Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:29 (3148157): wrapper (7.7.26015): starting
13:40:29 (3148157): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 13:40:29] Arguments: --nthreads 3
[2026-01-10 13:40:29] Threads: 3
[2026-01-10 13:40:29] Checking for CVMFS
[2026-01-10 13:40:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:40:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:40:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:40:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:40:29] 2.9.2.0 2462625 3146 86900 154980 0 56 32748814 36864001 0 130560 0 1830107 99.987 119379 2270 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 13:40:29] CVMFS is ok
[2026-01-10 13:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:40:29] Further information can be found at the LHC@home message board.
[2026-01-10 13:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:40:29] Checking for apptainer binary...
[2026-01-10 13:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:40:30] Running /usr/bin/apptainer --version
[2026-01-10 13:40:30] apptainer version 1.4.1-1.1
[2026-01-10 13:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:40:30] thA371b
[2026-01-10 13:40:30] apptainer works
[2026-01-10 13:40:30] Set ATHENA_PROC_NUMBER=3
[2026-01-10 13:40:30] Set ATHENA_CORE_NUMBER=3
[2026-01-10 13:40:30] Starting ATLAS job with PandaID=6963188502
[2026-01-10 13:40:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:35:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:35:02] 2026-01-10 14:34:32,703 | INFO     | update_server=False
[2026-01-10 15:35:02] 2026-01-10 14:34:32,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:35:02] 2026-01-10 14:34:32,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:35:02] 2026-01-10 14:34:32,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:35:02] 2026-01-10 14:34:33,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:35:02] 2026-01-10 14:34:33,273 | INFO     | aborting loop
[2026-01-10 15:35:02] 2026-01-10 14:34:33,500 | INFO     | all data control threads have been joined
[2026-01-10 15:35:02] 2026-01-10 14:34:33,709 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:33,709 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:33,800 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,037 | INFO     | all payload control threads have been joined
[2026-01-10 15:35:02] 2026-01-10 14:34:34,129 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,215 | INFO     | all job control threads have been joined
[2026-01-10 15:35:02] 2026-01-10 14:34:34,279 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,505 | INFO     | [data] control thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,591 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,709 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:34,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:35:02] 2026-01-10 14:34:35,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:35,043 | INFO     | [payload] control thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:35,071 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:35,118 | INFO     | [job] validate thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:35,144 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:35,220 | INFO     | [job] control thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:38,953 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:43,285 | INFO     | job.realtimelogging is not enabled
[2026-01-10 15:35:02] 2026-01-10 14:34:43,529 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:35:02] 2026-01-10 14:34:44,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:35:02] 2026-01-10 14:34:45,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907183572800)>', '<ExcThread(monitor, started 139906445719296)>']
[2026-01-10 15:35:02] 2026-01-10 14:34:50,689 | INFO     | all workflow threads have been joined
[2026-01-10 15:35:02] 2026-01-10 14:34:50,689 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:35:02] 2026-01-10 14:34:50,690 | INFO     | traces error code: 0
[2026-01-10 15:35:02] 2026-01-10 14:34:50,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | INFO     | PID=3151885 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:35:02] 2026-01-10 14:35:02,623 | INFO     | [monitor] control thread has ended
[2026-01-10 15:35:02] 2026-01-10 14:35:02,669 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:35:02] 2026-01-10 14:35:02,671 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:35:02] 2026-01-10 14:35:02,673 [wrapper] pilotpid: 3151885
[2026-01-10 15:35:02] 2026-01-10 14:35:02,676 [wrapper] Pilot exit status: 0
