Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:18:34 (13977): wrapper (7.7.26015): starting
02:18:34 (13977): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 02:18:34] Arguments: --nthreads 8
[2026-01-10 02:18:34] Threads: 8
[2026-01-10 02:18:34] Checking for CVMFS
[2026-01-10 02:18:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:18:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:18:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:18:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:18:38] 2.11.2.0 31778 4442 74668 154963 2 60 17031547 25165824 899 130560 0 1111887 99.604 271420 891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 02:18:38] CVMFS is ok
[2026-01-10 02:18:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:18:38] Checking for apptainer binary...
[2026-01-10 02:18:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 02:18:38] Running /usr/bin/apptainer --version
[2026-01-10 02:18:38] apptainer version 1.3.2-1.el7
[2026-01-10 02:18:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:19:03] cg-vwn373.simple-grid.lan
[2026-01-10 02:19:03] apptainer works
[2026-01-10 02:19:03] Set ATHENA_PROC_NUMBER=8
[2026-01-10 02:19:03] Set ATHENA_CORE_NUMBER=8
[2026-01-10 02:19:03] Starting ATLAS job with PandaID=6963155900
[2026-01-10 02:19:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:28:00]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:28:00] 2026-01-10 07:26:51,158 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 08:28:00] 2026-01-10 07:26:51,160 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963155900/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,160 | INFO     | extracted standard info from prmon json
[2026-01-10 08:28:00] 2026-01-10 07:26:51,161 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:28:00] 2026-01-10 07:26:51,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:28:00] 2026-01-10 07:26:51,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:28:00] 2026-01-10 07:26:51,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:28:00] 2026-01-10 07:26:51,169 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:28:00] 2026-01-10 07:26:51,170 | INFO     | sum of square deviations: 12955770358.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,174 | INFO     | sum of deviations: 156978324271.99988
[2026-01-10 08:28:00] 2026-01-10 07:26:51,174 | INFO     | mean x: 1768019287.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,174 | INFO     | mean y: 2449006.1757925074
[2026-01-10 08:28:00] 2026-01-10 07:26:51,174 | INFO     | intersect: -21419720211.45461
[2026-01-10 08:28:00] 2026-01-10 07:26:51,175 | INFO     | chi2: 8.747318410106882
[2026-01-10 08:28:00] 2026-01-10 07:26:51,183 | INFO     | sum of square deviations: 12403750705.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,187 | INFO     | sum of deviations: 177387007957.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,187 | INFO     | mean x: 1768019134.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,187 | INFO     | mean y: 2454569.871345029
[2026-01-10 08:28:00] 2026-01-10 07:26:51,188 | INFO     | intersect: -25282125209.744392
[2026-01-10 08:28:00] 2026-01-10 07:26:51,188 | INFO     | chi2: 8.03472439002566
[2026-01-10 08:28:00] 2026-01-10 07:26:51,188 | INFO     | current chi2=8.03472439002566 (change=8.146428272896427 %)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,188 | INFO     | right removable region: 341
[2026-01-10 08:28:00] 2026-01-10 07:26:51,189 | INFO     | sum of square deviations: 12403750705.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,193 | INFO     | sum of deviations: 35080568537.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,193 | INFO     | mean x: 1768019439.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,193 | INFO     | mean y: 2482666.535087719
[2026-01-10 08:28:00] 2026-01-10 07:26:51,194 | INFO     | intersect: -4997869936.126472
[2026-01-10 08:28:00] 2026-01-10 07:26:51,194 | INFO     | chi2: 3.80856322064235
[2026-01-10 08:28:00] 2026-01-10 07:26:51,194 | INFO     | current chi2=3.80856322064235 (change=56.46021966867198 %)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,195 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,207 | INFO     | sum of deviations: -57233008867.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,207 | INFO     | mean x: 1768019592.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,207 | INFO     | mean y: 2508899.5459940652
[2026-01-10 08:28:00] 2026-01-10 07:26:51,208 | INFO     | intersect: 8528980484.648526
[2026-01-10 08:28:00] 2026-01-10 07:26:51,208 | INFO     | chi2: 1.1067971183518857
