Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:06 (22267): wrapper (7.7.26015): starting
05:04:06 (22267): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 05:04:06] Arguments: --nthreads 8
[2026-01-10 05:04:06] Threads: 8
[2026-01-10 05:04:06] Checking for CVMFS
[2026-01-10 05:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:04:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:04:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:04:09] 2.11.2.0 3545 36348 116940 154966 0 101 23128741 25165824 1088 130560 0 18128648 99.833 9899100 2990 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 05:04:09] CVMFS is ok
[2026-01-10 05:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:04:09] Checking for apptainer binary...
[2026-01-10 05:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:04:09] Running /usr/bin/apptainer --version
[2026-01-10 05:04:10] apptainer version 1.3.2-1.el7
[2026-01-10 05:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:04:25] cg-vwn466.simple-grid.lan
[2026-01-10 05:04:25] apptainer works
[2026-01-10 05:04:25] Set ATHENA_PROC_NUMBER=8
[2026-01-10 05:04:25] Set ATHENA_CORE_NUMBER=8
[2026-01-10 05:04:25] Starting ATLAS job with PandaID=6963189000
[2026-01-10 05:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:42:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:42:17] 2026-01-10 08:41:07,900 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 09:42:17] 2026-01-10 08:41:07,901 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6963189000/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:42:17] 2026-01-10 08:41:07,902 | INFO     | extracted standard info from prmon json
[2026-01-10 09:42:17] 2026-01-10 08:41:07,902 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:42:17] 2026-01-10 08:41:07,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:42:17] 2026-01-10 08:41:07,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 09:42:17] 2026-01-10 08:41:07,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 09:42:17] 2026-01-10 08:41:07,908 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:42:17] 2026-01-10 08:41:07,909 | INFO     | sum of square deviations: 5263458688.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,005 | INFO     | PID=26009 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,006 | INFO     | .. there are 2 such processes running
[2026-01-10 09:42:17] 2026-01-10 08:41:08,009 | INFO     | sum of deviations: 40266397985.00001
[2026-01-10 09:42:17] 2026-01-10 08:41:08,009 | INFO     | mean x: 1768026484.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,009 | INFO     | mean y: 2489720.521400778
[2026-01-10 09:42:17] 2026-01-10 08:41:08,010 | INFO     | intersect: -13523228304.980133
[2026-01-10 09:42:17] 2026-01-10 08:41:08,010 | INFO     | chi2: 6.368120650518599
[2026-01-10 09:42:17] 2026-01-10 08:41:08,011 | INFO     | sum of square deviations: 4962187923.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,013 | INFO     | sum of deviations: 56872732588.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,013 | INFO     | mean x: 1768026331.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,013 | INFO     | mean y: 2497989.8055555555
[2026-01-10 09:42:17] 2026-01-10 08:41:08,013 | INFO     | intersect: -20261242586.15291
[2026-01-10 09:42:17] 2026-01-10 08:41:08,013 | INFO     | chi2: 5.645603294061645
[2026-01-10 09:42:17] 2026-01-10 08:41:08,014 | INFO     | current chi2=5.645603294061645 (change=11.345849051998018 %)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,014 | INFO     | right removable region: 251
[2026-01-10 09:42:17] 2026-01-10 08:41:08,014 | INFO     | sum of square deviations: 4962187923.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,016 | INFO     | sum of deviations: -46809181185.99999
[2026-01-10 09:42:17] 2026-01-10 08:41:08,016 | INFO     | mean x: 1768026636.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,017 | INFO     | mean y: 2533755.380952381
[2026-01-10 09:42:17] 2026-01-10 08:41:08,017 | INFO     | intersect: 16680636329.047356
[2026-01-10 09:42:17] 2026-01-10 08:41:08,017 | INFO     | chi2: 1.956000106918916
[2026-01-10 09:42:17] 2026-01-10 08:41:08,017 | INFO     | current chi2=1.956000106918916 (change=69.28449986638326 %)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,018 | INFO     | sum of square deviations: 4672638308.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,020 | INFO     | sum of deviations: -80369246186.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,020 | INFO     | mean x: 1768026789.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,020 | INFO     | mean y: 2551314.3441295545
[2026-01-10 09:42:17] 2026-01-10 08:41:08,020 | INFO     | intersect: 30412561869.902
[2026-01-10 09:42:17] 2026-01-10 08:41:08,020 | INFO     | chi2: 1.039405221681097
[2026-01-10 09:42:17] 2026-01-10 08:41:08,021 | INFO     | current chi2=1.039405221681097 (change=46.860676642888116 %)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,021 | INFO     | sum of square deviations: 4394577280.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,033 | INFO     | sum of deviations: -79117810842.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,033 | INFO     | mean x: 1768026941.5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,033 | INFO     | mean y: 2550598.6652892563
