFO     | mean x: 1768015133.0865512
[2026-01-10 04:47:56] 2026-01-10 09:46:56,854 | INFO     | mean y: 2509903.830892144
[2026-01-10 04:47:56] 2026-01-10 09:46:56,855 | INFO     | intersect: -6233902812.625179
[2026-01-10 04:47:56] 2026-01-10 09:46:56,860 | INFO     | chi2: 2.616912670026833
[2026-01-10 04:47:56] 2026-01-10 09:46:56,860 | INFO     | current chi2=2.616912670026833 (change=21.3773381020337 %)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,860 | INFO     | right removable region: 750
[2026-01-10 04:47:56] 2026-01-10 09:46:56,861 | INFO     | sum of square deviations: 131340762312.54594
[2026-01-10 04:47:56] 2026-01-10 09:46:56,886 | INFO     | sum of deviations: 228778794715.88422
[2026-01-10 04:47:56] 2026-01-10 09:46:56,891 | INFO     | mean x: 1768015438.0852196
[2026-01-10 04:47:56] 2026-01-10 09:46:56,891 | INFO     | mean y: 2518314.6111850864
[2026-01-10 04:47:56] 2026-01-10 09:46:56,891 | INFO     | intersect: -3077138250.817287
[2026-01-10 04:47:56] 2026-01-10 09:46:56,892 | INFO     | chi2: 0.9287485838787221
[2026-01-10 04:47:56] 2026-01-10 09:46:56,892 | INFO     | current chi2=0.9287485838787221 (change=72.09662869729505 %)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,893 | INFO     | sum of square deviations: 128734861375.00935
[2026-01-10 04:47:56] 2026-01-10 09:46:56,917 | INFO     | sum of deviations: 173191113628.13138
[2026-01-10 04:47:56] 2026-01-10 09:46:56,917 | INFO     | mean x: 1768015590.5857909
[2026-01-10 04:47:56] 2026-01-10 09:46:56,918 | INFO     | mean y: 2521565.201072386
[2026-01-10 04:47:56] 2026-01-10 09:46:56,918 | INFO     | intersect: -2376046180.74512
[2026-01-10 04:47:56] 2026-01-10 09:46:56,919 | INFO     | chi2: 0.7575018438787863
[2026-01-10 04:47:56] 2026-01-10 09:46:56,919 | INFO     | current chi2=0.7575018438787863 (change=18.43843888135581 %)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,919 | INFO     | left removable region: 20
[2026-01-10 04:47:56] 2026-01-10 09:46:56,924 | INFO     | sum of square deviations: 120628097465.06323
[2026-01-10 04:47:56] 2026-01-10 09:46:56,948 | INFO     | sum of deviations: 180541045990.07928
[2026-01-10 04:47:56] 2026-01-10 09:46:56,948 | INFO     | mean x: 1768015712.5863013
[2026-01-10 04:47:56] 2026-01-10 09:46:56,948 | INFO     | mean y: 2526468.3479452054
[2026-01-10 04:47:56] 2026-01-10 09:46:56,948 | INFO     | intersect: -2643618275.5801764
[2026-01-10 04:47:56] 2026-01-10 09:46:56,950 | INFO     | chi2: 0.0083164082022279
[2026-01-10 04:47:56] 2026-01-10 09:46:56,950 | INFO     | current memory leak: 1.50 B/s (using 730 data points, chi2=0.01)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | could have reported an average CPU frequency of 2643 MHz (29 samples)
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | ..............................
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | . Timing measurements:
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | . get job = 0 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | . initial setup = 3 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | . payload setup = 37 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,955 | INFO     | . stage-in = 0 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,956 | INFO     | . payload execution = 46141 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,956 | INFO     | . stage-out = 5 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,956 | INFO     | . log creation = 1 s
[2026-01-10 04:47:56] 2026-01-10 09:46:56,956 | INFO     | ..............................