[2026-01-10 15:35:02] 2026-01-10 14:35:02,682 [wrapper] pandaids: 6963188502
[2026-01-10 15:35:02] 2026-01-10 14:35:02,698 [wrapper] cleanup supervisor_pilot 3172807 3151886
[2026-01-10 15:35:02] 2026-01-10 14:35:02,700 [wrapper] Test setup, not cleaning
[2026-01-10 15:35:02] 2026-01-10 14:35:02,702 [wrapper] apfmon messages muted
[2026-01-10 15:35:02] 2026-01-10 14:35:02,705 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:35:02] 2026-01-10 14:35:02,707 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:35:02]  *** Error codes and diagnostics ***
[2026-01-10 15:35:02]     "exeErrorCode": 0,
[2026-01-10 15:35:02]     "exeErrorDiag": "",
[2026-01-10 15:35:02]     "pilotErrorCode": 0,
[2026-01-10 15:35:02]     "pilotErrorDiag": "",
[2026-01-10 15:35:02]  *** Listing of results directory ***
[2026-01-10 15:35:02] total 444340
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 15:35:02] -rwx------ 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:29 queuedata.json
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc       100 Jan 10 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:35:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 13:40 run_atlas
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc       105 Jan 10 13:40 job.xml
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc 226520786 Jan 10 13:40 EVNT.47898824._001442.pool.root.1
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc    592404 Jan 10 13:40 input.tar.gz
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:40 start_atlas.sh
[2026-01-10 15:35:02] drwxrwx--x 2 boinc boinc      4096 Jan 10 13:40 shared
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:40 boinc_setup_complete
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      6440 Jan 10 13:40 init_data.xml
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:40 boinc_lockfile
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      2520 Jan 10 13:40 pandaJob.out
[2026-01-10 15:35:02] -rw------- 1 boinc boinc    989556 Jan 10 13:40 agis_schedconf.cvmfs.json
[2026-01-10 15:35:02] -rw------- 1 boinc boinc   1516240 Jan 10 13:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:35:02] drwx------ 5 boinc boinc      4096 Jan 10 13:40 pilot3
[2026-01-10 15:35:02] -rw------- 1 boinc boinc 222055129 Jan 10 15:34 HITS.47898826._037589.pool.root.1
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc       529 Jan 10 15:34 boinc_task_state.xml
[2026-01-10 15:35:02] -rw------- 1 boinc boinc        95 Jan 10 15:34 pilot_heartbeat.json
[2026-01-10 15:35:02] -rw------- 1 boinc boinc      1015 Jan 10 15:34 memory_monitor_summary.json
[2026-01-10 15:35:02] -rw------- 1 boinc boinc    283719 Jan 10 15:34 log.47898826._037589.job.log.tgz.1
[2026-01-10 15:35:02] -rw------- 1 boinc boinc      7755 Jan 10 15:34 heartbeat.json
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      8192 Jan 10 15:34 boinc_mmap_file
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc        27 Jan 10 15:34 wrapper_checkpoint.txt
[2026-01-10 15:35:02] -rw------- 1 boinc boinc       747 Jan 10 15:35 pilotlog.txt
[2026-01-10 15:35:02] -rw------- 1 boinc boinc    986304 Jan 10 15:35 log.47898826._037589.job.log.1
[2026-01-10 15:35:02] -rw------- 1 boinc boinc       357 Jan 10 15:35 output.list
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc       620 Jan 10 15:35 runtime_log
[2026-01-10 15:35:02] -rw------- 1 boinc boinc   1290240 Jan 10 15:35 result.tar.gz
[2026-01-10 15:35:02] -rw------- 1 boinc boinc       660 Jan 10 15:35 vkSNDm8EJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmw8gKDmORRUGm.diag
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      8902 Jan 10 15:35 runtime_log.err
[2026-01-10 15:35:02] -rw-r--r-- 1 boinc boinc      7510 Jan 10 15:35 stderr.txt
[2026-01-10 15:35:02] HITS file was successfully produced:
[2026-01-10 15:35:02] -rw------- 1 boinc boinc 222055129 Jan 10 15:34 shared/HITS.pool.root.1
[2026-01-10 15:35:02]  *** Contents of shared directory: ***
[2026-01-10 15:35:02] total 439924
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc 226520786 Jan 10 13:40 ATLAS.root_0
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc    592404 Jan 10 13:40 input.tar.gz
[2026-01-10 15:35:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:40 start_atlas.sh
[2026-01-10 15:35:02] -rw------- 1 boinc boinc 222055129 Jan 10 15:34 HITS.pool.root.1
[2026-01-10 15:35:02] -rw------- 1 boinc boinc   1290240 Jan 10 15:35 result.tar.gz
15:35:04 (3148157): run_atlas exited; CPU time 19844.829698
15:35:04 (3148157): called boinc_finish(0)

</stderr_txt>
]]>

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