Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:53:26 (3749): wrapper (7.7.26015): starting
03:53:26 (3749): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 03:53:26] Arguments: --nthreads 8
[2026-01-10 03:53:26] Threads: 8
[2026-01-10 03:53:26] Checking for CVMFS
[2026-01-10 03:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:53:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:53:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:53:29] 2.11.2.0 11275 36281 131008 154964 0 63 21929885 25165825 899 130560 0 15912162 99.846 13138884 3167 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 03:53:29] CVMFS is ok
[2026-01-10 03:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:53:29] Checking for apptainer binary...
[2026-01-10 03:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:53:29] Running /usr/bin/apptainer --version
[2026-01-10 03:53:29] apptainer version 1.3.2-1.el7
[2026-01-10 03:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:53:56] cg-vwn441.simple-grid.lan
[2026-01-10 03:53:56] apptainer works
[2026-01-10 03:53:56] Set ATHENA_PROC_NUMBER=8
[2026-01-10 03:53:56] Set ATHENA_CORE_NUMBER=8
[2026-01-10 03:53:56] Starting ATLAS job with PandaID=6963189588
[2026-01-10 03:53:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:56:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:56:45] 2026-01-10 08:55:52,031 | INFO     | time since job start (21474s) is within the limit (349056.0s)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,607 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:56:45] 2026-01-10 08:55:52,608 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 09:56:45] 2026-01-10 08:55:52,610 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963189588/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,611 | INFO     | extracted standard info from prmon json
[2026-01-10 09:56:45] 2026-01-10 08:55:52,611 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:56:45] 2026-01-10 08:55:52,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:56:45] 2026-01-10 08:55:52,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 09:56:45] 2026-01-10 08:55:52,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 09:56:45] 2026-01-10 08:55:52,624 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:56:45] 2026-01-10 08:55:52,625 | INFO     | sum of square deviations: 12403750705.5
[2026-01-10 09:56:45] 2026-01-10 08:55:52,629 | INFO     | sum of deviations: 144585164173.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,629 | INFO     | mean x: 1768024826.5
[2026-01-10 09:56:45] 2026-01-10 08:55:52,629 | INFO     | mean y: 2457706.50877193
[2026-01-10 09:56:45] 2026-01-10 08:55:52,630 | INFO     | intersect: -20606643997.550167
[2026-01-10 09:56:45] 2026-01-10 08:55:52,630 | INFO     | chi2: 8.025850895351878
[2026-01-10 09:56:45] 2026-01-10 08:55:52,631 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,640 | INFO     | sum of deviations: 164671452854.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,640 | INFO     | mean x: 1768024674.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,640 | INFO     | mean y: 2463344.3145400593
[2026-01-10 09:56:45] 2026-01-10 08:55:52,640 | INFO     | intersect: -24530066524.108303
[2026-01-10 09:56:45] 2026-01-10 08:55:52,641 | INFO     | chi2: 7.308186892742285
[2026-01-10 09:56:45] 2026-01-10 08:55:52,641 | INFO     | current chi2=7.308186892742285 (change=8.941905499705012 %)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,641 | INFO     | right removable region: 336
[2026-01-10 09:56:45] 2026-01-10 08:55:52,642 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,646 | INFO     | sum of deviations: 25462312742.99993
[2026-01-10 09:56:45] 2026-01-10 08:55:52,646 | INFO     | mean x: 1768024979.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,646 | INFO     | mean y: 2491573.0296735903
[2026-01-10 09:56:45] 2026-01-10 08:55:52,646 | INFO     | intersect: -3790849924.9598904
[2026-01-10 09:56:45] 2026-01-10 08:55:52,647 | INFO     | chi2: 3.2524121463477016
[2026-01-10 09:56:45] 2026-01-10 08:55:52,647 | INFO     | current chi2=3.2524121463477016 (change=59.475796538516356 %)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,648 | INFO     | sum of square deviations: 11347200663.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,651 | INFO     | sum of deviations: -55767017613.500015
[2026-01-10 09:56:45] 2026-01-10 08:55:52,652 | INFO     | mean x: 1768025131.5
[2026-01-10 09:56:45] 2026-01-10 08:55:52,652 | INFO     | mean y: 2515328.8222891567
[2026-01-10 09:56:45] 2026-01-10 08:55:52,652 | INFO     | intersect: 8691661804.478579
[2026-01-10 09:56:45] 2026-01-10 08:55:52,652 | INFO     | chi2: 1.007470864136644
[2026-01-10 09:56:45] 2026-01-10 08:55:52,653 | INFO     | current chi2=1.007470864136644 (change=69.02388692441748 %)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,653 | INFO     | sum of square deviations: 10842205148.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,657 | INFO     | sum of deviations: -72085379330.00002
