Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:52:20 (2907754): wrapper (7.7.26015): starting
09:52:20 (2907754): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 09:52:20] Arguments: --nthreads 6
[2026-01-10 09:52:20] Threads: 6
[2026-01-10 09:52:20] Checking for CVMFS
[2026-01-10 09:52:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:52:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:52:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:52:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:52:21] 2.13.3.0 2126625 1175 77908 154962 1 253 47018632 52428800 1845 130560 0 2507944 99.996 42690 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 09:52:21] CVMFS is ok
[2026-01-10 09:52:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:52:21] Checking for apptainer binary...
[2026-01-10 09:52:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:52:21] Running /usr/bin/apptainer --version
[2026-01-10 09:52:21] apptainer version 1.4.4-1.el9
[2026-01-10 09:52:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:52:21] testio008
[2026-01-10 09:52:21] apptainer works
[2026-01-10 09:52:21] Set ATHENA_PROC_NUMBER=6
[2026-01-10 09:52:21] Set ATHENA_CORE_NUMBER=6
[2026-01-10 09:52:21] Starting ATLAS job with PandaID=6963160892
[2026-01-10 09:52:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:26:44]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:26:44] 2026-01-10 02:25:37,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:37,525 | INFO     | PID=2911532 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:26:44] 2026-01-10 02:25:37,525 | INFO     | .. there are 3 such processes running
[2026-01-10 11:26:44] 2026-01-10 02:25:38,525 | INFO     | time since job start (5589s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:39,802 | INFO     | monitor loop #433: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:39,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:40,530 | INFO     | time since job start (5591s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:42,304 | INFO     | monitor loop #434: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:42,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:42,535 | INFO     | time since job start (5593s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:44,540 | INFO     | time since job start (5595s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:44,807 | INFO     | monitor loop #435: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:44,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:46,546 | INFO     | time since job start (5597s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:47,310 | INFO     | monitor loop #436: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:47,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:48,550 | INFO     | time since job start (5599s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:49,812 | INFO     | monitor loop #437: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:49,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:50,555 | INFO     | time since job start (5601s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:52,314 | INFO     | monitor loop #438: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:52,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:52,561 | INFO     | time since job start (5603s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:54,566 | INFO     | time since job start (5605s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:54,817 | INFO     | monitor loop #439: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:54,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:56,571 | INFO     | time since job start (5607s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:57,319 | INFO     | monitor loop #440: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:57,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:25:58,576 | INFO     | time since job start (5609s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:25:59,622 | INFO     | PID=2911532 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:26:44] 2026-01-10 02:25:59,623 | INFO     | .. there are 3 such processes running
[2026-01-10 11:26:44] 2026-01-10 02:25:59,822 | INFO     | monitor loop #441: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:25:59,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:26:00,623 | INFO     | time since job start (5611s) is within the limit (349056.0s)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,325 | INFO     | monitor loop #442: job 0:6963160892 is in state 'finished'
[2026-01-10 11:26:44] 2026-01-10 02:26:02,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,460 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:26:44] 2026-01-10 02:26:02,462 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 1996.01325
[2026-01-10 11:26:44] 2026-01-10 02:26:02,466 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963160892/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,466 | INFO     | extracted standard info from prmon json
[2026-01-10 11:26:44] 2026-01-10 02:26:02,466 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:26:44] 2026-01-10 02:26:02,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:26:44] 2026-01-10 02:26:02,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:26:44] 2026-01-10 02:26:02,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | sum of square deviations: 183761585.0
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | sum of deviations: -4893694408.5
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | mean x: 1768009204.5
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | mean y: 2481105.3928571427
[2026-01-10 11:26:44] 2026-01-10 02:26:02,469 | INFO     | intersect: 47085753478.332954
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | chi2: 0.046506152152591004
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | current memory leak: -26.63 B/s (using 84 data points, chi2=0.05)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | could have reported an average CPU frequency of 3296 MHz (7 samples)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | ..............................
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . Timing measurements:
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . get job = 0 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . initial setup = 4 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . payload setup = 3 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . stage-in = 0 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . payload execution = 5520 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,470 | INFO     | . stage-out = 0 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,471 | INFO     | . log creation = 0 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,471 | INFO     | ..............................
