Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:40 (49601): wrapper (7.7.26015): starting
16:53:40 (49601): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 16:53:40] Arguments: --nthreads 9
[2026-01-09 16:53:40] Threads: 9
[2026-01-09 16:53:40] Checking for CVMFS
[2026-01-09 16:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:53:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:53:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:54:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:54:02] 2.13.3.0 6428 22079 151448 154957 3 64 23968701 39288832 8814 16776704 0 9798288 99.673 9434364 37318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 16:54:02] CVMFS is ok
[2026-01-09 16:54:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:54:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:54:02] Further information can be found at the LHC@home message board.
[2026-01-09 16:54:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:54:02] Checking for apptainer binary...
[2026-01-09 16:54:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:54:02] Running /usr/bin/apptainer --version
[2026-01-09 16:54:02] apptainer version 1.4.5-2.el9
[2026-01-09 16:54:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:54:03] c-211-3.aglt2.org
[2026-01-09 16:54:03] apptainer works
[2026-01-09 16:54:03] Set ATHENA_PROC_NUMBER=9
[2026-01-09 16:54:03] Set ATHENA_CORE_NUMBER=9
[2026-01-09 16:54:03] Starting ATLAS job with PandaID=6963194395
[2026-01-09 16:54:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:21:57]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:21:57] 2026-01-10 05:21:12,511 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:21:57] 2026-01-10 05:21:12,522 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.075775
[2026-01-10 00:21:57] 2026-01-10 05:21:12,535 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963194395/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,536 | INFO     | extracted standard info from prmon json
[2026-01-10 00:21:57] 2026-01-10 05:21:12,536 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:21:57] 2026-01-10 05:21:12,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:21:57] 2026-01-10 05:21:12,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:21:57] 2026-01-10 05:21:12,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:21:57] 2026-01-10 05:21:12,557 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:21:57] 2026-01-10 05:21:12,558 | INFO     | sum of square deviations: 25699740196.997616
[2026-01-10 00:21:57] 2026-01-10 05:21:12,567 | INFO     | sum of deviations: 56770392403.362404
[2026-01-10 00:21:57] 2026-01-10 05:21:12,568 | INFO     | mean x: 1768009125.5022936
[2026-01-10 00:21:57] 2026-01-10 05:21:12,568 | INFO     | mean y: 2537504.637614679
[2026-01-10 00:21:57] 2026-01-10 05:21:12,568 | INFO     | intersect: -3902971697.327651
[2026-01-10 00:21:57] 2026-01-10 05:21:12,569 | INFO     | chi2: 4.799173074831882
[2026-01-10 00:21:57] 2026-01-10 05:21:12,573 | INFO     | sum of square deviations: 24825686319.99077
[2026-01-10 00:21:57] 2026-01-10 05:21:12,583 | INFO     | sum of deviations: 140754345711.58456
[2026-01-10 00:21:57] 2026-01-10 05:21:12,583 | INFO     | mean x: 1768008973.0046403
[2026-01-10 00:21:57] 2026-01-10 05:21:12,583 | INFO     | mean y: 2552090.7076566126
[2026-01-10 00:21:57] 2026-01-10 05:21:12,583 | INFO     | intersect: -10021539207.307714
[2026-01-10 00:21:57] 2026-01-10 05:21:12,584 | INFO     | chi2: 2.696789704537209
[2026-01-10 00:21:57] 2026-01-10 05:21:12,584 | INFO     | current chi2=2.696789704537209 (change=43.807200480435284 %)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,585 | INFO     | sum of square deviations: 23971599850.5
[2026-01-10 00:21:57] 2026-01-10 05:21:12,594 | INFO     | sum of deviations: 138638228931.99997
[2026-01-10 00:21:57] 2026-01-10 05:21:12,595 | INFO     | mean x: 1768008820.5
[2026-01-10 00:21:57] 2026-01-10 05:21:12,599 | INFO     | mean y: 2551712.3380281692
[2026-01-10 00:21:57] 2026-01-10 05:21:12,599 | INFO     | intersect: -10222615282.728497
[2026-01-10 00:21:57] 2026-01-10 05:21:12,600 | INFO     | chi2: 2.697253665556044
[2026-01-10 00:21:57] 2026-01-10 05:21:12,600 | INFO     | current chi2=2.697253665556044 (change=-0.01720419719989538 %)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,600 | INFO     | right removable region: 425
[2026-01-10 00:21:57] 2026-01-10 05:21:12,601 | INFO     | sum of square deviations: 24825604826.97912
[2026-01-10 00:21:57] 2026-01-10 05:21:12,610 | INFO     | sum of deviations: -52122796128.60093
[2026-01-10 00:21:57] 2026-01-10 05:21:12,610 | INFO     | mean x: 1768009278.0069606
[2026-01-10 00:21:57] 2026-01-10 05:21:12,610 | INFO     | mean y: 2556466.5336426916
[2026-01-10 00:21:57] 2026-01-10 05:21:12,610 | INFO     | intersect: 3714594412.5692706
[2026-01-10 00:21:57] 2026-01-10 05:21:12,615 | INFO     | chi2: 2.491382251314784
[2026-01-10 00:21:57] 2026-01-10 05:21:12,615 | INFO     | current chi2=2.491382251314784 (change=48.08725977439231 %)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,616 | INFO     | sum of square deviations: 23971464004.385166
