Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:10 (745341): wrapper (7.7.26015): starting
16:54:10 (745341): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:54:10] Arguments: --nthreads 8
[2026-01-09 16:54:10] Threads: 8
[2026-01-09 16:54:10] Checking for CVMFS
[2026-01-09 16:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:54:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:54:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:54:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:54:11] 2.13.3.0 12448 23447 229180 154957 1 375 35314183 40960000 26646 16776704 0 89465692 99.661 80146735 37529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 16:54:11] CVMFS is ok
[2026-01-09 16:54:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:54:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:54:11] Further information can be found at the LHC@home message board.
[2026-01-09 16:54:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:54:11] Checking for apptainer binary...
[2026-01-09 16:54:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:54:11] Running /usr/bin/apptainer --version
[2026-01-09 16:54:11] apptainer version 1.4.5-2.el9
[2026-01-09 16:54:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:54:11] c-212-19.aglt2.org
[2026-01-09 16:54:11] apptainer works
[2026-01-09 16:54:11] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:54:11] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:54:11] Starting ATLAS job with PandaID=6963635746
[2026-01-09 16:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:49:34 (971526): wrapper (7.7.26015): starting
17:49:34 (971526): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:49:34] Arguments: --nthreads 8
[2026-01-09 17:49:34] Threads: 8
[2026-01-09 17:49:34] This job has been restarted, cleaning up previous attempt
[2026-01-09 17:49:34] Checking for CVMFS
[2026-01-09 17:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:49:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:49:34] 2.13.3.0 12448 23503 222636 154959 2 176 23779552 40960000 22819 16776704 0 89681648 99.660 81386202 37879 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:49:34] CVMFS is ok
[2026-01-09 17:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:49:34] Further information can be found at the LHC@home message board.
[2026-01-09 17:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:49:34] Checking for apptainer binary...
[2026-01-09 17:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:49:34] Running /usr/bin/apptainer --version
[2026-01-09 17:49:34] apptainer version 1.4.5-2.el9
[2026-01-09 17:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:49:34] c-212-19.aglt2.org
[2026-01-09 17:49:34] apptainer works
[2026-01-09 17:49:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:49:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:49:34] Starting ATLAS job with PandaID=6963635746
[2026-01-09 17:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:13:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:13:20] 2026-01-10 03:12:40,693 | INFO     | monitor loop #1009: job 0:6963635746 is in state 'finished'
[2026-01-09 22:13:20] 2026-01-10 03:12:40,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:13:20] 2026-01-10 03:12:41,439 | INFO     | time since job start (15775s) is within the limit (349056.0s)
[2026-01-09 22:13:20] 2026-01-10 03:12:43,200 | INFO     | monitor loop #1010: job 0:6963635746 is in state 'finished'
[2026-01-09 22:13:20] 2026-01-10 03:12:43,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:13:20] 2026-01-10 03:12:43,447 | INFO     | time since job start (15777s) is within the limit (349056.0s)
[2026-01-09 22:13:20] 2026-01-10 03:12:45,452 | INFO     | time since job start (15779s) is within the limit (349056.0s)
[2026-01-09 22:13:20] 2026-01-10 03:12:45,705 | INFO     | monitor loop #1011: job 0:6963635746 is in state 'finished'
[2026-01-09 22:13:20] 2026-01-10 03:12:45,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:13:20] 2026-01-10 03:12:46,960 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:13:20] 2026-01-10 03:12:46,972 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3188.4755312499988
[2026-01-09 22:13:20] 2026-01-10 03:12:46,988 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963635746/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:13:20] 2026-01-10 03:12:46,989 | INFO     | extracted standard info from prmon json
