Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:34 (9589): wrapper (7.7.26015): starting
01:43:34 (9589): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 01:43:34] Arguments: --nthreads 8
[2026-01-10 01:43:34] Threads: 8
[2026-01-10 01:43:34] Checking for CVMFS
[2026-01-10 01:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:43:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:43:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:43:37] 2.11.2.0 23879 36150 125244 154962 3 61 20432630 25165825 899 130560 0 8119920 99.629 10108072 1787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 01:43:37] CVMFS is ok
[2026-01-10 01:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:43:37] Checking for apptainer binary...
[2026-01-10 01:43:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:43:38] Running /usr/bin/apptainer --version
[2026-01-10 01:43:38] apptainer version 1.3.2-1.el7
[2026-01-10 01:43:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:43:57] cg-vwn385.simple-grid.lan
[2026-01-10 01:43:57] apptainer works
[2026-01-10 01:43:57] Set ATHENA_PROC_NUMBER=8
[2026-01-10 01:43:57] Set ATHENA_CORE_NUMBER=8
[2026-01-10 01:43:57] Starting ATLAS job with PandaID=6963192138
[2026-01-10 01:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:49:55]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:49:55] 2026-01-10 06:49:10,135 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 07:49:55] 2026-01-10 06:49:10,136 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 07:49:55] 2026-01-10 06:49:10,138 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6963192138/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,138 | INFO     | extracted standard info from prmon json
[2026-01-10 07:49:55] 2026-01-10 06:49:10,139 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:49:55] 2026-01-10 06:49:10,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:49:55] 2026-01-10 06:49:10,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:49:55] 2026-01-10 06:49:10,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:49:55] 2026-01-10 06:49:10,147 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:49:55] 2026-01-10 06:49:10,148 | INFO     | sum of square deviations: 12733038740.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,152 | INFO     | sum of deviations: 186774824753.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,152 | INFO     | mean x: 1768017088.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,152 | INFO     | mean y: 2451435.5536231883
[2026-01-10 07:49:55] 2026-01-10 06:49:10,152 | INFO     | intersect: -25931741376.89276
[2026-01-10 07:49:55] 2026-01-10 06:49:10,153 | INFO     | chi2: 7.539815014201197
[2026-01-10 07:49:55] 2026-01-10 06:49:10,153 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,167 | INFO     | sum of deviations: 206890406518.5
[2026-01-10 07:49:55] 2026-01-10 06:49:10,167 | INFO     | mean x: 1768016935.5
[2026-01-10 07:49:55] 2026-01-10 06:49:10,167 | INFO     | mean y: 2456982.432352941
[2026-01-10 07:49:55] 2026-01-10 06:49:10,167 | INFO     | intersect: -30010954018.63035
[2026-01-10 07:49:55] 2026-01-10 06:49:10,168 | INFO     | chi2: 6.810895556737027
[2026-01-10 07:49:55] 2026-01-10 06:49:10,168 | INFO     | current chi2=6.810895556737027 (change=9.667603994146468 %)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,168 | INFO     | right removable region: 339
[2026-01-10 07:49:55] 2026-01-10 06:49:10,169 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,173 | INFO     | sum of deviations: 65114638551.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,173 | INFO     | mean x: 1768017240.5
[2026-01-10 07:49:55] 2026-01-10 06:49:10,173 | INFO     | mean y: 2485423.9
[2026-01-10 07:49:55] 2026-01-10 06:49:10,173 | INFO     | intersect: -9443640083.035097
[2026-01-10 07:49:55] 2026-01-10 06:49:10,174 | INFO     | chi2: 2.7097106714596135
[2026-01-10 07:49:55] 2026-01-10 06:49:10,174 | INFO     | current chi2=2.7097106714596135 (change=64.06131096909023 %)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,175 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,185 | INFO     | sum of deviations: -8677725007.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,186 | INFO     | mean x: 1768017393.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,186 | INFO     | mean y: 2506606.334328358
[2026-01-10 07:49:55] 2026-01-10 06:49:10,186 | INFO     | intersect: 1318590097.217339
[2026-01-10 07:49:55] 2026-01-10 06:49:10,187 | INFO     | chi2: 0.8470420897868407
[2026-01-10 07:49:55] 2026-01-10 06:49:10,187 | INFO     | current chi2=0.8470420897868407 (change=68.7404969575378 %)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,187 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 07:49:55] 2026-01-10 06:49:10,191 | INFO     | sum of deviations: -14148768647.000002
[2026-01-10 07:49:55] 2026-01-10 06:49:10,191 | INFO     | mean x: 1768017545.5
[2026-01-10 07:49:55] 2026-01-10 06:49:10,191 | INFO     | mean y: 2508210.4606060605
[2026-01-10 07:49:55] 2026-01-10 06:49:10,192 | INFO     | intersect: 2247366653.2414837