[2026-01-10 00:21:57] 2026-01-10 05:21:12,624 | INFO     | sum of deviations: -89515966966.39906
[2026-01-10 00:21:57] 2026-01-10 05:21:12,624 | INFO     | mean x: 1768009430.5164318
[2026-01-10 00:21:57] 2026-01-10 05:21:12,625 | INFO     | mean y: 2563125.3427230045
[2026-01-10 00:21:57] 2026-01-10 05:21:12,625 | INFO     | intersect: 6604791247.47323
[2026-01-10 00:21:57] 2026-01-10 05:21:12,625 | INFO     | chi2: 2.188893698373124
[2026-01-10 00:21:57] 2026-01-10 05:21:12,626 | INFO     | current chi2=2.188893698373124 (change=12.141394712996242 %)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,626 | INFO     | left removable region: 20
[2026-01-10 00:21:57] 2026-01-10 05:21:12,626 | INFO     | sum of square deviations: 20598082404.79999
[2026-01-10 00:21:57] 2026-01-10 05:21:12,638 | INFO     | sum of deviations: -11731273122.066673
[2026-01-10 00:21:57] 2026-01-10 05:21:12,638 | INFO     | mean x: 1768009400.0222223
[2026-01-10 00:21:57] 2026-01-10 05:21:12,639 | INFO     | mean y: 2579305.1185185187
[2026-01-10 00:21:57] 2026-01-10 05:21:12,639 | INFO     | intersect: 1009517754.3602122
[2026-01-10 00:21:57] 2026-01-10 05:21:12,639 | INFO     | chi2: 0.035255247485827076
[2026-01-10 00:21:57] 2026-01-10 05:21:12,640 | INFO     | current memory leak: -0.57 B/s (using 405 data points, chi2=0.04)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,640 | INFO     | could have reported an average CPU frequency of 2600 MHz (18 samples)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,641 | INFO     | ..............................
[2026-01-10 00:21:57] 2026-01-10 05:21:12,641 | INFO     | . Timing measurements:
[2026-01-10 00:21:57] 2026-01-10 05:21:12,645 | INFO     | . get job = 1 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,645 | INFO     | . initial setup = 6 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,645 | INFO     | . payload setup = 41 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,645 | INFO     | . stage-in = 1 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,645 | INFO     | . payload execution = 26585 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,646 | INFO     | . stage-out = 5 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,646 | INFO     | . log creation = 0 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,646 | INFO     | ..............................
[2026-01-10 00:21:57] 2026-01-10 05:21:12,919 | INFO     | 
[2026-01-10 00:21:57] 2026-01-10 05:21:12,919 | INFO     | job summary report
[2026-01-10 00:21:57] 2026-01-10 05:21:12,919 | INFO     | --------------------------------------------------
[2026-01-10 00:21:57] 2026-01-10 05:21:12,919 | INFO     | PanDA job id: 6963194395
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | task id: 47898826
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | errors: (none)
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | pilot state: finished 
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | transexitcode: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | exeerrorcode: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | exeerrordiag: 
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | exitcode: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:12,920 | INFO     | exitmsg: OK
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | cpuconsumptiontime: 65717 s
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | nevents: 400
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | neventsw: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | pid: 66660
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | pgrp: 66660
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | corecount: 9
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | event service: False
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2283999, 23: 2284027, 35: 2284257, 36: 2284345, 47: 2284501, 26631: 2321098, 26632: 2321097, 26638: 2330151, 26639: 2330207, 26
[2026-01-10 00:21:57] 2026-01-10 05:21:12,921 | INFO     | --------------------------------------------------
[2026-01-10 00:21:57] 2026-01-10 05:21:12,922 | INFO     | 
[2026-01-10 00:21:57] 2026-01-10 05:21:12,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 00:21:57] 2026-01-10 05:21:13,244 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:21:57] 2026-01-10 05:21:13,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,247 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:21:57] 2026-01-10 05:21:13,247 | INFO     | job 6963194395 has completed (purged errors)
[2026-01-10 00:21:57] 2026-01-10 05:21:13,247 | INFO     | overall cleanup function is called
[2026-01-10 00:21:57] 2026-01-10 05:21:14,275 | INFO     | --- collectZombieJob: --- 10, [66660]
[2026-01-10 00:21:57] 2026-01-10 05:21:14,275 | INFO     | zombie collector waiting for pid 66660
[2026-01-10 00:21:57] 2026-01-10 05:21:14,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:21:57] 2026-01-10 05:21:14,276 | INFO     | collected zombie processes
[2026-01-10 00:21:57] 2026-01-10 05:21:14,276 | INFO     | will attempt to kill all subprocesses of pid=66660
[2026-01-10 00:21:57] 2026-01-10 05:21:14,633 | INFO     | PID=55038 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:21:57] 2026-01-10 05:21:14,633 | INFO     | .. there are 7 such processes running
