Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:31:59 (2959089): wrapper (7.7.26015): starting
08:31:59 (2959089): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 08:31:59] Arguments: --nthreads 12
[2026-01-10 08:31:59] Threads: 12
[2026-01-10 08:31:59] Checking for CVMFS
[2026-01-10 08:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:31:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:31:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:32:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:32:00] 2.13.3.0 2283357 2985 145164 154972 3 293 39701669 46080001 22036 130560 0 17624204 99.877 5132421 23685 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-10 08:32:00] CVMFS is ok
[2026-01-10 08:32:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:32:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:32:00] Further information can be found at the LHC@home message board.
[2026-01-10 08:32:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:32:00] Checking for apptainer binary...
[2026-01-10 08:32:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:32:00] Running /usr/bin/apptainer --version
[2026-01-10 08:32:00] apptainer version 1.4.5-2.el9
[2026-01-10 08:32:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:32:01] mff2102.farm.particle.cz
[2026-01-10 08:32:01] apptainer works
[2026-01-10 08:32:01] Set ATHENA_PROC_NUMBER=12
[2026-01-10 08:32:01] Set ATHENA_CORE_NUMBER=12
[2026-01-10 08:32:01] Starting ATLAS job with PandaID=6963189958
[2026-01-10 08:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:02:05]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:02:05] 2026-01-10 09:36:54,477 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:02:05] 2026-01-10 09:36:54,477 | INFO     | sum of square deviations: 549264504.3305769
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | sum of deviations: 16835458680.619839
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | mean x: 1768034105.0743802
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | mean y: 2624950.26446281
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | intersect: -54189235050.19867
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | chi2: 2.5951159540992794
[2026-01-10 11:02:05] 2026-01-10 09:36:54,478 | INFO     | sum of square deviations: 483945094.3017241
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | sum of deviations: 24443175293.043106
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | mean x: 1768033952.5775862
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | mean y: 2642041.9396551726
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | intersect: -89297496208.78885
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | chi2: 1.8343369492755603
[2026-01-10 11:02:05] 2026-01-10 09:36:54,479 | INFO     | current chi2=1.8343369492755603 (change=29.315800075213694 %)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,480 | INFO     | sum of square deviations: 424021134.27027035
[2026-01-10 11:02:05] 2026-01-10 09:36:54,480 | INFO     | sum of deviations: 23336593456.027023
[2026-01-10 11:02:05] 2026-01-10 09:36:54,480 | INFO     | mean x: 1768033800.0810812
[2026-01-10 11:02:05] 2026-01-10 09:36:54,480 | INFO     | mean y: 2639224.774774775
[2026-01-10 11:02:05] 2026-01-10 09:36:54,480 | INFO     | intersect: -97303562457.87004
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | chi2: 1.836191655532649
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | current chi2=1.836191655532649 (change=-0.10111044526585457 %)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | right removable region: 110
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | sum of square deviations: 483939604.3017241
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | sum of deviations: -6889112212.155173
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | mean x: 1768034257.5775862
[2026-01-10 11:02:05] 2026-01-10 09:36:54,481 | INFO     | mean y: 2679577.0172413792
[2026-01-10 11:02:05] 2026-01-10 09:36:54,482 | INFO     | intersect: 25171494625.6662
[2026-01-10 11:02:05] 2026-01-10 09:36:54,482 | INFO     | chi2: 0.861047750426126
[2026-01-10 11:02:05] 2026-01-10 09:36:54,482 | INFO     | current chi2=0.861047750426126 (change=66.82045173873622 %)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,482 | INFO     | sum of square deviations: 424010154.27027035
[2026-01-10 11:02:05] 2026-01-10 09:36:54,482 | INFO     | sum of deviations: -9998211995.405407
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | mean x: 1768034410.0810812
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | mean y: 2687282.7117117117
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | intersect: 41693157827.184784
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | chi2: 0.8020070129004412
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | current chi2=0.8020070129004412 (change=6.856848240584338 %)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | left removable region: 20
[2026-01-10 11:02:05] 2026-01-10 09:36:54,483 | INFO     | sum of square deviations: 225988385.59999987
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | sum of deviations: -1334228787.3999977
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | mean x: 1768034379.6
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | mean y: 2707259.488888889
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | intersect: 10441130278.938152
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | chi2: 0.004453773712630001
[2026-01-10 11:02:05] 2026-01-10 09:36:54,484 | INFO     | current memory leak: -5.90 B/s (using 90 data points, chi2=0.00)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | could have reported an average CPU frequency of 2825 MHz (8 samples)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | ..............................