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | 
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | job summary report
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | --------------------------------------------------
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | PanDA job id: 6963160892
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | task id: 47898826
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | errors: (none)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:26:44] 2026-01-10 02:26:02,559 | INFO     | pilot state: finished 
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | transexitcode: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | exeerrorcode: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | exeerrordiag: 
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | exitcode: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | exitmsg: OK
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | cpuconsumptiontime: 30296 s
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | nevents: 400
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | neventsw: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | pid: 2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | pgrp: 2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | corecount: 6
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | event service: False
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | sizes: {0: 2283800, 1: 2283999, 3: 2284261, 11: 2284289, 5527: 2311102, 5528: 2320100, 5531: 2320284, 5599: 2320308}
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | --------------------------------------------------
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | 
[2026-01-10 11:26:44] 2026-01-10 02:26:02,560 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | job 6963160892 has completed (purged errors)
[2026-01-10 11:26:44] 2026-01-10 02:26:02,576 | INFO     | overall cleanup function is called
[2026-01-10 11:26:44] 2026-01-10 02:26:03,583 | INFO     | --- collectZombieJob: --- 10, [2918251]
[2026-01-10 11:26:44] 2026-01-10 02:26:03,583 | INFO     | zombie collector waiting for pid 2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:03,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:26:44] 2026-01-10 02:26:03,583 | INFO     | collected zombie processes
[2026-01-10 11:26:44] 2026-01-10 02:26:03,583 | INFO     | will attempt to kill all subprocesses of pid=2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:03,617 | INFO     | process IDs to be killed: [2918251] (in reverse order)
[2026-01-10 11:26:44] 2026-01-10 02:26:03,636 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:26:44] 2026-01-10 02:26:03,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:26:44] 2026-01-10 02:26:03,637 | INFO     | did not find any defunct processes belonging to 2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:03,639 | INFO     | did not find any defunct processes belonging to 2918251
[2026-01-10 11:26:44] 2026-01-10 02:26:03,639 | INFO     | ready for new job
[2026-01-10 11:26:44] 2026-01-10 02:26:03,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | ***************************************
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | ***************************************
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | 
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | architecture information:
[2026-01-10 11:26:44] 2026-01-10 02:26:03,640 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:26:44] 2026-01-10 02:26:03,646 | INFO     | cat /etc/os-release:
[2026-01-10 11:26:44] NAME="CentOS Linux"
[2026-01-10 11:26:44] VERSION="7 (Core)"
[2026-01-10 11:26:44] ID="centos"
[2026-01-10 11:26:44] ID_LIKE="rhel fedora"
[2026-01-10 11:26:44] VERSION_ID="7"
[2026-01-10 11:26:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:26:44] ANSI_COLOR="0;31"
[2026-01-10 11:26:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:26:44] HOME_URL="https://www.centos.org/"
[2026-01-10 11:26:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:26:44] 
[2026-01-10 11:26:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:26:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:26:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:26:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:26:44] 
[2026-01-10 11:26:44] 2026-01-10 02:26:03,647 | INFO     | ***************************************
[2026-01-10 11:26:44] 2026-01-10 02:26:04,150 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-10 11:26:44] 2026-01-10 02:26:04,156 | INFO     | sufficient remaining disk space (278640197632 B)
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | INFO     | update_server=False
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:26:44] 2026-01-10 02:26:04,157 | INFO     | aborting loop
[2026-01-10 11:26:44] 2026-01-10 02:26:04,527 | INFO     | all data control threads have been joined
[2026-01-10 11:26:44] 2026-01-10 02:26:04,611 | INFO     | all job control threads have been joined
[2026-01-10 11:26:44] 2026-01-10 02:26:05,000 | INFO     | all payload control threads have been joined
[2026-01-10 11:26:44] 2026-01-10 02:26:05,161 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,162 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,162 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,434 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,531 | INFO     | [data] control thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,616 | INFO     | [job] control thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:05,918 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,005 | INFO     | [payload] control thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,162 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,165 | INFO     | [job] validate thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,180 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,329 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:06,378 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:07,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:26:44] 2026-01-10 02:26:11,522 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:14,730 | INFO     | job.realtimelogging is not enabled