[2026-01-10 07:49:55] 2026-01-10 06:49:10,192 | INFO     | chi2: 0.8194137325846758
[2026-01-10 07:49:55] 2026-01-10 06:49:10,192 | INFO     | current chi2=0.8194137325846758 (change=3.261745494738952 %)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,192 | INFO     | left removable region: 30
[2026-01-10 07:49:55] 2026-01-10 06:49:10,193 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,196 | INFO     | sum of deviations: 7731644958.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,197 | INFO     | mean x: 1768017820.0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,197 | INFO     | mean y: 2515052.1909385114
[2026-01-10 07:49:55] 2026-01-10 06:49:10,197 | INFO     | intersect: -1491686650.5992358
[2026-01-10 07:49:55] 2026-01-10 06:49:10,206 | INFO     | chi2: 0.0018718667141157997
[2026-01-10 07:49:55] 2026-01-10 06:49:10,206 | INFO     | current memory leak: 0.85 B/s (using 309 data points, chi2=0.00)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | ..............................
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | . Timing measurements:
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | . get job = 0 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | . initial setup = 11 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,207 | INFO     | . payload setup = 138 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,208 | INFO     | . stage-in = 0 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,208 | INFO     | . payload execution = 21206 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,208 | INFO     | . stage-out = 3 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,208 | INFO     | . log creation = 1 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,208 | INFO     | ..............................
[2026-01-10 07:49:55] 2026-01-10 06:49:10,412 | INFO     | 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | job summary report
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | --------------------------------------------------
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | PanDA job id: 6963192138
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | task id: 47898826
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | errors: (none)
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | pilot state: finished 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | transexitcode: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,413 | INFO     | exeerrorcode: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | exeerrordiag: 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | exitcode: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | exitmsg: OK
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | cpuconsumptiontime: 80243 s
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | nevents: 400
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | neventsw: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | pid: 19787
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | pgrp: 19787
[2026-01-10 07:49:55] 2026-01-10 06:49:10,414 | INFO     | corecount: 8
[2026-01-10 07:49:55] 2026-01-10 06:49:10,415 | INFO     | event service: False
[2026-01-10 07:49:55] 2026-01-10 06:49:10,415 | INFO     | sizes: {0: 2283745, 1: 2284000, 12: 2284000, 23: 2284028, 33: 2284056, 44: 2284112, 55: 2284268, 66: 2284296, 76: 2284324, 87: 2284380, 98: 2284408, 103: 2284978, 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,415 | INFO     | --------------------------------------------------
[2026-01-10 07:49:55] 2026-01-10 06:49:10,415 | INFO     | 
[2026-01-10 07:49:55] 2026-01-10 06:49:10,415 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-10 07:49:55] 2026-01-10 06:49:11,046 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,046 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,046 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,046 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | job 6963192138 has completed (purged errors)
[2026-01-10 07:49:55] 2026-01-10 06:49:11,048 | INFO     | overall cleanup function is called
[2026-01-10 07:49:55] 2026-01-10 06:49:12,057 | INFO     | --- collectZombieJob: --- 10, [19787]
[2026-01-10 07:49:55] 2026-01-10 06:49:12,058 | INFO     | zombie collector waiting for pid 19787
[2026-01-10 07:49:55] 2026-01-10 06:49:12,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:49:55] 2026-01-10 06:49:12,058 | INFO     | collected zombie processes
[2026-01-10 07:49:55] 2026-01-10 06:49:12,058 | INFO     | will attempt to kill all subprocesses of pid=19787
[2026-01-10 07:49:55] 2026-01-10 06:49:12,140 | INFO     | process IDs to be killed: [19787] (in reverse order)
[2026-01-10 07:49:55] 2026-01-10 06:49:13,024 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:49:55] 2026-01-10 06:49:13,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:49:55] 2026-01-10 06:49:13,026 | INFO     | did not find any defunct processes belonging to 19787
[2026-01-10 07:49:55] 2026-01-10 06:49:13,028 | INFO     | did not find any defunct processes belonging to 19787