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . Timing measurements:
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . get job = 0 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . initial setup = 2 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . payload setup = 25 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . stage-in = 0 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . payload execution = 7345 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . stage-out = 1 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | . log creation = 0 s
[2026-01-10 11:02:05] 2026-01-10 09:36:54,485 | INFO     | ..............................
[2026-01-10 11:02:05] 2026-01-10 09:36:54,535 | INFO     | sufficient remaining disk space (1376789725184 B)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,535 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,536 | INFO     | size of work directory /scratch/.boinc/slots/6/PanDA_Pilot-6963189958: 4755562 B (within 4404019200 B limit)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,536 | INFO     | pfn file=/scratch/.boinc/slots/6/PanDA_Pilot-6963189958/HITS.47898826._038543.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,537 | INFO     | total size of present files: 0 B (workdir size: 4755562 B)
[2026-01-10 11:02:05] 2026-01-10 09:36:54,537 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/6/PanDA_Pilot-6963189958/HITS.47898826._038543.pool.root.1 since it does not exist
[2026-01-10 11:02:05] 2026-01-10 09:36:54,901 | INFO     | time since job start (7455s) is within the limit (349056.0s)
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | 
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | job summary report
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | --------------------------------------------------
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | PanDA job id: 6963189958
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | task id: 47898826
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | errors: (none)
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | pilot state: finished 
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | transexitcode: 0
[2026-01-10 11:02:05] 2026-01-10 09:36:55,012 | INFO     | exeerrorcode: 0
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | exeerrordiag: 
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | exitcode: 0
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | exitmsg: OK
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | cpuconsumptiontime: 54394 s
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | nevents: 400
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | neventsw: 0
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | pid: 2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | pgrp: 2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | corecount: 12
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | event service: False
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | sizes: {0: 2283801, 1: 2284000, 12: 2284000, 15: 2284290, 22: 2284318, 7375: 2312156, 7377: 2321212, 7419: 2321378}
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | --------------------------------------------------
[2026-01-10 11:02:05] 2026-01-10 09:36:55,013 | INFO     | 
[2026-01-10 11:02:05] 2026-01-10 09:36:55,014 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2026-01-10 11:02:05] 2026-01-10 09:36:55,160 | INFO     | number of running child processes to parent process 2993566: 1
[2026-01-10 11:02:05] 2026-01-10 09:36:55,160 | INFO     | maximum number of monitored processes: 6
[2026-01-10 11:02:05] 2026-01-10 09:36:55,160 | INFO     | aborting job monitoring since job object (job id=6963189958) has expired
[2026-01-10 11:02:05] 2026-01-10 09:36:55,209 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | job 6963189958 has completed (purged errors)
[2026-01-10 11:02:05] 2026-01-10 09:36:55,211 | INFO     | overall cleanup function is called
[2026-01-10 11:02:05] 2026-01-10 09:36:56,226 | INFO     | --- collectZombieJob: --- 10, [2993566]
[2026-01-10 11:02:05] 2026-01-10 09:36:56,226 | INFO     | zombie collector waiting for pid 2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:56,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:02:05] 2026-01-10 09:36:56,226 | INFO     | collected zombie processes
[2026-01-10 11:02:05] 2026-01-10 09:36:56,226 | INFO     | will attempt to kill all subprocesses of pid=2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:56,823 | INFO     | process IDs to be killed: [2993566] (in reverse order)
[2026-01-10 11:02:05] 2026-01-10 09:36:57,295 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:02:05] 2026-01-10 09:36:57,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:02:05] 2026-01-10 09:36:57,319 | INFO     | did not find any defunct processes belonging to 2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:57,340 | INFO     | did not find any defunct processes belonging to 2993566
