Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 00:47:40 (4992): vboxwrapper version 26210
2026-01-10 00:47:40 (4992): BOINC client version: 8.2.8
2026-01-10 00:47:41 (4992): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-01-10 00:47:41 (4992): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 00:47:42 (4992): Create VM. (boinc_36f160b3f6861162, slot#5)
2026-01-10 00:47:42 (4992): Setting Memory Size for VM. (4800MB)
2026-01-10 00:47:43 (4992): Setting CPU Count for VM. (8)
2026-01-10 00:47:43 (4992): Setting Chipset Options for VM.
2026-01-10 00:47:43 (4992): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 00:47:44 (4992): Setting Boot Options for VM.
2026-01-10 00:47:44 (4992): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 00:47:45 (4992): Enabling VM Network Access.
2026-01-10 00:47:45 (4992): Disabling USB Support for VM.
2026-01-10 00:47:45 (4992): Disabling COM Port Support for VM.
2026-01-10 00:47:46 (4992): Disabling LPT Port Support for VM.
2026-01-10 00:47:46 (4992): Disabling Audio Support for VM.
2026-01-10 00:47:46 (4992): Disabling Clipboard Support for VM.
2026-01-10 00:47:46 (4992): Disabling Drag and Drop Support for VM.
2026-01-10 00:47:47 (4992): Adding storage controller(s) to VM.
2026-01-10 00:47:47 (4992): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 00:47:47 (4992): Adding VirtualBox Guest Additions to VM.
2026-01-10 00:47:48 (4992): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 00:47:48 (4992): forwarding host port 60596 to guest port 80
2026-01-10 00:47:48 (4992): Enabling remote desktop for VM.
2026-01-10 00:47:48 (4992): Required extension pack not installed, remote desktop not enabled.
2026-01-10 00:47:48 (4992): Enabling shared directory for VM.
2026-01-10 00:47:49 (4992): Starting VM using VBoxManage interface. (boinc_36f160b3f6861162, slot#5)
2026-01-10 00:47:56 (4992): Successfully started VM. (PID = '9968')
2026-01-10 00:47:56 (4992): Reporting VM Process ID to BOINC.
2026-01-10 00:47:56 (4992): Guest Log: BIOS: VirtualBox 7.1.10
2026-01-10 00:47:56 (4992): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 00:47:56 (4992): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 00:47:56 (4992): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 00:47:56 (4992): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 00:47:56 (4992): Detected: Web Application Enabled (http://localhost:60596)
2026-01-10 00:47:56 (4992): Preference change detected
2026-01-10 00:47:56 (4992): Setting CPU throttle for VM. (100%)
2026-01-10 00:47:57 (4992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 00:47:58 (4992): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 00:47:58 (4992): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 00:48:01 (4992): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 00:48:01 (4992): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 00:48:01 (4992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 00:48:08 (4992): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 00:48:08 (4992): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 00:48:16 (4992): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000330 main     Log opened 2026-01-10T00:48:14.125183000Z
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000598 main     OS Product: Linux
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000662 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000721 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000780 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000781 main     Process ID: 1376
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.000782 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 00:48:16 (4992): Guest Log: 00:00:00.002249 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 00:48:16 (4992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 00:48:16 (4992): Guest Log: [INFO] Mounting shared directory
2026-01-10 00:48:16 (4992): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 00:48:26 (4992): Guest Log: 00:00:10.019556 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 203 261 000ns (GuestNow=1 768 002 505 926 022 000 ns GuestLast=1 768 006 094 129 283 000 ns fSetTimeLastLoop=true )
2026-01-10 00:49:12 (4992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 00:49:12 (4992): Guest Log: [INFO] Detected branch: prod
2026-01-10 00:49:12 (4992): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 00:49:12 (4992): Guest Log: Copying input files
2026-01-10 00:49:14 (4992): Guest Log: Copied input files into RunAtlas.