[2026-01-10 04:47:56] 2026-01-10 09:46:57,332 | INFO     | 
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | job summary report
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | --------------------------------------------------
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | PanDA job id: 6963193601
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | task id: 47898826
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | errors: (none)
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | pilot state: finished 
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | transexitcode: 0
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | exeerrorcode: 0
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | exeerrordiag: 
[2026-01-10 04:47:56] 2026-01-10 09:46:57,333 | INFO     | exitcode: 0
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | exitmsg: OK
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | cpuconsumptiontime: 59973 s
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | nevents: 400
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | neventsw: 0
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | pid: 264598
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | pgrp: 264598
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | corecount: 8
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | event service: False
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2284027, 13: 2284027, 24: 2284083, 31: 2284373, 35: 2284529, 46183: 2329678, 46184: 2329677, 46190: 2338731, 46194: 2338787, 462
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | --------------------------------------------------
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | 
[2026-01-10 04:47:56] 2026-01-10 09:46:57,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:47:56] 2026-01-10 09:46:57,439 | INFO     | job 6963193601 has completed (purged errors)
[2026-01-10 04:47:56] 2026-01-10 09:46:57,439 | INFO     | overall cleanup function is called
[2026-01-10 04:47:56] 2026-01-10 09:46:58,452 | INFO     | --- collectZombieJob: --- 10, [264598]
[2026-01-10 04:47:56] 2026-01-10 09:46:58,453 | INFO     | zombie collector waiting for pid 264598
[2026-01-10 04:47:56] 2026-01-10 09:46:58,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:47:56] 2026-01-10 09:46:58,453 | INFO     | collected zombie processes
[2026-01-10 04:47:56] 2026-01-10 09:46:58,453 | INFO     | will attempt to kill all subprocesses of pid=264598
[2026-01-10 04:47:56] 2026-01-10 09:46:59,665 | INFO     | process IDs to be killed: [264598] (in reverse order)
[2026-01-10 04:47:56] 2026-01-10 09:47:00,110 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:47:56] 2026-01-10 09:47:00,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:47:56] 2026-01-10 09:47:00,146 | INFO     | did not find any defunct processes belonging to 264598
[2026-01-10 04:47:56] 2026-01-10 09:47:00,182 | INFO     | did not find any defunct processes belonging to 264598
[2026-01-10 04:47:56] 2026-01-10 09:47:00,186 | INFO     | ready for new job
[2026-01-10 04:47:56] 2026-01-10 09:47:00,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:47:56] 2026-01-10 09:47:00,192 | INFO     | ***************************************
[2026-01-10 04:47:56] 2026-01-10 09:47:00,192 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:47:56] 2026-01-10 09:47:00,192 | INFO     | ***************************************
[2026-01-10 04:47:56] 2026-01-10 09:47:00,192 | INFO     | 
[2026-01-10 04:47:56] 2026-01-10 09:47:00,202 | INFO     | architecture information:
[2026-01-10 04:47:56] 2026-01-10 09:47:00,206 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:47:56] 2026-01-10 09:47:00,262 | INFO     | cat /etc/os-release:
[2026-01-10 04:47:56] NAME="CentOS Linux"
[2026-01-10 04:47:56] VERSION="7 (Core)"
[2026-01-10 04:47:56] ID="centos"
[2026-01-10 04:47:56] ID_LIKE="rhel fedora"
[2026-01-10 04:47:56] VERSION_ID="7"
[2026-01-10 04:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:47:56] ANSI_COLOR="0;31"
[2026-01-10 04:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:47:56] HOME_URL="https://www.centos.org/"
[2026-01-10 04:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:47:56] 
[2026-01-10 04:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:47:56] 
[2026-01-10 04:47:56] 2026-01-10 09:47:00,262 | INFO     | ***************************************
[2026-01-10 04:47:56] 2026-01-10 09:47:00,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 04:47:56] 2026-01-10 09:47:00,805 | INFO     | sufficient remaining disk space (94342479872 B)
[2026-01-10 04:47:56] 2026-01-10 09:47:00,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:47:56] 2026-01-10 09:47:00,805 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:47:56] 2026-01-10 09:47:00,805 | INFO     | update_server=False
[2026-01-10 04:47:56] 2026-01-10 09:47:00,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:47:56] 2026-01-10 09:47:00,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:47:56] 2026-01-10 09:47:00,807 | INFO     | aborting loop
[2026-01-10 04:47:56] 2026-01-10 09:47:01,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:47:56] 2026-01-10 09:47:01,168 | INFO     | all data control threads have been joined
[2026-01-10 04:47:56] 2026-01-10 09:47:01,803 | INFO     | all payload control threads have been joined
[2026-01-10 04:47:56] 2026-01-10 09:47:01,811 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:01,813 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:01,892 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,174 | INFO     | [data] control thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:47:56] 2026-01-10 09:47:02,334 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,335 | INFO     | [job] validate thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,403 | INFO     | all job control threads have been joined