[2026-01-10 07:49:55] 2026-01-10 06:49:13,028 | INFO     | ready for new job
[2026-01-10 07:49:55] 2026-01-10 06:49:13,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:49:55] 2026-01-10 06:49:13,031 | INFO     | ***************************************
[2026-01-10 07:49:55] 2026-01-10 06:49:13,031 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:49:55] 2026-01-10 06:49:13,031 | INFO     | ***************************************
[2026-01-10 07:49:55] 2026-01-10 06:49:13,031 | INFO     | 
[2026-01-10 07:49:55] 2026-01-10 06:49:13,032 | INFO     | pilot is running in a VM
[2026-01-10 07:49:55] 2026-01-10 06:49:13,032 | INFO     | architecture information:
[2026-01-10 07:49:55] 2026-01-10 06:49:13,047 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:49:55] 2026-01-10 06:49:13,324 | INFO     | cat /etc/os-release:
[2026-01-10 07:49:55] NAME="CentOS Linux"
[2026-01-10 07:49:55] VERSION="7 (Core)"
[2026-01-10 07:49:55] ID="centos"
[2026-01-10 07:49:55] ID_LIKE="rhel fedora"
[2026-01-10 07:49:55] VERSION_ID="7"
[2026-01-10 07:49:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:49:55] ANSI_COLOR="0;31"
[2026-01-10 07:49:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:49:55] HOME_URL="https://www.centos.org/"
[2026-01-10 07:49:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:49:55] 
[2026-01-10 07:49:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:49:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:49:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:49:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:49:55] 
[2026-01-10 07:49:55] 2026-01-10 06:49:13,324 | INFO     | ***************************************
[2026-01-10 07:49:55] 2026-01-10 06:49:13,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-10 07:49:55] 2026-01-10 06:49:14,082 | INFO     | sufficient remaining disk space (496912826368 B)
[2026-01-10 07:49:55] 2026-01-10 06:49:14,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:49:55] 2026-01-10 06:49:14,082 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:49:55] 2026-01-10 06:49:14,083 | INFO     | update_server=False
[2026-01-10 07:49:55] 2026-01-10 06:49:14,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:49:55] 2026-01-10 06:49:14,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:49:55] 2026-01-10 06:49:14,357 | INFO     | aborting loop
[2026-01-10 07:49:55] 2026-01-10 06:49:14,370 | INFO     | all data control threads have been joined
[2026-01-10 07:49:55] 2026-01-10 06:49:14,406 | INFO     | all payload control threads have been joined
[2026-01-10 07:49:55] 2026-01-10 06:49:14,808 | INFO     | all job control threads have been joined
[2026-01-10 07:49:55] 2026-01-10 06:49:15,088 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,362 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,376 | INFO     | [data] control thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:49:55] 2026-01-10 06:49:15,412 | INFO     | [payload] control thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,434 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:49:55] 2026-01-10 06:49:15,618 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,796 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,814 | INFO     | [job] control thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:15,941 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:16,181 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:16,205 | INFO     | [job] validate thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:16,416 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:16,430 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:16,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:49:55] 2026-01-10 06:49:17,458 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:20,521 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:24,369 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:49:55] 2026-01-10 06:49:25,375 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:49:55] 2026-01-10 06:49:42,727 | INFO     | PID=13316 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 07:49:55] 2026-01-10 06:49:42,727 | INFO     | .. there are 2 such processes running
[2026-01-10 07:49:55] 2026-01-10 06:49:42,729 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:49:55] 2026-01-10 06:49:42,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:49:55] 2026-01-10 06:49:42,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:49:55] 2026-01-10 06:49:43,295 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:49:55] 2026-01-10 06:49:44,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567944542016)>', '<ExcThread(monitor, started 140567207986944)>']
[2026-01-10 07:49:55] 2026-01-10 06:49:45,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:49:55] 2026-01-10 06:49:45,748 | INFO     | [monitor] control thread has ended
[2026-01-10 07:49:55] 2026-01-10 06:49:49,973 | INFO     | all workflow threads have been joined