[2026-01-10 00:21:57] 2026-01-10 05:21:15,145 | INFO     | process IDs to be killed: [66660] (in reverse order)
[2026-01-10 00:21:57] 2026-01-10 05:21:15,611 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:21:57] 2026-01-10 05:21:15,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:21:57] 2026-01-10 05:21:15,624 | INFO     | did not find any defunct processes belonging to 66660
[2026-01-10 00:21:57] 2026-01-10 05:21:15,639 | INFO     | did not find any defunct processes belonging to 66660
[2026-01-10 00:21:57] 2026-01-10 05:21:15,640 | INFO     | ready for new job
[2026-01-10 00:21:57] 2026-01-10 05:21:15,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:21:57] 2026-01-10 05:21:15,647 | INFO     | ***************************************
[2026-01-10 00:21:57] 2026-01-10 05:21:15,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:21:57] 2026-01-10 05:21:15,647 | INFO     | ***************************************
[2026-01-10 00:21:57] 2026-01-10 05:21:15,647 | INFO     | 
[2026-01-10 00:21:57] 2026-01-10 05:21:15,649 | INFO     | architecture information:
[2026-01-10 00:21:57] 2026-01-10 05:21:15,653 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:21:57] 2026-01-10 05:21:15,737 | INFO     | cat /etc/os-release:
[2026-01-10 00:21:57] NAME="CentOS Linux"
[2026-01-10 00:21:57] VERSION="7 (Core)"
[2026-01-10 00:21:57] ID="centos"
[2026-01-10 00:21:57] ID_LIKE="rhel fedora"
[2026-01-10 00:21:57] VERSION_ID="7"
[2026-01-10 00:21:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:21:57] ANSI_COLOR="0;31"
[2026-01-10 00:21:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:21:57] HOME_URL="https://www.centos.org/"
[2026-01-10 00:21:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:21:57] 
[2026-01-10 00:21:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:21:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:21:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:21:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:21:57] 
[2026-01-10 00:21:57] 2026-01-10 05:21:15,737 | INFO     | ***************************************
[2026-01-10 00:21:57] 2026-01-10 05:21:16,240 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 00:21:57] 2026-01-10 05:21:16,287 | INFO     | sufficient remaining disk space (53215232000 B)
[2026-01-10 00:21:57] 2026-01-10 05:21:16,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:21:57] 2026-01-10 05:21:16,288 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:21:57] 2026-01-10 05:21:16,288 | INFO     | update_server=False
[2026-01-10 00:21:57] 2026-01-10 05:21:16,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:21:57] 2026-01-10 05:21:16,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:21:57] 2026-01-10 05:21:16,292 | INFO     | aborting loop
[2026-01-10 00:21:57] 2026-01-10 05:21:16,883 | INFO     | all job control threads have been joined
[2026-01-10 00:21:57] 2026-01-10 05:21:17,069 | INFO     | all data control threads have been joined
[2026-01-10 00:21:57] 2026-01-10 05:21:17,294 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:17,300 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:17,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:21:57] 2026-01-10 05:21:17,502 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:17,622 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:17,671 | INFO     | all payload control threads have been joined
[2026-01-10 00:21:57] 2026-01-10 05:21:17,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:21:57] 2026-01-10 05:21:17,891 | INFO     | [job] control thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:17,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:21:57] 2026-01-10 05:21:17,990 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,075 | INFO     | [data] control thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,221 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,343 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,344 | INFO     | [job] validate thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,456 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,676 | INFO     | [payload] control thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,826 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:18,946 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:19,502 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:21,791 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:21:57] 2026-01-10 05:21:49,555 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:21:57] 2026-01-10 05:21:49,953 | INFO     | PID=55038 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 00:21:57] 2026-01-10 05:21:49,953 | INFO     | .. there are 7 such processes running
[2026-01-10 00:21:57] 2026-01-10 05:21:49,953 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:21:57] 2026-01-10 05:21:49,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:21:57] 2026-01-10 05:21:49,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:21:57] 2026-01-10 05:21:49,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216010856256)>', '<ExcThread(monitor, started 140215649826560)>']