[2026-01-10 04:47:56] 2026-01-10 09:47:02,426 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,684 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:02,809 | INFO     | [payload] control thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,130 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,141 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,159 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,189 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:03,409 | INFO     | [job] control thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:04,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:47:56] 2026-01-10 09:47:08,252 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:47:56] 2026-01-10 09:47:31,701 | INFO     | PID=254928 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:47:56] 2026-01-10 09:47:31,701 | INFO     | .. there are 22 such processes running
[2026-01-10 04:47:56] 2026-01-10 09:47:31,702 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:47:56] 2026-01-10 09:47:31,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:47:56] 2026-01-10 09:47:31,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:47:56] 2026-01-10 09:47:49,071 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:47:56] 2026-01-10 09:47:49,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918345623360)>', '<ExcThread(monitor, started 139917845833472)>']
[2026-01-10 04:47:56] 2026-01-10 09:47:49,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:47:56] 2026-01-10 09:47:49,885 | INFO     | [monitor] control thread has ended
[2026-01-10 04:47:56] 2026-01-10 09:47:54,456 | INFO     | all workflow threads have been joined
[2026-01-10 04:47:56] 2026-01-10 09:47:54,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:47:56] 2026-01-10 09:47:54,457 | INFO     | traces error code: 0
[2026-01-10 04:47:56] 2026-01-10 09:47:54,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:47:56] 2026-01-10 09:47:55,226 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:47:56] 2026-01-10 09:47:55,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:47:56] 2026-01-10 09:47:55,263 [wrapper] pilotpid: 254928
[2026-01-10 04:47:56] 2026-01-10 09:47:55,279 [wrapper] Pilot exit status: 0
[2026-01-10 04:47:56] 2026-01-10 09:47:55,428 [wrapper] pandaids: 6963193601
[2026-01-10 04:47:56] 2026-01-10 09:47:55,517 [wrapper] cleanup supervisor_pilot 2250885 254929
[2026-01-10 04:47:56] 2026-01-10 09:47:55,520 [wrapper] Test setup, not cleaning
[2026-01-10 04:47:56] 2026-01-10 09:47:55,522 [wrapper] apfmon messages muted
[2026-01-10 04:47:56] 2026-01-10 09:47:55,539 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:47:56] 2026-01-10 09:47:55,551 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:47:56]  *** Error codes and diagnostics ***
[2026-01-10 04:47:56]     "exeErrorCode": 0,
[2026-01-10 04:47:56]     "exeErrorDiag": "",
[2026-01-10 04:47:56]     "pilotErrorCode": 0,
[2026-01-10 04:47:56]     "pilotErrorDiag": "",
[2026-01-10 04:47:56]  *** Listing of results directory ***
[2026-01-10 04:47:56] total 447808
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 04:47:56] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:47:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:54 run_atlas
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:54 job.xml
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas 223888093 Jan  9 15:54 EVNT.47898824._001501.pool.root.1
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:54 start_atlas.sh
[2026-01-10 04:47:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:54 shared
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 15:54 input.tar.gz
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:54 boinc_lockfile
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 15:54 pandaJob.out
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas        57 Jan  9 15:54 setup.sh.local
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas    989381 Jan  9 15:55 agis_schedconf.cvmfs.json
[2026-01-10 04:47:56] drwx------. 5 boincer umatlas      4096 Jan  9 15:55 pilot3
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas 217407505 Jan 10 04:44 HITS.47898826._039074.pool.root.1
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas       531 Jan 10 04:45 boinc_task_state.xml
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas      1041 Jan 10 04:46 memory_monitor_summary.json
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas      6880 Jan 10 04:46 init_data.xml
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas    889514 Jan 10 04:46 log.47898826._039074.job.log.tgz.1
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas      7825 Jan 10 04:46 heartbeat.json
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas        95 Jan 10 04:47 pilot_heartbeat.json
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:47 boinc_mmap_file
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:47 wrapper_checkpoint.txt
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas      4823 Jan 10 04:47 pilotlog.txt
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas   5779065 Jan 10 04:47 log.47898826._039074.job.log.1
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas       357 Jan 10 04:47 output.list
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:47 runtime_log
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas   6686720 Jan 10 04:47 result.tar.gz
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 04:47 runtime_log.err
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas       660 Jan 10 04:47 7GFLDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdNmKDmfkSwRm.diag
[2026-01-10 04:47:56] -rw-r--r--. 1 boincer umatlas     21451 Jan 10 04:47 stderr.txt
[2026-01-10 04:47:56] HITS file was successfully produced:
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas 217407505 Jan 10 04:44 shared/HITS.pool.root.1
[2026-01-10 04:47:56]  *** Contents of shared directory: ***
[2026-01-10 04:47:56] total 438096
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas 223888093 Jan  9 15:54 ATLAS.root_0
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:54 start_atlas.sh
[2026-01-10 04:47:56] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 15:54 input.tar.gz
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas 217407505 Jan 10 04:44 HITS.pool.root.1
[2026-01-10 04:47:56] -rw-------. 1 boincer umatlas   6686720 Jan 10 04:47 result.tar.gz
04:47:57 (244982): run_atlas exited; CPU time 62306.216760
04:47:57 (244982): called boinc_finish(0)

</stderr_txt>
]]>

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