2026-01-10 00:49:14 (4992): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 00:49:14 (4992): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 00:49:14 (4992): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 00:49:14 (4992): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 00:49:23 (4992): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 00:49:23 (4992): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 00:49:23 (4992): Guest Log: 2.6.3.0 1680 0 30160 154961 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 00:49:24 (4992): Guest Log: copied the webapp to /var/www
2026-01-10 00:49:24 (4992): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-10 00:49:24 (4992): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-10 00:49:25 (4992): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 00:49:25 (4992): Guest Log:  *** Starting ATLAS job. (PandaID=6963188301 taskID=47898826) ***
2026-01-10 02:28:01 (4992): Status Report: Elapsed Time: '6000.000000'
2026-01-10 02:28:01 (4992): Status Report: CPU Time: '42216.218750'
2026-01-10 04:08:06 (4992): Status Report: Elapsed Time: '12000.000000'
2026-01-10 04:08:06 (4992): Status Report: CPU Time: '89936.781250'
2026-01-10 05:00:20 (4992): Guest Log:  *** Job finished ***
2026-01-10 05:00:20 (4992): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:02,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:02,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:11,483 | INFO     | [monitor] cgroup control has ended
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:12,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708903278400)>', '<ExcThread(monitor, started 140708463752960)>']
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:12,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:12,685 | INFO     | [monitor] control thread has ended
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,300 | INFO     | all workflow threads have been joined
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,300 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,301 | INFO     | traces error code: 0
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,382 [wrapper] ==== pilot stdout END ====
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,390 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,399 [wrapper] pilotpid: 6107
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,406 [wrapper] Pilot exit status: 0
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,532 [wrapper] pandaids: 6963188301
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,585 [wrapper] cleanup supervisor_pilot 14165 6108
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,593 [wrapper] Test setup, not cleaning
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,611 [wrapper] apfmon messages muted
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,617 [wrapper] ==== wrapper stdout END ====
2026-01-10 05:00:20 (4992): Guest Log: 2026-01-10 04:00:17,625 [wrapper] ==== wrapper stderr END ====
2026-01-10 05:00:20 (4992): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 05:00:20 (4992): Guest Log:     "exeErrorCode": 0,
2026-01-10 05:00:20 (4992): Guest Log:     "exeErrorDiag": "",
2026-01-10 05:00:20 (4992): Guest Log:     "pilotErrorCode": 0,
2026-01-10 05:00:20 (4992): Guest Log:     "pilotErrorDiag": "",
2026-01-10 05:00:20 (4992): Guest Log:  *** Listing of results directory ***
2026-01-10 05:00:20 (4992): Guest Log: total 228260
2026-01-10 05:00:20 (4992): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 04:21 pilot3.tar.gz
2026-01-10 05:00:20 (4992): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 04:25 runpilot2-wrapper.sh
2026-01-10 05:00:20 (4992): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 04:29 queuedata.json
2026-01-10 05:00:20 (4992): Guest Log: -rwxr-xr-x. 1 atlas atlas      8757 Jan  9 23:49 init_data.xml
2026-01-10 05:00:20 (4992): Guest Log: -rwxr-xr-x. 1 atlas atlas    592399 Jan  9 23:49 input.tar.gz
2026-01-10 05:00:20 (4992): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  9 23:49 start_atlas.sh
2026-01-10 05:00:20 (4992): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 23:49 EVNT.47898824._001437.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 05:00:20 (4992): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan  9 23:49 pandaJob.out
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas    989374 Jan  9 23:50 agis_schedconf.cvmfs.json
2026-01-10 05:00:20 (4992): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 23:50 pilot3
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas 225118343 Jan 10 03:58 HITS.47898826._037453.pool.root.1
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 03:59 pilot_heartbeat.json
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas      1035 Jan 10 03:59 memory_monitor_summary.json
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 03:59 agis_ddmendpoints.agis.ALL.json
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas    450805 Jan 10 03:59 log.47898826._037453.job.log.tgz.1
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas      7797 Jan 10 03:59 heartbeat.json
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas      4877 Jan 10 04:00 pilotlog.txt
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas   1935779 Jan 10 04:00 log.47898826._037453.job.log.1
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 04:00 output.list
2026-01-10 05:00:20 (4992): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 04:00 runtime_log
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas   2406400 Jan 10 04:00 result.tar.gz
2026-01-10 05:00:20 (4992): Guest Log: -rw-r--r--. 1 atlas atlas      8777 Jan 10 04:00 runtime_log.err
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas       656 Jan 10 04:00 3D7KDm8EJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg7gKDmT8vGNn.diag
2026-01-10 05:00:20 (4992): Guest Log: Looking for outputfile HITS.47898826._037453.pool.root.1
2026-01-10 05:00:20 (4992): Guest Log: HITS file was successfully produced
2026-01-10 05:00:20 (4992): Guest Log: -rw-------. 1 atlas atlas 225118343 Jan 10 03:58 /home/atlas/RunAtlas/HITS.47898826._037453.pool.root.1
2026-01-10 05:00:22 (4992): Guest Log: Successfully finished the ATLAS job!
2026-01-10 05:00:22 (4992): Guest Log: Copying the results back to the shared directory!
2026-01-10 05:00:22 (4992): Guest Log:  *** Contents of shared directory: ***
2026-01-10 05:00:22 (4992): Guest Log: total 440096
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root 222504419 Jan  9 23:47 ATLAS.root_0
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root 225118343 Jan 10 04:00 HITS.pool.root.1
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root      8757 Jan  9 23:47 init_data.xml
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root    592399 Jan  9 20:54 input.tar.gz
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root   2406400 Jan 10 04:00 result.tar.gz
2026-01-10 05:00:22 (4992): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 20:54 start_atlas.sh
2026-01-10 05:00:22 (4992): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 05:00:22 (4992): VM Completion File Detected.
2026-01-10 05:00:22 (4992): Powering off VM.
2026-01-10 05:00:23 (4992): Successfully stopped VM.
2026-01-10 05:00:23 (4992): Deregistering VM. (boinc_36f160b3f6861162, slot#5)
2026-01-10 05:00:23 (4992): Removing network bandwidth throttle group from VM.
2026-01-10 05:00:23 (4992): Removing VM from VirtualBox.
2026-01-10 05:00:28 (4992): called boinc_finish(0)

</stderr_txt>
]]>

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