Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
12:40:17 (702355): wrapper (7.7.26015): starting
12:40:17 (702355): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 12:40:17] Arguments: --nthreads 4
[2026-01-09 12:40:17] Threads: 4
[2026-01-09 12:40:17] Checking for CVMFS
[2026-01-09 12:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:40:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:40:17] 2.12.7.0 5258 906 62036 154956 3 97 5219878 6144000 2625 130560 0 1404437 99.993 31704 781 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 12:40:17] CVMFS is ok
[2026-01-09 12:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:40:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 12:40:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 12:40:18] Further information can be found at the LHC@home message board.
[2026-01-09 12:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:40:18] Checking for apptainer binary...
[2026-01-09 12:40:18] apptainer is not installed, using version from CVMFS
[2026-01-09 12:40:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:40:18] k8plus
[2026-01-09 12:40:18] apptainer works
[2026-01-09 12:40:18] Set ATHENA_PROC_NUMBER=4
[2026-01-09 12:40:18] Set ATHENA_CORE_NUMBER=4
[2026-01-09 12:40:18] Starting ATLAS job with PandaID=6963193776
[2026-01-09 12:40:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:54:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:54:46] 2026-01-09 22:53:50,976 | INFO     | monitor loop #606: job 0:6963193776 is in state 'finished'
[2026-01-09 14:54:46] 2026-01-09 22:53:50,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:54:46] 2026-01-09 22:53:51,616 | INFO     | time since job start (8004s) is within the limit (349056.0s)
[2026-01-09 14:54:46] 2026-01-09 22:53:53,479 | INFO     | monitor loop #607: job 0:6963193776 is in state 'finished'
[2026-01-09 14:54:46] 2026-01-09 22:53:53,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:54:46] 2026-01-09 22:53:53,621 | INFO     | time since job start (8006s) is within the limit (349056.0s)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,717 | INFO     | PID=706161 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:54:46] 2026-01-09 22:53:54,717 | INFO     | .. there are 3 such processes running
[2026-01-09 14:54:46] 2026-01-09 22:53:54,989 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:54:46] 2026-01-09 22:53:54,991 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3895.1331875000005
[2026-01-09 14:54:46] 2026-01-09 22:53:54,992 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6963193776/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,993 | INFO     | extracted standard info from prmon json
[2026-01-09 14:54:46] 2026-01-09 22:53:54,993 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:54:46] 2026-01-09 22:53:54,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:54:46] 2026-01-09 22:53:54,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:54:46] 2026-01-09 22:53:54,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:54:46] 2026-01-09 22:53:54,994 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:54:46] 2026-01-09 22:53:54,994 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | sum of deviations: -22461157334.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | mean x: 1767995215.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | mean y: 2454266.3129770993
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | intersect: 56972453301.93296
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | chi2: 1.3597242910632132
[2026-01-09 14:54:46] 2026-01-09 22:53:54,995 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | sum of deviations: -21314681244.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | mean x: 1767995062.5
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | mean y: 2456543.634920635
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | intersect: 60759577622.10267
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | chi2: 1.3504843015096382
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | current chi2=1.3504843015096382 (change=0.6795487595761069 %)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | right removable region: 125
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | sum of deviations: -31385270521.500008
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | mean x: 1767995367.5
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | mean y: 2471264.23015873
[2026-01-09 14:54:46] 2026-01-09 22:53:54,996 | INFO     | intersect: 89465644008.18486
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | chi2: 0.280101488972028
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | current chi2=0.280101488972028 (change=79.40012612755432 %)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | sum of deviations: -26232831620.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | mean x: 1767995520.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | mean y: 2460176.884297521
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | intersect: 84437256647.22333
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | chi2: 0.27431936600005724
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | current chi2=0.27431936600005724 (change=2.0642956926759526 %)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | left removable region: 20
[2026-01-09 14:54:46] 2026-01-09 22:53:54,997 | INFO     | sum of square deviations: 358927660.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | sum of deviations: -14333488846.999996
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | mean x: 1767995642.0
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | mean y: 2434958.5714285714
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | intersect: 70605925968.85355
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | chi2: 0.22661292705724131
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | current memory leak: -39.93 B/s (using 105 data points, chi2=0.23)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | could have reported an average CPU frequency of 3900 MHz (8 samples)
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | ..............................