[2026-01-09 22:13:20] 2026-01-10 03:12:46,989 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:13:20] 2026-01-10 03:12:46,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:13:20] 2026-01-10 03:12:46,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:13:20] 2026-01-10 03:12:46,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:13:20] 2026-01-10 03:12:47,013 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:13:20] 2026-01-10 03:12:47,014 | INFO     | sum of square deviations: 5325245996.775222
[2026-01-09 22:13:20] 2026-01-10 03:12:47,016 | INFO     | sum of deviations: 45833079486.72868
[2026-01-09 22:13:20] 2026-01-10 03:12:47,016 | INFO     | mean x: 1768006864.7131784
[2026-01-09 22:13:20] 2026-01-10 03:12:47,016 | INFO     | mean y: 2505128.5503875967
[2026-01-09 22:13:20] 2026-01-10 03:12:47,016 | INFO     | intersect: -15214294097.72984
[2026-01-09 22:13:20] 2026-01-10 03:12:47,016 | INFO     | chi2: 1.2368925127890127
[2026-01-09 22:13:20] 2026-01-10 03:12:47,017 | INFO     | sum of square deviations: 5021619869.043458
[2026-01-09 22:13:20] 2026-01-10 03:12:47,018 | INFO     | sum of deviations: 44067268478.82603
[2026-01-09 22:13:20] 2026-01-10 03:12:47,018 | INFO     | mean x: 1768006712.2173913
[2026-01-09 22:13:20] 2026-01-10 03:12:47,018 | INFO     | mean y: 2504241.766798419
[2026-01-09 22:13:20] 2026-01-10 03:12:47,018 | INFO     | intersect: -15512653912.665785
[2026-01-09 22:13:20] 2026-01-10 03:12:47,019 | INFO     | chi2: 1.237326763395659
[2026-01-09 22:13:20] 2026-01-10 03:12:47,019 | INFO     | current chi2=1.237326763395659 (change=-0.03510819268096281 %)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,019 | INFO     | right removable region: 252
[2026-01-09 22:13:20] 2026-01-10 03:12:47,019 | INFO     | sum of square deviations: 5021586319.043458
[2026-01-09 22:13:20] 2026-01-10 03:12:47,020 | INFO     | sum of deviations: 11121903853.130434
[2026-01-09 22:13:20] 2026-01-10 03:12:47,020 | INFO     | mean x: 1768007017.2173913
[2026-01-09 22:13:20] 2026-01-10 03:12:47,021 | INFO     | mean y: 2522395.015810277
[2026-01-09 22:13:20] 2026-01-10 03:12:47,021 | INFO     | intersect: -3913292809.1520615
[2026-01-09 22:13:20] 2026-01-10 03:12:47,021 | INFO     | chi2: 0.012805080781229175
[2026-01-09 22:13:20] 2026-01-10 03:12:47,021 | INFO     | current chi2=0.012805080781229175 (change=98.96473778854433 %)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,021 | INFO     | sum of square deviations: 4729694303.80244
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | sum of deviations: 11597613169.758062
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | mean x: 1768007169.721774
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | mean y: 2522142.8225806453
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | intersect: -4332781984.403399
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | chi2: 0.011885350945382555
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | current chi2=0.011885350945382555 (change=7.182538334274644 %)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,023 | INFO     | left removable region: 20
[2026-01-09 22:13:20] 2026-01-10 03:12:47,024 | INFO     | sum of square deviations: 3872064375.4310284
[2026-01-09 22:13:20] 2026-01-10 03:12:47,024 | INFO     | sum of deviations: 14037194691.4569
[2026-01-09 22:13:20] 2026-01-10 03:12:47,024 | INFO     | mean x: 1768007291.7327585
[2026-01-09 22:13:20] 2026-01-10 03:12:47,024 | INFO     | mean y: 2519285.4267241377
[2026-01-09 22:13:20] 2026-01-10 03:12:47,024 | INFO     | intersect: -6406946096.25498
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | chi2: 0.0031834274989699586
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | current memory leak: 3.63 B/s (using 232 data points, chi2=0.00)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | could have reported an average CPU frequency of 3265 MHz (12 samples)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | ..............................
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . Timing measurements:
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . get job = 0 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . initial setup = 1 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . payload setup = 12 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . stage-in = 0 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . payload execution = 15733 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . stage-out = 1 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | . log creation = 0 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,025 | INFO     | ..............................