[2026-01-10 09:42:17] 2026-01-10 08:41:08,033 | INFO     | intersect: 31833239239.12663
[2026-01-10 09:42:17] 2026-01-10 08:41:08,034 | INFO     | chi2: 1.0213577248629724
[2026-01-10 09:42:17] 2026-01-10 08:41:08,034 | INFO     | current chi2=1.0213577248629724 (change=1.7363292430776118 %)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,034 | INFO     | left removable region: 30
[2026-01-10 09:42:17] 2026-01-10 08:41:08,034 | INFO     | sum of square deviations: 3346927870.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,036 | INFO     | sum of deviations: -40147460795.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,036 | INFO     | mean x: 1768027216.0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,036 | INFO     | mean y: 2547755.108597285
[2026-01-10 09:42:17] 2026-01-10 08:41:08,037 | INFO     | intersect: 21210594685.27832
[2026-01-10 09:42:17] 2026-01-10 08:41:08,037 | INFO     | chi2: 0.20495202037531948
[2026-01-10 09:42:17] 2026-01-10 08:41:08,037 | INFO     | current memory leak: -12.00 B/s (using 221 data points, chi2=0.20)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | ..............................
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | . Timing measurements:
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | . get job = 0 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | . initial setup = 8 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | . payload setup = 155 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,038 | INFO     | . stage-in = 0 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,039 | INFO     | . payload execution = 15851 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,039 | INFO     | . stage-out = 3 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,039 | INFO     | . log creation = 1 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,039 | INFO     | ..............................
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | job summary report
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | --------------------------------------------------
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | PanDA job id: 6963189000
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | task id: 47898826
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | errors: (none)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | pilot state: finished 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | transexitcode: 0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | exeerrorcode: 0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | exeerrordiag: 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | exitcode: 0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | exitmsg: OK
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | cpuconsumptiontime: 74179 s
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | nevents: 400
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | neventsw: 0
[2026-01-10 09:42:17] 2026-01-10 08:41:08,148 | INFO     | pid: 32517
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | pgrp: 32517
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | corecount: 8
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | event service: False
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 23: 2284083, 34: 2284111, 45: 2284267, 55: 2284295, 66: 2284323, 77: 2284351, 88: 2284407, 98: 2284715, 10
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | --------------------------------------------------
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | 
[2026-01-10 09:42:17] 2026-01-10 08:41:08,149 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-10 09:42:17] 2026-01-10 08:41:08,633 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,633 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,633 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,633 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | job 6963189000 has completed (purged errors)
[2026-01-10 09:42:17] 2026-01-10 08:41:08,635 | INFO     | overall cleanup function is called
[2026-01-10 09:42:17] 2026-01-10 08:41:09,644 | INFO     | --- collectZombieJob: --- 10, [32517]
[2026-01-10 09:42:17] 2026-01-10 08:41:09,645 | INFO     | zombie collector waiting for pid 32517
[2026-01-10 09:42:17] 2026-01-10 08:41:09,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:42:17] 2026-01-10 08:41:09,645 | INFO     | collected zombie processes
[2026-01-10 09:42:17] 2026-01-10 08:41:09,645 | INFO     | will attempt to kill all subprocesses of pid=32517
[2026-01-10 09:42:17] 2026-01-10 08:41:09,712 | INFO     | process IDs to be killed: [32517] (in reverse order)
[2026-01-10 09:42:17] 2026-01-10 08:41:10,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:42:17] 2026-01-10 08:41:10,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:42:17] 2026-01-10 08:41:10,819 | INFO     | did not find any defunct processes belonging to 32517