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . Timing measurements:
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . get job = 0 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . initial setup = 3 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . payload setup = 4 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . stage-in = 0 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . payload execution = 7973 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . stage-out = 0 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,998 | INFO     | . log creation = 0 s
[2026-01-09 14:54:46] 2026-01-09 22:53:54,999 | INFO     | ..............................
[2026-01-09 14:54:46] 2026-01-09 22:53:55,449 | INFO     | 
[2026-01-09 14:54:46] 2026-01-09 22:53:55,449 | INFO     | job summary report
[2026-01-09 14:54:46] 2026-01-09 22:53:55,449 | INFO     | --------------------------------------------------
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | PanDA job id: 6963193776
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | task id: 47898826
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | errors: (none)
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | pilot state: finished 
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | transexitcode: 0
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | exeerrorcode: 0
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | exeerrordiag: 
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | exitcode: 0
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | exitmsg: OK
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | cpuconsumptiontime: 31103 s
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | nevents: 400
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | neventsw: 0
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | pid: 712774
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | pgrp: 712774
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | corecount: 4
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | event service: False
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | sizes: {0: 2283978, 3: 2284240, 11: 2284268, 7981: 2312139, 7982: 2321151, 7985: 2321207, 7993: 2321529}
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | --------------------------------------------------
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | 
[2026-01-09 14:54:46] 2026-01-09 22:53:55,450 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,464 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:54:46] 2026-01-09 22:53:55,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:54:46] 2026-01-09 22:53:55,465 | INFO     | job 6963193776 has completed (purged errors)
[2026-01-09 14:54:46] 2026-01-09 22:53:55,465 | INFO     | overall cleanup function is called
[2026-01-09 14:54:46] 2026-01-09 22:53:56,472 | INFO     | --- collectZombieJob: --- 10, [712774]
[2026-01-09 14:54:46] 2026-01-09 22:53:56,472 | INFO     | zombie collector waiting for pid 712774
[2026-01-09 14:54:46] 2026-01-09 22:53:56,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:54:46] 2026-01-09 22:53:56,472 | INFO     | collected zombie processes
[2026-01-09 14:54:46] 2026-01-09 22:53:56,472 | INFO     | will attempt to kill all subprocesses of pid=712774
[2026-01-09 14:54:46] 2026-01-09 22:53:56,549 | INFO     | process IDs to be killed: [712774] (in reverse order)
[2026-01-09 14:54:46] 2026-01-09 22:53:56,589 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:54:46] 2026-01-09 22:53:56,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:54:46] 2026-01-09 22:53:56,592 | INFO     | did not find any defunct processes belonging to 712774
[2026-01-09 14:54:46] 2026-01-09 22:53:56,595 | INFO     | did not find any defunct processes belonging to 712774
[2026-01-09 14:54:46] 2026-01-09 22:53:56,595 | INFO     | ready for new job
[2026-01-09 14:54:46] 2026-01-09 22:53:56,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:54:46] 2026-01-09 22:53:56,596 | INFO     | ***************************************
[2026-01-09 14:54:46] 2026-01-09 22:53:56,596 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:54:46] 2026-01-09 22:53:56,596 | INFO     | ***************************************
[2026-01-09 14:54:46] 2026-01-09 22:53:56,596 | INFO     | 
[2026-01-09 14:54:46] 2026-01-09 22:53:56,597 | INFO     | architecture information:
[2026-01-09 14:54:46] 2026-01-09 22:53:56,597 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:54:46] 2026-01-09 22:53:56,607 | INFO     | cat /etc/os-release:
[2026-01-09 14:54:46] NAME="CentOS Linux"
[2026-01-09 14:54:46] VERSION="7 (Core)"
[2026-01-09 14:54:46] ID="centos"
[2026-01-09 14:54:46] ID_LIKE="rhel fedora"
[2026-01-09 14:54:46] VERSION_ID="7"
[2026-01-09 14:54:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:54:46] ANSI_COLOR="0;31"
[2026-01-09 14:54:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:54:46] HOME_URL="https://www.centos.org/"
[2026-01-09 14:54:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:54:46] 
[2026-01-09 14:54:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:54:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:54:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:54:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:54:46] 
[2026-01-09 14:54:46] 2026-01-09 22:53:56,607 | INFO     | ***************************************
[2026-01-09 14:54:46] 2026-01-09 22:53:57,110 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-09 14:54:46] 2026-01-09 22:53:57,122 | INFO     | sufficient remaining disk space (114273812480 B)
[2026-01-09 14:54:46] 2026-01-09 22:53:57,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:54:46] 2026-01-09 22:53:57,122 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | INFO     | update_server=False
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:54:46] 2026-01-09 22:53:57,123 | INFO     | aborting loop
[2026-01-09 14:54:46] 2026-01-09 22:53:58,122 | INFO     | all data control threads have been joined
[2026-01-09 14:54:46] 2026-01-09 22:53:58,128 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,128 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,128 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,213 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,294 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,477 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:58,524 | INFO     | all payload control threads have been joined
[2026-01-09 14:54:46] 2026-01-09 22:53:58,565 | INFO     | all job control threads have been joined
[2026-01-09 14:54:46] 2026-01-09 22:53:59,127 | INFO     | [data] control thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,128 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,270 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,364 | INFO     | [job] validate thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,487 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,529 | INFO     | [payload] control thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:53:59,570 | INFO     | [job] control thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:54:00,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:54:46] 2026-01-09 22:54:01,065 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:54:01,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:54:07,405 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:54:46] 2026-01-09 22:54:08,410 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:54:46] 2026-01-09 22:54:26,868 | INFO     | PID=706161 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:54:46] 2026-01-09 22:54:26,869 | INFO     | .. there are 3 such processes running
[2026-01-09 14:54:46] 2026-01-09 22:54:26,869 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:54:46] 2026-01-09 22:54:26,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:54:46] 2026-01-09 22:54:26,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:54:46] 2026-01-09 22:54:40,218 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:54:46] 2026-01-09 22:54:41,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129161534883648)>', '<ExcThread(monitor, started 129160848590592)>']
[2026-01-09 14:54:46] 2026-01-09 22:54:41,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:54:46] 2026-01-09 22:54:41,944 | INFO     | [monitor] control thread has ended
[2026-01-09 14:54:46] 2026-01-09 22:54:46,244 | INFO     | all workflow threads have been joined
[2026-01-09 14:54:46] 2026-01-09 22:54:46,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:54:46] 2026-01-09 22:54:46,244 | INFO     | traces error code: 0
[2026-01-09 14:54:46] 2026-01-09 22:54:46,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:54:46] 2026-01-09 22:54:46,323 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:54:46] 2026-01-09 22:54:46,326 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:54:46] 2026-01-09 22:54:46,328 [wrapper] pilotpid: 706161
[2026-01-09 14:54:46] 2026-01-09 22:54:46,330 [wrapper] Pilot exit status: 0
[2026-01-09 14:54:46] 2026-01-09 22:54:46,335 [wrapper] pandaids: 6963193776