[2026-01-10 11:02:05] 2026-01-10 09:36:57,344 | INFO     | ready for new job
[2026-01-10 11:02:05] 2026-01-10 09:36:57,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:02:05] 2026-01-10 09:36:57,346 | INFO     | ***************************************
[2026-01-10 11:02:05] 2026-01-10 09:36:57,346 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:02:05] 2026-01-10 09:36:57,346 | INFO     | ***************************************
[2026-01-10 11:02:05] 2026-01-10 09:36:57,346 | INFO     | 
[2026-01-10 11:02:05] 2026-01-10 09:36:57,356 | INFO     | architecture information:
[2026-01-10 11:02:05] 2026-01-10 09:36:57,360 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:02:05] 2026-01-10 09:36:57,469 | INFO     | cat /etc/os-release:
[2026-01-10 11:02:05] NAME="CentOS Linux"
[2026-01-10 11:02:05] VERSION="7 (Core)"
[2026-01-10 11:02:05] ID="centos"
[2026-01-10 11:02:05] ID_LIKE="rhel fedora"
[2026-01-10 11:02:05] VERSION_ID="7"
[2026-01-10 11:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:02:05] ANSI_COLOR="0;31"
[2026-01-10 11:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:02:05] HOME_URL="https://www.centos.org/"
[2026-01-10 11:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:02:05] 
[2026-01-10 11:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:02:05] 
[2026-01-10 11:02:05] 2026-01-10 09:36:57,469 | INFO     | ***************************************
[2026-01-10 11:02:05] 2026-01-10 09:36:57,973 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2026-01-10 11:02:05] 2026-01-10 09:36:58,121 | INFO     | sufficient remaining disk space (1376787628032 B)
[2026-01-10 11:02:05] 2026-01-10 09:36:58,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:02:05] 2026-01-10 09:36:58,122 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:02:05] 2026-01-10 09:36:58,122 | INFO     | update_server=False
[2026-01-10 11:02:05] 2026-01-10 09:36:58,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:02:05] 2026-01-10 09:36:58,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:02:05] 2026-01-10 09:36:58,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:02:05] 2026-01-10 09:36:58,671 | INFO     | aborting loop
[2026-01-10 11:02:05] 2026-01-10 09:36:58,744 | INFO     | all data control threads have been joined
[2026-01-10 11:02:05] 2026-01-10 09:36:59,117 | INFO     | all payload control threads have been joined
[2026-01-10 11:02:05] 2026-01-10 09:36:59,121 | INFO     | all job control threads have been joined
[2026-01-10 11:02:05] 2026-01-10 09:36:59,128 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:36:59,265 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:36:59,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:02:05] 2026-01-10 09:36:59,677 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:36:59,751 | INFO     | [data] control thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:36:59,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:02:05] 2026-01-10 09:36:59,859 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:36:59,888 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,123 | INFO     | [payload] control thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,127 | INFO     | [job] control thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,231 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,320 | INFO     | [job] validate thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,430 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,498 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,571 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,667 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:00,676 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:03,780 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:02:05] 2026-01-10 09:37:28,551 | INFO     | PID=2972106 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:02:05] 2026-01-10 09:37:28,552 | INFO     | .. there are 19 such processes running
[2026-01-10 11:02:05] 2026-01-10 09:37:28,552 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:02:05] 2026-01-10 09:37:28,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:02:05] 2026-01-10 09:37:28,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:02:05] 2026-01-10 09:37:51,210 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:02:05] 2026-01-10 09:37:51,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146791556928)>', '<ExcThread(monitor, started 140146410231552)>']
[2026-01-10 11:02:05] 2026-01-10 09:37:51,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:02:05] 2026-01-10 09:37:51,690 | INFO     | [monitor] control thread has ended
[2026-01-10 11:02:05] 2026-01-10 09:37:56,476 | INFO     | all workflow threads have been joined
