Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 21:10:50 (13412): vboxwrapper version 26210
2026-01-09 21:10:50 (13412): BOINC client version: 8.0.2
2026-01-09 21:10:50 (13412): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2026-01-09 21:10:51 (13412): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 21:10:51 (13412): Create VM. (boinc_0ce4e6712dca02b1, slot#0)
2026-01-09 21:10:51 (13412): Setting Memory Size for VM. (4300MB)
2026-01-09 21:10:52 (13412): Setting CPU Count for VM. (3)
2026-01-09 21:10:52 (13412): Setting Chipset Options for VM.
2026-01-09 21:10:52 (13412): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 21:10:53 (13412): Setting Boot Options for VM.
2026-01-09 21:10:53 (13412): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 21:10:53 (13412): Enabling VM Network Access.
2026-01-09 21:10:54 (13412): Disabling USB Support for VM.
2026-01-09 21:10:54 (13412): Disabling COM Port Support for VM.
2026-01-09 21:10:54 (13412): Disabling LPT Port Support for VM.
2026-01-09 21:10:54 (13412): Disabling Audio Support for VM.
2026-01-09 21:10:55 (13412): Disabling Clipboard Support for VM.
2026-01-09 21:10:55 (13412): Disabling Drag and Drop Support for VM.
2026-01-09 21:10:55 (13412): Adding storage controller(s) to VM.
2026-01-09 21:10:55 (13412): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 21:10:58 (13412): Adding VirtualBox Guest Additions to VM.
2026-01-09 21:10:58 (13412): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 21:10:58 (13412): forwarding host port 52595 to guest port 80
2026-01-09 21:10:58 (13412): Enabling remote desktop for VM.
2026-01-09 21:10:59 (13412): Required extension pack not installed, remote desktop not enabled.
2026-01-09 21:10:59 (13412): Enabling shared directory for VM.
2026-01-09 21:10:59 (13412): Starting VM using VBoxManage interface. (boinc_0ce4e6712dca02b1, slot#0)
2026-01-09 21:11:04 (13412): Successfully started VM. (PID = '10392')
2026-01-09 21:11:04 (13412): Reporting VM Process ID to BOINC.
2026-01-09 21:11:04 (13412): Guest Log: BIOS: VirtualBox 7.0.10
2026-01-09 21:11:04 (13412): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 21:11:04 (13412): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 21:11:04 (13412): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 21:11:04 (13412): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 21:11:04 (13412): Detected: Web Application Enabled (http://localhost:52595)
2026-01-09 21:11:04 (13412): Preference change detected
2026-01-09 21:11:04 (13412): Setting CPU throttle for VM. (100%)
2026-01-09 21:11:04 (13412): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 21:11:06 (13412): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 21:11:06 (13412): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 21:11:09 (13412): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 21:11:09 (13412): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 21:11:09 (13412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 21:11:14 (13412): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 21:11:14 (13412): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 21:11:18 (13412): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000078 main     Log opened 2026-01-09T21:11:16.136031000Z
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000136 main     OS Product: Linux
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000156 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000171 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000185 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000185 main     Process ID: 1286
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.000186 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 21:11:18 (13412): Guest Log: 00:00:00.001270 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 21:11:18 (13412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 21:11:18 (13412): Guest Log: [INFO] Mounting shared directory
2026-01-09 21:11:18 (13412): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 21:11:21 (13412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 21:11:21 (13412): Guest Log: [INFO] Detected branch: prod
2026-01-09 21:11:21 (13412): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 21:11:21 (13412): Guest Log: Copying input files
2026-01-09 21:11:22 (13412): Guest Log: Copied input files into RunAtlas.