[2026-01-10 09:42:17] 2026-01-10 08:41:10,821 | INFO     | did not find any defunct processes belonging to 32517
[2026-01-10 09:42:17] 2026-01-10 08:41:10,821 | INFO     | ready for new job
[2026-01-10 09:42:17] 2026-01-10 08:41:10,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:42:17] 2026-01-10 08:41:10,823 | INFO     | ***************************************
[2026-01-10 09:42:17] 2026-01-10 08:41:10,823 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:42:17] 2026-01-10 08:41:10,824 | INFO     | ***************************************
[2026-01-10 09:42:17] 2026-01-10 08:41:10,824 | INFO     | 
[2026-01-10 09:42:17] 2026-01-10 08:41:10,824 | INFO     | pilot is running in a VM
[2026-01-10 09:42:17] 2026-01-10 08:41:10,824 | INFO     | architecture information:
[2026-01-10 09:42:17] 2026-01-10 08:41:10,832 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:42:17] 2026-01-10 08:41:11,182 | INFO     | cat /etc/os-release:
[2026-01-10 09:42:17] NAME="CentOS Linux"
[2026-01-10 09:42:17] VERSION="7 (Core)"
[2026-01-10 09:42:17] ID="centos"
[2026-01-10 09:42:17] ID_LIKE="rhel fedora"
[2026-01-10 09:42:17] VERSION_ID="7"
[2026-01-10 09:42:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:42:17] ANSI_COLOR="0;31"
[2026-01-10 09:42:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:42:17] HOME_URL="https://www.centos.org/"
[2026-01-10 09:42:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:42:17] 
[2026-01-10 09:42:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:42:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:42:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:42:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:42:17] 
[2026-01-10 09:42:17] 2026-01-10 08:41:11,182 | INFO     | ***************************************
[2026-01-10 09:42:17] 2026-01-10 08:41:11,686 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-10 09:42:17] 2026-01-10 08:41:11,952 | INFO     | sufficient remaining disk space (497777901568 B)
[2026-01-10 09:42:17] 2026-01-10 08:41:11,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:42:17] 2026-01-10 08:41:11,953 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:42:17] 2026-01-10 08:41:11,953 | INFO     | update_server=False
[2026-01-10 09:42:17] 2026-01-10 08:41:11,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:42:17] 2026-01-10 08:41:11,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:42:17] 2026-01-10 08:41:11,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:42:17] 2026-01-10 08:41:11,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:42:17] 2026-01-10 08:41:11,961 | INFO     | aborting loop
[2026-01-10 09:42:17] 2026-01-10 08:41:12,712 | INFO     | all data control threads have been joined
[2026-01-10 09:42:17] 2026-01-10 08:41:12,959 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:12,966 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,150 | INFO     | all payload control threads have been joined
[2026-01-10 09:42:17] 2026-01-10 08:41:13,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:42:17] 2026-01-10 08:41:13,179 | INFO     | [job] validate thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,289 | INFO     | all job control threads have been joined
[2026-01-10 09:42:17] 2026-01-10 08:41:13,718 | INFO     | [data] control thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,743 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,826 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,897 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,920 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:13,961 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:14,156 | INFO     | [payload] control thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:14,167 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:14,295 | INFO     | [job] control thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:14,341 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:14,356 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:15,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:42:17] 2026-01-10 08:41:40,139 | INFO     | PID=26009 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:42:17] 2026-01-10 08:41:40,139 | INFO     | .. there are 2 such processes running
[2026-01-10 09:42:17] 2026-01-10 08:41:40,140 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:42:17] 2026-01-10 08:41:40,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:42:17] 2026-01-10 08:41:40,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:42:17] 2026-01-10 08:42:05,720 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:42:17] 2026-01-10 08:42:06,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607129777984)>', '<ExcThread(monitor, started 140606382778112)>']
[2026-01-10 09:42:17] 2026-01-10 08:42:07,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:42:17] 2026-01-10 08:42:07,306 | INFO     | [monitor] control thread has ended
[2026-01-10 09:42:17] 2026-01-10 08:42:11,354 | INFO     | all workflow threads have been joined