[2026-01-10 11:02:05] 2026-01-10 09:37:56,476 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:02:05] 2026-01-10 09:37:56,476 | INFO     | traces error code: 0
[2026-01-10 11:02:05] 2026-01-10 09:37:56,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:02:05] 2026-01-10 09:37:56,655 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:02:05] 2026-01-10 09:37:56,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:02:05] 2026-01-10 09:37:56,717 [wrapper] pilotpid: 2972106
[2026-01-10 11:02:05] 2026-01-10 09:37:56,737 [wrapper] Pilot exit status: 0
[2026-01-10 11:02:05] 2026-01-10 09:37:56,787 [wrapper] pandaids: 6963189958
[2026-01-10 11:02:05] 2026-01-10 09:37:56,946 [wrapper] cleanup supervisor_pilot 3168448 2972107
[2026-01-10 11:02:05] 2026-01-10 09:37:56,962 [wrapper] Test setup, not cleaning
[2026-01-10 11:02:05] 2026-01-10 09:37:56,968 [wrapper] apfmon messages muted
[2026-01-10 11:02:05] 2026-01-10 09:37:56,972 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:02:05] 2026-01-10 09:37:56,999 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:02:05]  *** Error codes and diagnostics ***
[2026-01-10 11:02:05]     "exeErrorCode": 0,
[2026-01-10 11:02:05]     "exeErrorDiag": "",
[2026-01-10 11:02:05]     "pilotErrorCode": 0,
[2026-01-10 11:02:05]     "pilotErrorDiag": "",
[2026-01-10 11:02:05]  *** Listing of results directory ***
[2026-01-10 11:02:05] total 445112
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 11:02:05] -rwx------ 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:02:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:31 run_atlas
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:31 job.xml
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc      6674 Jan 10 08:31 init_data.xml
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc 226309977 Jan 10 08:31 EVNT.47898824._001480.pool.root.1
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 11:02:05] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:31 shared
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc    592405 Jan 10 08:31 input.tar.gz
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:31 boinc_lockfile
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc      2520 Jan 10 08:32 pandaJob.out
[2026-01-10 11:02:05] -rw------- 1 boinc boinc    989374 Jan 10 08:32 agis_schedconf.cvmfs.json
[2026-01-10 11:02:05] -rw------- 1 boinc boinc   1516240 Jan 10 08:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:02:05] drwx------ 5 boinc boinc      4096 Jan 10 08:32 pilot3
[2026-01-10 11:02:05] -rw------- 1 boinc boinc 222616659 Jan 10 10:35 HITS.47898826._038543.pool.root.1
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc       528 Jan 10 10:35 boinc_task_state.xml
[2026-01-10 11:02:05] -rw------- 1 boinc boinc      1023 Jan 10 10:36 memory_monitor_summary.json
[2026-01-10 11:02:05] -rw------- 1 boinc boinc    434873 Jan 10 10:36 log.47898826._038543.job.log.tgz.1
[2026-01-10 11:02:05] -rw------- 1 boinc boinc        95 Jan 10 10:36 pilot_heartbeat.json
[2026-01-10 11:02:05] -rw------- 1 boinc boinc      7778 Jan 10 10:36 heartbeat.json
[2026-01-10 11:02:05] -rw------- 1 boinc boinc      4827 Jan 10 10:37 pilotlog.txt
[2026-01-10 11:02:05] -rw------- 1 boinc boinc   1040707 Jan 10 10:37 log.47898826._038543.job.log.1
[2026-01-10 11:02:05] -rw------- 1 boinc boinc       357 Jan 10 10:37 output.list
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:37 runtime_log
[2026-01-10 11:02:05] -rw------- 1 boinc boinc   1495040 Jan 10 10:37 result.tar.gz
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc      8880 Jan 10 10:37 runtime_log.err
[2026-01-10 11:02:05] -rw------- 1 boinc boinc       663 Jan 10 10:37 pGzMDmYFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7AhKDmYW0KEn.diag
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc        26 Jan 10 11:02 wrapper_checkpoint.txt
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:02 boinc_mmap_file
[2026-01-10 11:02:05] -rw-r--r-- 1 boinc boinc     21486 Jan 10 11:02 stderr.txt
[2026-01-10 11:02:05] HITS file was successfully produced:
[2026-01-10 11:02:05] -rw------- 1 boinc boinc 222616659 Jan 10 10:35 shared/HITS.pool.root.1
[2026-01-10 11:02:05]  *** Contents of shared directory: ***
[2026-01-10 11:02:05] total 440472
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc 226309977 Jan 10 08:31 ATLAS.root_0
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 11:02:05] -rw-r--r-- 2 boinc boinc    592405 Jan 10 08:31 input.tar.gz
[2026-01-10 11:02:05] -rw------- 1 boinc boinc 222616659 Jan 10 10:35 HITS.pool.root.1
[2026-01-10 11:02:05] -rw------- 1 boinc boinc   1495040 Jan 10 10:37 result.tar.gz
11:02:07 (2959089): run_atlas exited; CPU time 54568.988491
11:02:07 (2959089): called boinc_finish(0)

</stderr_txt>
]]>

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