Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:54:46 (2809714): wrapper (7.7.26015): starting
05:54:46 (2809714): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 05:54:46] Arguments: --nthreads 3
[2026-01-10 05:54:46] Threads: 3
[2026-01-10 05:54:46] Checking for CVMFS
[2026-01-10 05:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:54:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:54:46] 2.9.2.0 2006203 3357 79000 154968 0 57 33945570 36864000 0 130560 0 2076683 99.987 127817 6157 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 05:54:46] CVMFS is ok
[2026-01-10 05:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 05:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 05:54:46] Further information can be found at the LHC@home message board.
[2026-01-10 05:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:54:46] Checking for apptainer binary...
[2026-01-10 05:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:54:46] Running /usr/bin/apptainer --version
[2026-01-10 05:54:46] apptainer version 1.4.1-1.1
[2026-01-10 05:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:54:46] magicA250a
[2026-01-10 05:54:46] apptainer works
[2026-01-10 05:54:46] Set ATHENA_PROC_NUMBER=3
[2026-01-10 05:54:46] Set ATHENA_CORE_NUMBER=3
[2026-01-10 05:54:46] Starting ATLAS job with PandaID=6963193743
[2026-01-10 05:54:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:48:26]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:48:26] 2026-01-10 06:47:56,983 | INFO     | all job control threads have been joined
[2026-01-10 07:48:26] 2026-01-10 06:47:57,094 | INFO     | all payload control threads have been joined
[2026-01-10 07:48:26] 2026-01-10 06:47:57,587 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:57,588 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:57,588 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:57,667 | INFO     | all data control threads have been joined
[2026-01-10 07:48:26] 2026-01-10 06:47:57,881 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:57,989 | INFO     | [job] control thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,046 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,080 | INFO     | [job] validate thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,099 | INFO     | [payload] control thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,249 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,586 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,668 | INFO     | [data] control thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,757 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,773 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:58,831 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:47:59,164 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:48:26] 2026-01-10 06:48:00,793 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:48:26] 2026-01-10 06:48:02,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160079763264)>', '<ExcThread(monitor, started 140159588747008)>']
[2026-01-10 07:48:26] 2026-01-10 06:48:07,454 | INFO     | all workflow threads have been joined
[2026-01-10 07:48:26] 2026-01-10 06:48:07,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:48:26] 2026-01-10 06:48:07,455 | INFO     | traces error code: 0
[2026-01-10 07:48:26] 2026-01-10 06:48:07,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:48:26] 2026-01-10 06:48:26,795 | INFO     | PID=2813437 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:48:26] 2026-01-10 06:48:26,796 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:48:26] 2026-01-10 06:48:26,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:48:26] 2026-01-10 06:48:26,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:48:26] 2026-01-10 06:48:26,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:48:26] 2026-01-10 06:48:26,796 | INFO     | [monitor] control thread has ended
[2026-01-10 07:48:26] 2026-01-10 06:48:26,841 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:48:26] 2026-01-10 06:48:26,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:48:26] 2026-01-10 06:48:26,846 [wrapper] pilotpid: 2813437
[2026-01-10 07:48:26] 2026-01-10 06:48:26,848 [wrapper] Pilot exit status: 0
[2026-01-10 07:48:26] 2026-01-10 06:48:26,855 [wrapper] pandaids: 6963193743
[2026-01-10 07:48:26] 2026-01-10 06:48:26,871 [wrapper] cleanup supervisor_pilot 2834246 2813438