[2026-01-10 09:56:45] 2026-01-10 08:55:52,657 | INFO     | mean x: 1768025284.0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,657 | INFO     | mean y: 2520240.2844036696
[2026-01-10 09:56:45] 2026-01-10 08:55:52,657 | INFO     | intersect: 11757395888.037733
[2026-01-10 09:56:45] 2026-01-10 08:55:52,658 | INFO     | chi2: 0.8874536272805013
[2026-01-10 09:56:45] 2026-01-10 08:55:52,658 | INFO     | current chi2=0.8874536272805013 (change=11.91272533315314 %)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,658 | INFO     | left removable region: 30
[2026-01-10 09:56:45] 2026-01-10 08:55:52,659 | INFO     | sum of square deviations: 8884603792.5
[2026-01-10 09:56:45] 2026-01-10 08:55:52,662 | INFO     | sum of deviations: -36420643468.99999
[2026-01-10 09:56:45] 2026-01-10 08:55:52,662 | INFO     | mean x: 1768025558.5
[2026-01-10 09:56:45] 2026-01-10 08:55:52,663 | INFO     | mean y: 2522728.2352941176
[2026-01-10 09:56:45] 2026-01-10 08:55:52,663 | INFO     | intersect: 7250187341.548223
[2026-01-10 09:56:45] 2026-01-10 08:55:52,663 | INFO     | chi2: 0.09888182692773208
[2026-01-10 09:56:45] 2026-01-10 08:55:52,664 | INFO     | current memory leak: -4.10 B/s (using 306 data points, chi2=0.10)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,664 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | ..............................
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . Timing measurements:
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . get job = 0 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . initial setup = 7 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . payload setup = 152 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . stage-in = 0 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . payload execution = 20990 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,665 | INFO     | . stage-out = 3 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,666 | INFO     | . log creation = 0 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,666 | INFO     | ..............................
[2026-01-10 09:56:45] 2026-01-10 08:55:52,801 | INFO     | 
[2026-01-10 09:56:45] 2026-01-10 08:55:52,801 | INFO     | job summary report
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | --------------------------------------------------
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | PanDA job id: 6963189588
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | task id: 47898826
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | errors: (none)
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | pilot state: finished 
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | transexitcode: 0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | exeerrorcode: 0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,802 | INFO     | exeerrordiag: 
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | exitcode: 0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | exitmsg: OK
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | cpuconsumptiontime: 78875 s
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | nevents: 400
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | neventsw: 0
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | pid: 14043
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | pgrp: 14043
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | corecount: 8
[2026-01-10 09:56:45] 2026-01-10 08:55:52,803 | INFO     | event service: False
[2026-01-10 09:56:45] 2026-01-10 08:55:52,804 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2283999, 12: 2284027, 23: 2284055, 34: 2284083, 45: 2284239, 55: 2284267, 66: 2284295, 77: 2284323, 88: 2284379, 98: 2284687, 10
[2026-01-10 09:56:45] 2026-01-10 08:55:52,804 | INFO     | --------------------------------------------------
[2026-01-10 09:56:45] 2026-01-10 08:55:52,804 | INFO     | 
[2026-01-10 09:56:45] 2026-01-10 08:55:52,804 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 09:56:45] 2026-01-10 08:55:53,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,293 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,293 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,293 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:56:45] 2026-01-10 08:55:53,295 | INFO     | job 6963189588 has completed (purged errors)
[2026-01-10 09:56:45] 2026-01-10 08:55:53,306 | INFO     | overall cleanup function is called
[2026-01-10 09:56:45] 2026-01-10 08:55:54,315 | INFO     | --- collectZombieJob: --- 10, [14043]
[2026-01-10 09:56:45] 2026-01-10 08:55:54,315 | INFO     | zombie collector waiting for pid 14043
[2026-01-10 09:56:45] 2026-01-10 08:55:54,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:56:45] 2026-01-10 08:55:54,315 | INFO     | collected zombie processes
[2026-01-10 09:56:45] 2026-01-10 08:55:54,315 | INFO     | will attempt to kill all subprocesses of pid=14043
[2026-01-10 09:56:45] 2026-01-10 08:55:54,419 | INFO     | process IDs to be killed: [14043] (in reverse order)
[2026-01-10 09:56:45] 2026-01-10 08:55:55,364 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:56:45] 2026-01-10 08:55:55,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:56:45] 2026-01-10 08:55:55,367 | INFO     | did not find any defunct processes belonging to 14043