[2026-01-10 07:49:55] 2026-01-10 06:49:49,974 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:49:55] 2026-01-10 06:49:49,974 | INFO     | traces error code: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:49,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:49:55] 2026-01-10 06:49:50,458 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:49:55] 2026-01-10 06:49:50,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:49:55] 2026-01-10 06:49:50,648 [wrapper] pilotpid: 13316
[2026-01-10 07:49:55] 2026-01-10 06:49:50,744 [wrapper] Pilot exit status: 0
[2026-01-10 07:49:55] 2026-01-10 06:49:51,245 [wrapper] pandaids: 6963192138
[2026-01-10 07:49:55] 2026-01-10 06:49:52,221 [wrapper] cleanup supervisor_pilot 19980 13317
[2026-01-10 07:49:55] 2026-01-10 06:49:52,275 [wrapper] Test setup, not cleaning
[2026-01-10 07:49:55] 2026-01-10 06:49:52,379 [wrapper] apfmon messages muted
[2026-01-10 07:49:55] 2026-01-10 06:49:52,479 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:49:55] 2026-01-10 06:49:52,582 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:49:55]  *** Error codes and diagnostics ***
[2026-01-10 07:49:55]     "exeErrorCode": 0,
[2026-01-10 07:49:55]     "exeErrorDiag": "",
[2026-01-10 07:49:55]     "pilotErrorCode": 0,
[2026-01-10 07:49:55]     "pilotErrorDiag": "",
[2026-01-10 07:49:55]  *** Listing of results directory ***
[2026-01-10 07:49:55] total 443904
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 07:49:55] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc       100 Jan 10 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:49:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 01:43 run_atlas
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc       105 Jan 10 01:43 job.xml
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc      6391 Jan 10 01:43 init_data.xml
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc 222638363 Jan 10 01:43 EVNT.47898824._001499.pool.root.1
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc     15847 Jan 10 01:43 start_atlas.sh
[2026-01-10 07:49:55] drwxrwx--x. 2 boinc boinc        68 Jan 10 01:43 shared
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc    592398 Jan 10 01:43 input.tar.gz
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc         0 Jan 10 01:43 boinc_lockfile
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc      2520 Jan 10 01:43 pandaJob.out
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc    989374 Jan 10 01:47 agis_schedconf.cvmfs.json
[2026-01-10 07:49:55] drwx------. 5 boinc boinc      4096 Jan 10 01:48 pilot3
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc 221116462 Jan 10 07:45 HITS.47898826._039006.pool.root.1
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc       531 Jan 10 07:46 boinc_task_state.xml
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc      1012 Jan 10 07:47 memory_monitor_summary.json
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc   1516240 Jan 10 07:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc    546596 Jan 10 07:47 log.47898826._039006.job.log.tgz.1
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc      7775 Jan 10 07:49 heartbeat.json
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc      8192 Jan 10 07:49 boinc_mmap_file
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc        28 Jan 10 07:49 wrapper_checkpoint.txt
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc        95 Jan 10 07:49 pilot_heartbeat.json
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc      4957 Jan 10 07:49 pilotlog.txt
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc   2903804 Jan 10 07:49 log.47898826._039006.job.log.1
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc       357 Jan 10 07:49 output.list
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc       620 Jan 10 07:49 runtime_log
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc   3471360 Jan 10 07:49 result.tar.gz
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc      8833 Jan 10 07:49 runtime_log.err
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc       657 Jan 10 07:49 A8iKDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmINmKDmvjzqDo.diag
[2026-01-10 07:49:55] -rw-r--r--. 1 boinc boinc     20732 Jan 10 07:49 stderr.txt
[2026-01-10 07:49:55] HITS file was successfully produced:
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc 221116462 Jan 10 07:45 shared/HITS.pool.root.1
[2026-01-10 07:49:55]  *** Contents of shared directory: ***
[2026-01-10 07:49:55] total 437348
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc 222638363 Jan 10 01:43 ATLAS.root_0
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc     15847 Jan 10 01:43 start_atlas.sh
[2026-01-10 07:49:55] -rw-r--r--. 2 boinc boinc    592398 Jan 10 01:43 input.tar.gz
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc 221116462 Jan 10 07:45 HITS.pool.root.1
[2026-01-10 07:49:55] -rw-------. 1 boinc boinc   3471360 Jan 10 07:49 result.tar.gz
07:49:57 (9589): run_atlas exited; CPU time 80460.995186
07:49:57 (9589): called boinc_finish(0)

</stderr_txt>
]]>

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