[2026-01-10 07:48:26] 2026-01-10 06:48:26,874 [wrapper] Test setup, not cleaning
[2026-01-10 07:48:26] 2026-01-10 06:48:26,876 [wrapper] apfmon messages muted
[2026-01-10 07:48:26] 2026-01-10 06:48:26,878 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:48:26] 2026-01-10 06:48:26,880 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:48:26]  *** Error codes and diagnostics ***
[2026-01-10 07:48:26]     "exeErrorCode": 0,
[2026-01-10 07:48:26]     "exeErrorDiag": "",
[2026-01-10 07:48:26]     "pilotErrorCode": 0,
[2026-01-10 07:48:26]     "pilotErrorDiag": "",
[2026-01-10 07:48:26]  *** Listing of results directory ***
[2026-01-10 07:48:26] total 443288
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 07:48:26] -rwx------ 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc       100 Jan 10 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:48:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 05:54 run_atlas
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc       105 Jan 10 05:54 job.xml
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc 226244362 Jan 10 05:54 EVNT.47898824._001507.pool.root.1
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc    592398 Jan 10 05:54 input.tar.gz
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:54 start_atlas.sh
[2026-01-10 07:48:26] drwxrwx--x 2 boinc boinc      4096 Jan 10 05:54 shared
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:54 boinc_setup_complete
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      6442 Jan 10 05:54 init_data.xml
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:54 boinc_lockfile
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      2520 Jan 10 05:54 pandaJob.out
[2026-01-10 07:48:26] -rw------- 1 boinc boinc    989374 Jan 10 05:54 agis_schedconf.cvmfs.json
[2026-01-10 07:48:26] -rw------- 1 boinc boinc   1516240 Jan 10 05:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:48:26] drwx------ 5 boinc boinc      4096 Jan 10 05:54 pilot3
[2026-01-10 07:48:26] -rw------- 1 boinc boinc 221258554 Jan 10 07:47 HITS.47898826._039216.pool.root.1
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc       529 Jan 10 07:47 boinc_task_state.xml
[2026-01-10 07:48:26] -rw------- 1 boinc boinc      1020 Jan 10 07:47 memory_monitor_summary.json
[2026-01-10 07:48:26] -rw------- 1 boinc boinc    283868 Jan 10 07:47 log.47898826._039216.job.log.tgz.1
[2026-01-10 07:48:26] -rw------- 1 boinc boinc      7764 Jan 10 07:47 heartbeat.json
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      8192 Jan 10 07:48 boinc_mmap_file
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc        27 Jan 10 07:48 wrapper_checkpoint.txt
[2026-01-10 07:48:26] -rw------- 1 boinc boinc       747 Jan 10 07:48 pilotlog.txt
[2026-01-10 07:48:26] -rw------- 1 boinc boinc        95 Jan 10 07:48 pilot_heartbeat.json
[2026-01-10 07:48:26] -rw------- 1 boinc boinc    979409 Jan 10 07:48 log.47898826._039216.job.log.1
[2026-01-10 07:48:26] -rw------- 1 boinc boinc       357 Jan 10 07:48 output.list
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc       620 Jan 10 07:48 runtime_log
[2026-01-10 07:48:26] -rw------- 1 boinc boinc   1280000 Jan 10 07:48 result.tar.gz
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      8917 Jan 10 07:48 runtime_log.err
[2026-01-10 07:48:26] -rw------- 1 boinc boinc       663 Jan 10 07:48 rbFMDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNOmKDmSc9Com.diag
[2026-01-10 07:48:26] -rw-r--r-- 1 boinc boinc      6608 Jan 10 07:48 stderr.txt
[2026-01-10 07:48:26] HITS file was successfully produced:
[2026-01-10 07:48:26] -rw------- 1 boinc boinc 221258554 Jan 10 07:47 shared/HITS.pool.root.1
[2026-01-10 07:48:26]  *** Contents of shared directory: ***
[2026-01-10 07:48:26] total 438876
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc 226244362 Jan 10 05:54 ATLAS.root_0
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc    592398 Jan 10 05:54 input.tar.gz
[2026-01-10 07:48:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:54 start_atlas.sh
[2026-01-10 07:48:26] -rw------- 1 boinc boinc 221258554 Jan 10 07:47 HITS.pool.root.1
[2026-01-10 07:48:26] -rw------- 1 boinc boinc   1280000 Jan 10 07:48 result.tar.gz
07:48:28 (2809714): run_atlas exited; CPU time 19635.937216
07:48:28 (2809714): called boinc_finish(0)

</stderr_txt>
]]>

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