[2026-01-10 09:56:45] 2026-01-10 08:55:55,378 | INFO     | did not find any defunct processes belonging to 14043
[2026-01-10 09:56:45] 2026-01-10 08:55:55,378 | INFO     | ready for new job
[2026-01-10 09:56:45] 2026-01-10 08:55:55,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:56:45] 2026-01-10 08:55:55,381 | INFO     | ***************************************
[2026-01-10 09:56:45] 2026-01-10 08:55:55,381 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:56:45] 2026-01-10 08:55:55,381 | INFO     | ***************************************
[2026-01-10 09:56:45] 2026-01-10 08:55:55,381 | INFO     | 
[2026-01-10 09:56:45] 2026-01-10 08:55:55,382 | INFO     | pilot is running in a VM
[2026-01-10 09:56:45] 2026-01-10 08:55:55,382 | INFO     | architecture information:
[2026-01-10 09:56:45] 2026-01-10 08:55:55,391 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:56:45] 2026-01-10 08:55:55,686 | INFO     | cat /etc/os-release:
[2026-01-10 09:56:45] NAME="CentOS Linux"
[2026-01-10 09:56:45] VERSION="7 (Core)"
[2026-01-10 09:56:45] ID="centos"
[2026-01-10 09:56:45] ID_LIKE="rhel fedora"
[2026-01-10 09:56:45] VERSION_ID="7"
[2026-01-10 09:56:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:56:45] ANSI_COLOR="0;31"
[2026-01-10 09:56:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:56:45] HOME_URL="https://www.centos.org/"
[2026-01-10 09:56:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:56:45] 
[2026-01-10 09:56:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:56:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:56:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:56:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:56:45] 
[2026-01-10 09:56:45] 2026-01-10 08:55:55,686 | INFO     | ***************************************
[2026-01-10 09:56:45] 2026-01-10 08:55:56,190 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 09:56:45] 2026-01-10 08:55:56,406 | INFO     | sufficient remaining disk space (496984129536 B)
[2026-01-10 09:56:45] 2026-01-10 08:55:56,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:56:45] 2026-01-10 08:55:56,406 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:56:45] 2026-01-10 08:55:56,406 | INFO     | update_server=False
[2026-01-10 09:56:45] 2026-01-10 08:55:56,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:56:45] 2026-01-10 08:55:56,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:56:45] 2026-01-10 08:55:56,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:56:45] 2026-01-10 08:55:56,906 | INFO     | aborting loop
[2026-01-10 09:56:45] 2026-01-10 08:55:56,947 | INFO     | all payload control threads have been joined
[2026-01-10 09:56:45] 2026-01-10 08:55:56,950 | INFO     | all data control threads have been joined
[2026-01-10 09:56:45] 2026-01-10 08:55:57,413 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,597 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,603 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,668 | INFO     | all job control threads have been joined
[2026-01-10 09:56:45] 2026-01-10 08:55:57,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,771 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:56:45] 2026-01-10 08:55:57,857 | INFO     | [job] validate thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,908 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,912 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,941 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,953 | INFO     | [payload] control thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:57,956 | INFO     | [data] control thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:58,087 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:58,415 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:58,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:56:45] 2026-01-10 08:55:58,674 | INFO     | [job] control thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:55:58,822 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:56:02,457 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:56:45] 2026-01-10 08:56:25,158 | INFO     | PID=7507 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 09:56:45] 2026-01-10 08:56:25,158 | INFO     | .. there are 2 such processes running
[2026-01-10 09:56:45] 2026-01-10 08:56:25,158 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:56:45] 2026-01-10 08:56:25,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:56:45] 2026-01-10 08:56:25,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:56:45] 2026-01-10 08:56:35,037 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:56:45] 2026-01-10 08:56:35,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713735259968)>', '<ExcThread(monitor, started 139713314801408)>']
[2026-01-10 09:56:45] 2026-01-10 08:56:36,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:56:45] 2026-01-10 08:56:36,224 | INFO     | [monitor] control thread has ended
[2026-01-10 09:56:45] 2026-01-10 08:56:40,455 | INFO     | all workflow threads have been joined