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | 
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | job summary report
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | --------------------------------------------------
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | PanDA job id: 6963635746
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | task id: 47898826
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | errors: (none)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | pilot state: finished 
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | transexitcode: 0
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | exeerrorcode: 0
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | exeerrordiag: 
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | exitcode: 0
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | exitmsg: OK
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | cpuconsumptiontime: 41829 s
[2026-01-09 22:13:20] 2026-01-10 03:12:47,093 | INFO     | nevents: 400
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | neventsw: 0
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | pid: 1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | pgrp: 1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | corecount: 8
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | event service: False
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | sizes: {0: 2283919, 1: 2283947, 5: 2284209, 11: 2284265, 15749: 2315833, 15751: 2324831, 15753: 2325015, 15762: 2325209}
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | --------------------------------------------------
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | 
[2026-01-09 22:13:20] 2026-01-10 03:12:47,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:13:20] 2026-01-10 03:12:47,114 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | job 6963635746 has completed (purged errors)
[2026-01-09 22:13:20] 2026-01-10 03:12:47,116 | INFO     | overall cleanup function is called
[2026-01-09 22:13:20] 2026-01-10 03:12:48,126 | INFO     | --- collectZombieJob: --- 10, [1031410]
[2026-01-09 22:13:20] 2026-01-10 03:12:48,126 | INFO     | zombie collector waiting for pid 1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:48,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:13:20] 2026-01-10 03:12:48,126 | INFO     | collected zombie processes
[2026-01-09 22:13:20] 2026-01-10 03:12:48,126 | INFO     | will attempt to kill all subprocesses of pid=1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:48,558 | INFO     | process IDs to be killed: [1031410] (in reverse order)
[2026-01-09 22:13:20] 2026-01-10 03:12:48,728 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:13:20] 2026-01-10 03:12:48,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:13:20] 2026-01-10 03:12:48,748 | INFO     | did not find any defunct processes belonging to 1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:48,766 | INFO     | did not find any defunct processes belonging to 1031410
[2026-01-09 22:13:20] 2026-01-10 03:12:48,766 | INFO     | ready for new job
[2026-01-09 22:13:20] 2026-01-10 03:12:48,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:13:20] 2026-01-10 03:12:48,768 | INFO     | ***************************************
[2026-01-09 22:13:20] 2026-01-10 03:12:48,769 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:13:20] 2026-01-10 03:12:48,769 | INFO     | ***************************************
[2026-01-09 22:13:20] 2026-01-10 03:12:48,769 | INFO     | 
[2026-01-09 22:13:20] 2026-01-10 03:12:48,773 | INFO     | architecture information:
[2026-01-09 22:13:20] 2026-01-10 03:12:48,774 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:13:20] 2026-01-10 03:12:48,787 | INFO     | cat /etc/os-release:
[2026-01-09 22:13:20] NAME="CentOS Linux"
[2026-01-09 22:13:20] VERSION="7 (Core)"
[2026-01-09 22:13:20] ID="centos"
[2026-01-09 22:13:20] ID_LIKE="rhel fedora"
[2026-01-09 22:13:20] VERSION_ID="7"
[2026-01-09 22:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:13:20] ANSI_COLOR="0;31"
[2026-01-09 22:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:13:20] HOME_URL="https://www.centos.org/"
[2026-01-09 22:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:13:20] 
[2026-01-09 22:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:13:20] 
[2026-01-09 22:13:20] 2026-01-10 03:12:48,787 | INFO     | ***************************************
[2026-01-09 22:13:20] 2026-01-10 03:12:49,293 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:13:20] 2026-01-10 03:12:49,310 | INFO     | sufficient remaining disk space (126568366080 B)
[2026-01-09 22:13:20] 2026-01-10 03:12:49,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:13:20] 2026-01-10 03:12:49,310 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | INFO     | update_server=False
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | INFO     | aborting loop
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:13:20] 2026-01-10 03:12:49,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:13:20] 2026-01-10 03:12:50,023 | INFO     | all data control threads have been joined
[2026-01-09 22:13:20] 2026-01-10 03:12:50,315 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:50,316 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:50,381 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:50,612 | INFO     | all job control threads have been joined
[2026-01-09 22:13:20] 2026-01-10 03:12:50,614 | INFO     | all payload control threads have been joined
[2026-01-09 22:13:20] 2026-01-10 03:12:50,623 | INFO     | [job] validate thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:50,725 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,029 | INFO     | [data] control thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,031 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,182 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,205 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,318 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,577 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,618 | INFO     | [job] control thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,619 | INFO     | [payload] control thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:51,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:52,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:13:20] 2026-01-10 03:12:53,113 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:12:53,320 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:13:20] 2026-01-10 03:13:13,568 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:13:20] 2026-01-10 03:13:14,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503815706432)>', '<ExcThread(monitor, started 140503278417664)>']