2026-01-09 21:11:22 (13412): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 21:11:22 (13412): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 21:11:22 (13412): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 21:11:22 (13412): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 21:11:28 (13412): Guest Log: 00:00:10.003453 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 519 672 000ns (GuestNow=1 767 989 487 618 834 000 ns GuestLast=1 767 993 076 138 506 000 ns fSetTimeLastLoop=true )
2026-01-09 21:11:31 (13412): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 21:11:31 (13412): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 21:11:31 (13412): Guest Log: 2.6.3.0 1559 0 32328 154956 4 1 3120734 4096000 0 65024 0 0 n/a 1336 597 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 21:11:31 (13412): Guest Log: copied the webapp to /var/www
2026-01-09 21:11:31 (13412): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-09 21:11:31 (13412): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-09 21:11:31 (13412): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 21:11:31 (13412): Guest Log:  *** Starting ATLAS job. (PandaID=6963188668 taskID=47898826) ***
2026-01-09 22:51:08 (13412): Status Report: Elapsed Time: '6000.000000'
2026-01-09 22:51:08 (13412): Status Report: CPU Time: '16897.578125'
2026-01-09 23:27:11 (13412): Guest Log:  *** Job finished ***
2026-01-09 23:27:11 (13412): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:07,930 | INFO     | all workflow threads have been joined
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:07,930 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:07,931 | INFO     | traces error code: 0
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:07,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | INFO     | PID=5947 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | INFO     | found 0 job(s) in 20 queues
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,365 | INFO     | [monitor] control thread has ended
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,456 [wrapper] ==== pilot stdout END ====
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,458 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 23:27:11 (13412): Guest Log: 2026-01-09 22:27:11,461 [wrapper] pilotpid: 5947
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,463 [wrapper] Pilot exit status: 0
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,554 [wrapper] pandaids: 6963188668
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,570 [wrapper] cleanup supervisor_pilot  4342 5948
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,573 [wrapper] Test setup, not cleaning
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,576 [wrapper] apfmon messages muted
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,578 [wrapper] ==== wrapper stdout END ====
2026-01-09 23:27:12 (13412): Guest Log: 2026-01-09 22:27:11,580 [wrapper] ==== wrapper stderr END ====
2026-01-09 23:27:12 (13412): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 23:27:12 (13412): Guest Log:     "exeErrorCode": 0,
2026-01-09 23:27:12 (13412): Guest Log:     "exeErrorDiag": "",
2026-01-09 23:27:12 (13412): Guest Log:     "pilotErrorCode": 0,
2026-01-09 23:27:12 (13412): Guest Log:     "pilotErrorDiag": "",
2026-01-09 23:27:12 (13412): Guest Log:  *** Listing of results directory ***
2026-01-09 23:27:12 (13412): Guest Log: total 221876
2026-01-09 23:27:12 (13412): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 04:21 pilot3.tar.gz
2026-01-09 23:27:12 (13412): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 04:25 runpilot2-wrapper.sh
2026-01-09 23:27:12 (13412): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 04:29 queuedata.json
2026-01-09 23:27:12 (13412): Guest Log: -rwxr-xr-x. 1 atlas atlas     12431 Jan  9 20:11 init_data.xml
2026-01-09 23:27:12 (13412): Guest Log: -rwxr-xr-x. 1 atlas atlas    592400 Jan  9 20:11 input.tar.gz
2026-01-09 23:27:12 (13412): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  9 20:11 start_atlas.sh
2026-01-09 23:27:12 (13412): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 20:11 EVNT.47898824._001449.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 23:27:12 (13412): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan  9 20:11 pandaJob.out
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas    989381 Jan  9 20:12 agis_schedconf.cvmfs.json
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 20:12 agis_ddmendpoints.agis.ALL.json
2026-01-09 23:27:12 (13412): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 20:12 pilot3
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas 220550281 Jan  9 22:26 HITS.47898826._037755.pool.root.1
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas      1036 Jan  9 22:26 memory_monitor_summary.json
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas    287809 Jan  9 22:26 log.47898826._037755.job.log.tgz.1
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 22:26 pilot_heartbeat.json
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas      7837 Jan  9 22:26 heartbeat.json
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas       744 Jan  9 22:27 pilotlog.txt
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas   1112506 Jan  9 22:27 log.47898826._037755.job.log.1
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 22:27 output.list
2026-01-09 23:27:12 (13412): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 22:27 runtime_log
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas   1423360 Jan  9 22:27 result.tar.gz
2026-01-09 23:27:12 (13412): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Jan  9 22:27 runtime_log.err
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas       656 Jan  9 22:27 kfPODm8EJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzKmKDmuFBjhn.diag
2026-01-09 23:27:12 (13412): Guest Log: Looking for outputfile HITS.47898826._037755.pool.root.1
2026-01-09 23:27:12 (13412): Guest Log: HITS file was successfully produced
2026-01-09 23:27:12 (13412): Guest Log: -rw-------. 1 atlas atlas 220550281 Jan  9 22:26 /home/atlas/RunAtlas/HITS.47898826._037755.pool.root.1
2026-01-09 23:27:12 (13412): Guest Log: Successfully finished the ATLAS job!
2026-01-09 23:27:12 (13412): Guest Log: Copying the results back to the shared directory!
2026-01-09 23:27:12 (13412): Guest Log:  *** Contents of shared directory: ***
2026-01-09 23:27:12 (13412): Guest Log: total 436376
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root 224240610 Jan  9 20:10 ATLAS.root_0
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root 220550281 Jan  9 22:27 HITS.pool.root.1
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root     12431 Jan  9 20:10 init_data.xml
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root    592400 Jan  9 20:07 input.tar.gz
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root   1423360 Jan  9 22:27 result.tar.gz
2026-01-09 23:27:12 (13412): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 20:07 start_atlas.sh
2026-01-09 23:27:12 (13412): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 23:27:12 (13412): VM Completion File Detected.
2026-01-09 23:27:12 (13412): Powering off VM.
2026-01-09 23:27:13 (13412): Successfully stopped VM.
2026-01-09 23:27:13 (13412): Deregistering VM. (boinc_0ce4e6712dca02b1, slot#0)
2026-01-09 23:27:13 (13412): Removing network bandwidth throttle group from VM.
2026-01-09 23:27:13 (13412): Removing VM from VirtualBox.
2026-01-09 23:27:18 (13412): called boinc_finish(0)

</stderr_txt>
]]>

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