[2026-01-10 09:56:45] 2026-01-10 08:56:40,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:56:45] 2026-01-10 08:56:40,455 | INFO     | traces error code: 0
[2026-01-10 09:56:45] 2026-01-10 08:56:40,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:56:45] 2026-01-10 08:56:40,817 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:56:45] 2026-01-10 08:56:40,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:56:45] 2026-01-10 08:56:41,010 [wrapper] pilotpid: 7507
[2026-01-10 09:56:45] 2026-01-10 08:56:41,124 [wrapper] Pilot exit status: 0
[2026-01-10 09:56:45] 2026-01-10 08:56:41,553 [wrapper] pandaids: 6963189588
[2026-01-10 09:56:45] 2026-01-10 08:56:42,503 [wrapper] cleanup supervisor_pilot 13156 7508
[2026-01-10 09:56:45] 2026-01-10 08:56:42,614 [wrapper] Test setup, not cleaning
[2026-01-10 09:56:45] 2026-01-10 08:56:42,732 [wrapper] apfmon messages muted
[2026-01-10 09:56:45] 2026-01-10 08:56:42,742 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:56:45] 2026-01-10 08:56:42,844 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:56:45]  *** Error codes and diagnostics ***
[2026-01-10 09:56:45]     "exeErrorCode": 0,
[2026-01-10 09:56:45]     "exeErrorDiag": "",
[2026-01-10 09:56:45]     "pilotErrorCode": 0,
[2026-01-10 09:56:45]     "pilotErrorDiag": "",
[2026-01-10 09:56:45]  *** Listing of results directory ***
[2026-01-10 09:56:45] total 443200
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 09:56:45] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc       100 Jan 10 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:56:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 03:53 run_atlas
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc       105 Jan 10 03:53 job.xml
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc 225915674 Jan 10 03:53 EVNT.47898824._001477.pool.root.1
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc      6390 Jan 10 03:53 init_data.xml
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:53 start_atlas.sh
[2026-01-10 09:56:45] drwxrwx--x. 2 boinc boinc        68 Jan 10 03:53 shared
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc    592398 Jan 10 03:53 input.tar.gz
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc         0 Jan 10 03:53 boinc_lockfile
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc      2520 Jan 10 03:53 pandaJob.out
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc    989382 Jan 10 03:57 agis_schedconf.cvmfs.json
[2026-01-10 09:56:45] drwx------. 5 boinc boinc      4096 Jan 10 03:57 pilot3
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc 217240431 Jan 10 09:52 HITS.47898826._038457.pool.root.1
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc       531 Jan 10 09:53 boinc_task_state.xml
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc      1012 Jan 10 09:54 memory_monitor_summary.json
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc   1516240 Jan 10 09:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc    540318 Jan 10 09:54 log.47898826._038457.job.log.tgz.1
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc        95 Jan 10 09:55 pilot_heartbeat.json
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc      7777 Jan 10 09:55 heartbeat.json
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc      8192 Jan 10 09:56 boinc_mmap_file
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc        28 Jan 10 09:56 wrapper_checkpoint.txt
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc      4883 Jan 10 09:56 pilotlog.txt
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc   2850378 Jan 10 09:56 log.47898826._038457.job.log.1
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc       357 Jan 10 09:56 output.list
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc       620 Jan 10 09:56 runtime_log
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc   3409920 Jan 10 09:56 result.tar.gz
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc      8817 Jan 10 09:56 runtime_log.err
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc       657 Jan 10 09:56 EejLDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpMmKDmT4tQIn.diag
[2026-01-10 09:56:45] -rw-r--r--. 1 boinc boinc     20777 Jan 10 09:56 stderr.txt
[2026-01-10 09:56:45] HITS file was successfully produced:
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc 217240431 Jan 10 09:52 shared/HITS.pool.root.1
[2026-01-10 09:56:45]  *** Contents of shared directory: ***
[2026-01-10 09:56:45] total 436704
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc 225915674 Jan 10 03:53 ATLAS.root_0
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:53 start_atlas.sh
[2026-01-10 09:56:45] -rw-r--r--. 2 boinc boinc    592398 Jan 10 03:53 input.tar.gz
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc 217240431 Jan 10 09:52 HITS.pool.root.1
[2026-01-10 09:56:45] -rw-------. 1 boinc boinc   3409920 Jan 10 09:56 result.tar.gz
09:56:47 (3749): run_atlas exited; CPU time 79093.209394
09:56:47 (3749): called boinc_finish(0)

</stderr_txt>
]]>

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