[2026-01-09 14:54:46] 2026-01-09 22:54:46,359 [wrapper] cleanup supervisor_pilot  794064 706162
[2026-01-09 14:54:46] 2026-01-09 22:54:46,361 [wrapper] Test setup, not cleaning
[2026-01-09 14:54:46] 2026-01-09 22:54:46,363 [wrapper] apfmon messages muted
[2026-01-09 14:54:46] 2026-01-09 22:54:46,364 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:54:46] 2026-01-09 22:54:46,366 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:54:46]  *** Error codes and diagnostics ***
[2026-01-09 14:54:46]     "exeErrorCode": 0,
[2026-01-09 14:54:46]     "exeErrorDiag": "",
[2026-01-09 14:54:46]     "pilotErrorCode": 0,
[2026-01-09 14:54:46]     "pilotErrorDiag": "",
[2026-01-09 14:54:46]  *** Listing of results directory ***
[2026-01-09 14:54:46] total 443124
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:21 pilot3.tar.gz
[2026-01-09 14:54:46] -rwx------ 1 boinc boinc     36322 Jan  8 20:25 runpilot2-wrapper.sh
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:30 queuedata.json
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc       100 Jan  9 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:54:46] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 12:40 run_atlas
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc       105 Jan  9 12:40 job.xml
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc 225483579 Jan  9 12:40 EVNT.47898824._001508.pool.root.1
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc    592399 Jan  9 12:40 input.tar.gz
[2026-01-09 14:54:46] drwxrwx--x 2 boinc boinc      4096 Jan  9 12:40 shared
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:40 boinc_setup_complete
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:40 start_atlas.sh
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc      7245 Jan  9 12:40 init_data.xml
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:40 boinc_lockfile
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc      2520 Jan  9 12:40 pandaJob.out
[2026-01-09 14:54:46] -rw------- 1 boinc boinc    989381 Jan  9 12:40 agis_schedconf.cvmfs.json
[2026-01-09 14:54:46] -rw------- 1 boinc boinc   1516240 Jan  9 12:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:54:46] drwx------ 5 boinc boinc      4096 Jan  9 12:40 pilot3
[2026-01-09 14:54:46] -rw------- 1 boinc boinc 221347199 Jan  9 14:53 HITS.47898826._039249.pool.root.1
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc       530 Jan  9 14:53 boinc_task_state.xml
[2026-01-09 14:54:46] -rw------- 1 boinc boinc        95 Jan  9 14:53 pilot_heartbeat.json
[2026-01-09 14:54:46] -rw------- 1 boinc boinc      1021 Jan  9 14:53 memory_monitor_summary.json
[2026-01-09 14:54:46] -rw------- 1 boinc boinc    330766 Jan  9 14:53 log.47898826._039249.job.log.tgz.1
[2026-01-09 14:54:46] -rw------- 1 boinc boinc      7768 Jan  9 14:53 heartbeat.json
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:54 boinc_mmap_file
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc        27 Jan  9 14:54 wrapper_checkpoint.txt
[2026-01-09 14:54:46] -rw------- 1 boinc boinc      4902 Jan  9 14:54 pilotlog.txt
[2026-01-09 14:54:46] -rw------- 1 boinc boinc   1177082 Jan  9 14:54 log.47898826._039249.job.log.1
[2026-01-09 14:54:46] -rw------- 1 boinc boinc       357 Jan  9 14:54 output.list
[2026-01-09 14:54:46] -rw------- 1 boinc boinc   1525760 Jan  9 14:54 result.tar.gz
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:54 runtime_log
[2026-01-09 14:54:46] -rw------- 1 boinc boinc       650 Jan  9 14:54 QbUMDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZOmKDmBJ8wRn.diag
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc      8908 Jan  9 14:54 runtime_log.err
[2026-01-09 14:54:46] -rw-r--r-- 1 boinc boinc     21433 Jan  9 14:54 stderr.txt
[2026-01-09 14:54:46] HITS file was successfully produced:
[2026-01-09 14:54:46] -rw------- 1 boinc boinc 221347199 Jan  9 14:53 shared/HITS.pool.root.1
[2026-01-09 14:54:46]  *** Contents of shared directory: ***
[2026-01-09 14:54:46] total 438456
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc 225483579 Jan  9 12:40 ATLAS.root_0
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc    592399 Jan  9 12:40 input.tar.gz
[2026-01-09 14:54:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:40 start_atlas.sh
[2026-01-09 14:54:46] -rw------- 1 boinc boinc 221347199 Jan  9 14:53 HITS.pool.root.1
[2026-01-09 14:54:46] -rw------- 1 boinc boinc   1525760 Jan  9 14:54 result.tar.gz
14:54:48 (702355): run_atlas exited; CPU time 31168.747710
14:54:48 (702355): called boinc_finish(0)

</stderr_txt>
]]>

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