[2026-01-10 11:26:44] 2026-01-10 02:26:15,735 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:26:44] 2026-01-10 02:26:33,724 | INFO     | PID=2911532 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:26:44] 2026-01-10 02:26:33,724 | INFO     | .. there are 3 such processes running
[2026-01-10 11:26:44] 2026-01-10 02:26:33,725 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:26:44] 2026-01-10 02:26:33,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:26:44] 2026-01-10 02:26:33,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:26:44] 2026-01-10 02:26:38,316 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:26:44] 2026-01-10 02:26:39,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508970370880)>', '<ExcThread(monitor, started 140508445800192)>']
[2026-01-10 11:26:44] 2026-01-10 02:26:39,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:26:44] 2026-01-10 02:26:39,755 | INFO     | [monitor] control thread has ended
[2026-01-10 11:26:44] 2026-01-10 02:26:44,725 | INFO     | all workflow threads have been joined
[2026-01-10 11:26:44] 2026-01-10 02:26:44,725 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:26:44] 2026-01-10 02:26:44,725 | INFO     | traces error code: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:44,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:26:44] 2026-01-10 02:26:44,778 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:26:44] 2026-01-10 02:26:44,779 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:26:44] 2026-01-10 02:26:44,780 [wrapper] pilotpid: 2911532
[2026-01-10 11:26:44] 2026-01-10 02:26:44,780 [wrapper] Pilot exit status: 0
[2026-01-10 11:26:44] 2026-01-10 02:26:44,784 [wrapper] pandaids: 6963160892
[2026-01-10 11:26:44] 2026-01-10 02:26:44,794 [wrapper] cleanup supervisor_pilot 2980706 2911533
[2026-01-10 11:26:44] 2026-01-10 02:26:44,795 [wrapper] Test setup, not cleaning
[2026-01-10 11:26:44] 2026-01-10 02:26:44,796 [wrapper] apfmon messages muted
[2026-01-10 11:26:44] 2026-01-10 02:26:44,797 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:26:44] 2026-01-10 02:26:44,798 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:26:44]  *** Error codes and diagnostics ***
[2026-01-10 11:26:44]     "exeErrorCode": 0,
[2026-01-10 11:26:44]     "exeErrorDiag": "",
[2026-01-10 11:26:44]     "pilotErrorCode": 0,
[2026-01-10 11:26:44]     "pilotErrorDiag": "",
[2026-01-10 11:26:44]  *** Listing of results directory ***
[2026-01-10 11:26:44] total 438652
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc    579449 Jan  9 06:44 pilot3.tar.gz
[2026-01-10 11:26:44] -rwx------. 1 boinc boinc     36322 Jan  9 06:46 runpilot2-wrapper.sh
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc      5112 Jan  9 06:47 queuedata.json
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc       100 Jan 10 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:26:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 09:52 run_atlas
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc       105 Jan 10 09:52 job.xml
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:52 start_atlas.sh
[2026-01-10 11:26:44] drwxrwx--x. 2 boinc boinc        68 Jan 10 09:52 shared
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc    592403 Jan 10 09:52 input.tar.gz
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc      9525 Jan 10 09:52 init_data.xml
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc 224666230 Jan 10 09:52 EVNT.47898824._001264.pool.root.1
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc         0 Jan 10 09:52 boinc_lockfile
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc      2520 Jan 10 09:52 pandaJob.out
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc    989374 Jan 10 09:52 agis_schedconf.cvmfs.json
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc   1516240 Jan 10 09:52 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:26:44] drwx------. 5 boinc boinc      4096 Jan 10 09:52 pilot3
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc 218326758 Jan 10 11:24 HITS.47898826._032715.pool.root.1
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc       529 Jan 10 11:24 boinc_task_state.xml
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc      1018 Jan 10 11:24 memory_monitor_summary.json
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc    312724 Jan 10 11:24 log.47898826._032715.job.log.tgz.1
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc      7760 Jan 10 11:26 heartbeat.json
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc        95 Jan 10 11:26 pilot_heartbeat.json
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc      8192 Jan 10 11:26 boinc_mmap_file
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc        27 Jan 10 11:26 wrapper_checkpoint.txt
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc      4896 Jan 10 11:26 pilotlog.txt
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc    827611 Jan 10 11:26 log.47898826._032715.job.log.1
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc       357 Jan 10 11:26 output.list
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc       620 Jan 10 11:26 runtime_log
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc   1157120 Jan 10 11:26 result.tar.gz
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc      8775 Jan 10 11:26 runtime_log.err
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc       642 Jan 10 11:26 Az8NDmq0Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTSlKDm5BtcCn.diag
[2026-01-10 11:26:44] -rw-r--r--. 1 boinc boinc     22100 Jan 10 11:26 stderr.txt
[2026-01-10 11:26:44] HITS file was successfully produced:
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc 218326758 Jan 10 11:24 shared/HITS.pool.root.1
[2026-01-10 11:26:44]  *** Contents of shared directory: ***
[2026-01-10 11:26:44] total 434344
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:52 start_atlas.sh
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc    592403 Jan 10 09:52 input.tar.gz
[2026-01-10 11:26:44] -rw-r--r--. 2 boinc boinc 224666230 Jan 10 09:52 ATLAS.root_0
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc 218326758 Jan 10 11:24 HITS.pool.root.1
[2026-01-10 11:26:44] -rw-------. 1 boinc boinc   1157120 Jan 10 11:26 result.tar.gz
11:26:46 (2907754): run_atlas exited; CPU time 30336.988914
11:26:46 (2907754): called boinc_finish(0)

</stderr_txt>
]]>

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