[2026-01-09 22:13:20] 2026-01-10 03:13:19,100 | INFO     | PID=993702 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:13:20] 2026-01-10 03:13:19,100 | INFO     | .. there are 25 such processes running
[2026-01-09 22:13:20] 2026-01-10 03:13:19,100 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:13:20] 2026-01-10 03:13:19,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:13:20] 2026-01-10 03:13:19,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:13:20] 2026-01-10 03:13:19,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:13:20] 2026-01-10 03:13:19,101 | INFO     | [monitor] control thread has ended
[2026-01-09 22:13:20] 2026-01-10 03:13:20,010 | INFO     | all workflow threads have been joined
[2026-01-09 22:13:20] 2026-01-10 03:13:20,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:13:20] 2026-01-10 03:13:20,011 | INFO     | traces error code: 0
[2026-01-09 22:13:20] 2026-01-10 03:13:20,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:13:20] 2026-01-10 03:13:20,131 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:13:20] 2026-01-10 03:13:20,133 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:13:20] 2026-01-10 03:13:20,135 [wrapper] pilotpid: 993702
[2026-01-09 22:13:20] 2026-01-10 03:13:20,137 [wrapper] Pilot exit status: 0
[2026-01-09 22:13:20] 2026-01-10 03:13:20,155 [wrapper] pandaids: 6963635746 6963635746
[2026-01-09 22:13:20] 2026-01-10 03:13:20,263 [wrapper] cleanup supervisor_pilot 2581141 993703
[2026-01-09 22:13:20] 2026-01-10 03:13:20,274 [wrapper] Test setup, not cleaning
[2026-01-09 22:13:20] 2026-01-10 03:13:20,293 [wrapper] apfmon messages muted
[2026-01-09 22:13:20] 2026-01-10 03:13:20,300 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:13:20] 2026-01-10 03:13:20,303 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:13:20]  *** Error codes and diagnostics ***
[2026-01-09 22:13:20]     "exeErrorCode": 0,
[2026-01-09 22:13:20]     "exeErrorDiag": "",
[2026-01-09 22:13:20]     "pilotErrorCode": 0,
[2026-01-09 22:13:20]     "pilotErrorDiag": "",
[2026-01-09 22:13:20]  *** Listing of results directory ***
[2026-01-09 22:13:20] total 658908
[2026-01-09 22:13:20] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 22:13:20] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:26 queuedata.json
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:13:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:54 run_atlas
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:54 job.xml
[2026-01-09 22:13:20] -rw-r--r--. 3 boincer umatlas 223844686 Jan  9 16:54 EVNT.47898824._000967.pool.root.1
[2026-01-09 22:13:20] -rw-r--r--. 3 boincer umatlas 223844686 Jan  9 16:54 ATLAS.root_0
[2026-01-09 22:13:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 22:13:20] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:54 shared
[2026-01-09 22:13:20] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 16:54 input.tar.gz
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:54 boinc_lockfile
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 17:49 pandaJob.out
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas        57 Jan  9 17:49 setup.sh.local
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas    989375 Jan  9 17:49 agis_schedconf.cvmfs.json
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas      6957 Jan  9 22:11 init_data.xml
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas 218010726 Jan  9 22:12 HITS.47898826._039701.pool.root.1
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:12 boinc_task_state.xml
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas        96 Jan  9 22:12 pilot_heartbeat.json
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas      1046 Jan  9 22:12 memory_monitor_summary.json
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas    485879 Jan  9 22:12 log.47898826._039701.job.log.tgz.1
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas      7799 Jan  9 22:12 heartbeat.json
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:13 boinc_mmap_file
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:13 wrapper_checkpoint.txt
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas      4824 Jan  9 22:13 pilotlog.txt
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas   2068018 Jan  9 22:13 log.47898826._039701.job.log.1
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas       357 Jan  9 22:13 output.list
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:13 runtime_log
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas   2570240 Jan  9 22:13 result.tar.gz
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas      9428 Jan  9 22:13 runtime_log.err
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas       784 Jan  9 22:13 iiqMDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmGmKDmoe7fwn.diag
[2026-01-09 22:13:20] -rw-r--r--. 1 boincer umatlas     23584 Jan  9 22:13 stderr.txt
[2026-01-09 22:13:20] HITS file was successfully produced:
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas 218010726 Jan  9 22:12 shared/HITS.pool.root.1
[2026-01-09 22:13:20]  *** Contents of shared directory: ***
[2026-01-09 22:13:20] total 434616
[2026-01-09 22:13:20] -rw-r--r--. 3 boincer umatlas 223844686 Jan  9 16:54 ATLAS.root_0
[2026-01-09 22:13:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 22:13:20] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 16:54 input.tar.gz
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas 218010726 Jan  9 22:12 HITS.pool.root.1
[2026-01-09 22:13:20] -rw-------. 1 boincer umatlas   2570240 Jan  9 22:13 result.tar.gz
22:13:21 (971526): run_atlas exited; CPU time 42468.967948
22:13:21 (971526): called boinc_finish(0)

</stderr_txt>
]]>

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