[2026-01-10 00:21:57] 2026-01-10 05:21:50,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:21:57] 2026-01-10 05:21:50,961 | INFO     | [monitor] control thread has ended
[2026-01-10 00:21:57] 2026-01-10 05:21:55,014 | INFO     | all workflow threads have been joined
[2026-01-10 00:21:57] 2026-01-10 05:21:55,014 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:21:57] 2026-01-10 05:21:55,014 | INFO     | traces error code: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:55,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:21:57] 2026-01-10 05:21:55,595 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:21:57] 2026-01-10 05:21:55,692 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:21:57] 2026-01-10 05:21:55,769 [wrapper] pilotpid: 55038
[2026-01-10 00:21:57] 2026-01-10 05:21:55,822 [wrapper] Pilot exit status: 0
[2026-01-10 00:21:57] 2026-01-10 05:21:56,061 [wrapper] pandaids: 6963194395
[2026-01-10 00:21:57] 2026-01-10 05:21:56,215 [wrapper] cleanup supervisor_pilot  708126 55039
[2026-01-10 00:21:57] 2026-01-10 05:21:56,250 [wrapper] Test setup, not cleaning
[2026-01-10 00:21:57] 2026-01-10 05:21:56,275 [wrapper] apfmon messages muted
[2026-01-10 00:21:57] 2026-01-10 05:21:56,326 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:21:57] 2026-01-10 05:21:56,347 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:21:57]  *** Error codes and diagnostics ***
[2026-01-10 00:21:57]     "exeErrorCode": 0,
[2026-01-10 00:21:57]     "exeErrorDiag": "",
[2026-01-10 00:21:57]     "pilotErrorCode": 0,
[2026-01-10 00:21:57]     "pilotErrorDiag": "",
[2026-01-10 00:21:57]  *** Listing of results directory ***
[2026-01-10 00:21:57] total 443708
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 00:21:57] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:21:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:53 run_atlas
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:53 job.xml
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas 228010124 Jan  9 16:53 EVNT.47898824._001517.pool.root.1
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:53 start_atlas.sh
[2026-01-10 00:21:57] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:53 shared
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 16:53 input.tar.gz
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:53 boinc_lockfile
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 16:54 pandaJob.out
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas        57 Jan  9 16:54 setup.sh.local
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas    989398 Jan  9 16:54 agis_schedconf.cvmfs.json
[2026-01-10 00:21:57] drwx------. 5 boincer umatlas      4096 Jan  9 16:55 pilot3
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas 214258619 Jan 10 00:17 HITS.47898826._039458.pool.root.1
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas       531 Jan 10 00:17 boinc_task_state.xml
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas      1037 Jan 10 00:20 memory_monitor_summary.json
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas    638203 Jan 10 00:20 log.47898826._039458.job.log.tgz.1
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas        95 Jan 10 00:20 pilot_heartbeat.json
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas      7823 Jan 10 00:21 heartbeat.json
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas      6656 Jan 10 00:21 init_data.xml
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:21 boinc_mmap_file
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:21 wrapper_checkpoint.txt
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas      4821 Jan 10 00:21 pilotlog.txt
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas   3448738 Jan 10 00:21 log.47898826._039458.job.log.1
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas       357 Jan 10 00:21 output.list
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:21 runtime_log
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas   4106240 Jan 10 00:21 result.tar.gz
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:21 runtime_log.err
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas       656 Jan 10 00:21 3kUMDmlFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsOmKDm0aBK6m.diag
[2026-01-10 00:21:57] -rw-r--r--. 1 boincer umatlas     21262 Jan 10 00:21 stderr.txt
[2026-01-10 00:21:57] HITS file was successfully produced:
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas 214258619 Jan 10 00:17 shared/HITS.pool.root.1
[2026-01-10 00:21:57]  *** Contents of shared directory: ***
[2026-01-10 00:21:57] total 436520
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas 228010124 Jan  9 16:53 ATLAS.root_0
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:53 start_atlas.sh
[2026-01-10 00:21:57] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 16:53 input.tar.gz
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas 214258619 Jan 10 00:17 HITS.pool.root.1
[2026-01-10 00:21:57] -rw-------. 1 boincer umatlas   4106240 Jan 10 00:21 result.tar.gz
00:21:58 (49601): run_atlas exited; CPU time 66268.814285
00:21:58 (49601): called boinc_finish(0)

</stderr_txt>
]]>

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