[2026-01-10 09:42:17] 2026-01-10 08:42:11,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:42:17] 2026-01-10 08:42:11,355 | INFO     | traces error code: 0
[2026-01-10 09:42:17] 2026-01-10 08:42:11,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:42:17] 2026-01-10 08:42:11,919 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:42:17] 2026-01-10 08:42:12,011 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:42:17] 2026-01-10 08:42:12,094 [wrapper] pilotpid: 26009
[2026-01-10 09:42:17] 2026-01-10 08:42:12,179 [wrapper] Pilot exit status: 0
[2026-01-10 09:42:17] 2026-01-10 08:42:12,701 [wrapper] pandaids: 6963189000
[2026-01-10 09:42:17] 2026-01-10 08:42:13,634 [wrapper] cleanup supervisor_pilot 10013 26010
[2026-01-10 09:42:17] 2026-01-10 08:42:13,759 [wrapper] Test setup, not cleaning
[2026-01-10 09:42:17] 2026-01-10 08:42:13,841 [wrapper] apfmon messages muted
[2026-01-10 09:42:17] 2026-01-10 08:42:13,936 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:42:17] 2026-01-10 08:42:13,996 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:42:17]  *** Error codes and diagnostics ***
[2026-01-10 09:42:17]     "exeErrorCode": 0,
[2026-01-10 09:42:17]     "exeErrorDiag": "",
[2026-01-10 09:42:17]     "pilotErrorCode": 0,
[2026-01-10 09:42:17]     "pilotErrorDiag": "",
[2026-01-10 09:42:17]  *** Listing of results directory ***
[2026-01-10 09:42:17] total 443272
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 09:42:17] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc       100 Jan 10 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:42:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 05:04 run_atlas
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc       105 Jan 10 05:04 job.xml
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc 223026203 Jan 10 05:04 EVNT.47898824._001456.pool.root.1
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:04 start_atlas.sh
[2026-01-10 09:42:17] drwxrwx--x. 2 boinc boinc        68 Jan 10 05:04 shared
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc    592403 Jan 10 05:04 input.tar.gz
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc      6392 Jan 10 05:04 init_data.xml
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc         0 Jan 10 05:04 boinc_lockfile
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc      2520 Jan 10 05:04 pandaJob.out
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc    989374 Jan 10 05:08 agis_schedconf.cvmfs.json
[2026-01-10 09:42:17] drwx------. 5 boinc boinc      4096 Jan 10 05:08 pilot3
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc 221646445 Jan 10 09:37 HITS.47898826._037937.pool.root.1
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc       531 Jan 10 09:38 boinc_task_state.xml
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc      1022 Jan 10 09:39 memory_monitor_summary.json
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc   1516240 Jan 10 09:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc    483240 Jan 10 09:39 log.47898826._037937.job.log.tgz.1
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc      7792 Jan 10 09:41 heartbeat.json
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc        95 Jan 10 09:41 pilot_heartbeat.json
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc      8192 Jan 10 09:42 boinc_mmap_file
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc        28 Jan 10 09:42 wrapper_checkpoint.txt
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc      4884 Jan 10 09:42 pilotlog.txt
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc   2186792 Jan 10 09:42 log.47898826._037937.job.log.1
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc       357 Jan 10 09:42 output.list
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc       620 Jan 10 09:42 runtime_log
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc   2693120 Jan 10 09:42 result.tar.gz
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc       657 Jan 10 09:42 XLNMDmLFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmo9gKDmZdPLDn.diag
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc      8817 Jan 10 09:42 runtime_log.err
[2026-01-10 09:42:17] -rw-r--r--. 1 boinc boinc     20803 Jan 10 09:42 stderr.txt
[2026-01-10 09:42:17] HITS file was successfully produced:
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc 221646445 Jan 10 09:37 shared/HITS.pool.root.1
[2026-01-10 09:42:17]  *** Contents of shared directory: ***
[2026-01-10 09:42:17] total 437480
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc 223026203 Jan 10 05:04 ATLAS.root_0
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 05:04 start_atlas.sh
[2026-01-10 09:42:17] -rw-r--r--. 2 boinc boinc    592403 Jan 10 05:04 input.tar.gz
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc 221646445 Jan 10 09:37 HITS.pool.root.1
[2026-01-10 09:42:17] -rw-------. 1 boinc boinc   2693120 Jan 10 09:42 result.tar.gz
09:42:18 (22267): run_atlas exited; CPU time 74325.700923
09:42:18 (22267): called boinc_finish(0)

</stderr_txt>
]]>

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