[2026-01-10 08:28:00] 2026-01-10 07:26:51,208 | INFO     | current chi2=1.1067971183518857 (change=70.93924784146778 %)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,209 | INFO     | sum of square deviations: 11347200663.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,213 | INFO     | sum of deviations: -71313058360.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,213 | INFO     | mean x: 1768019744.5
[2026-01-10 08:28:00] 2026-01-10 07:26:51,213 | INFO     | mean y: 2513004.3222891567
[2026-01-10 08:28:00] 2026-01-10 07:26:51,213 | INFO     | intersect: 11113878614.799711
[2026-01-10 08:28:00] 2026-01-10 07:26:51,214 | INFO     | chi2: 1.0039691063862093
[2026-01-10 08:28:00] 2026-01-10 07:26:51,214 | INFO     | current chi2=1.0039691063862093 (change=9.290592671473156 %)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,214 | INFO     | left removable region: 30
[2026-01-10 08:28:00] 2026-01-10 07:26:51,215 | INFO     | sum of square deviations: 9327281860.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,218 | INFO     | sum of deviations: -21544227598.999996
[2026-01-10 08:28:00] 2026-01-10 07:26:51,218 | INFO     | mean x: 1768020019.0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,218 | INFO     | mean y: 2511056.9774919613
[2026-01-10 08:28:00] 2026-01-10 07:26:51,218 | INFO     | intersect: 4086297336.9092426
[2026-01-10 08:28:00] 2026-01-10 07:26:51,219 | INFO     | chi2: 0.154672526131186
[2026-01-10 08:28:00] 2026-01-10 07:26:51,219 | INFO     | current memory leak: -2.31 B/s (using 311 data points, chi2=0.15)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,220 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,220 | INFO     | ..............................
[2026-01-10 08:28:00] 2026-01-10 07:26:51,220 | INFO     | . Timing measurements:
[2026-01-10 08:28:00] 2026-01-10 07:26:51,220 | INFO     | . get job = 0 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . initial setup = 10 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . payload setup = 152 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . stage-in = 0 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . payload execution = 21340 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . stage-out = 4 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | . log creation = 1 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,221 | INFO     | ..............................
[2026-01-10 08:28:00] 2026-01-10 07:26:51,371 | INFO     | 
[2026-01-10 08:28:00] 2026-01-10 07:26:51,371 | INFO     | job summary report
[2026-01-10 08:28:00] 2026-01-10 07:26:51,371 | INFO     | --------------------------------------------------
[2026-01-10 08:28:00] 2026-01-10 07:26:51,371 | INFO     | PanDA job id: 6963155900
[2026-01-10 08:28:00] 2026-01-10 07:26:51,371 | INFO     | task id: 47898826
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | errors: (none)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | pilot state: finished 
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | transexitcode: 0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | exeerrorcode: 0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | exeerrordiag: 
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | exitcode: 0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | exitmsg: OK
[2026-01-10 08:28:00] 2026-01-10 07:26:51,372 | INFO     | cpuconsumptiontime: 79998 s
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | nevents: 400
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | neventsw: 0
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | pid: 24194
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | pgrp: 24194
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | corecount: 8
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | event service: False
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | sizes: {0: 2283141, 1: 2283827, 2: 2284026, 13: 2284026, 24: 2284082, 35: 2284110, 45: 2284266, 56: 2284294, 67: 2284322, 78: 2284350, 88: 2284406, 99: 2284714, 10
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | --------------------------------------------------
[2026-01-10 08:28:00] 2026-01-10 07:26:51,373 | INFO     | 
[2026-01-10 08:28:00] 2026-01-10 07:26:51,374 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-10 08:28:00] 2026-01-10 07:26:51,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:28:00] 2026-01-10 07:26:51,399 | INFO     | job 6963155900 has completed (purged errors)
[2026-01-10 08:28:00] 2026-01-10 07:26:51,399 | INFO     | overall cleanup function is called
[2026-01-10 08:28:00] 2026-01-10 07:26:52,408 | INFO     | --- collectZombieJob: --- 10, [24194]
[2026-01-10 08:28:00] 2026-01-10 07:26:52,409 | INFO     | zombie collector waiting for pid 24194
[2026-01-10 08:28:00] 2026-01-10 07:26:52,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:28:00] 2026-01-10 07:26:52,409 | INFO     | collected zombie processes
[2026-01-10 08:28:00] 2026-01-10 07:26:52,409 | INFO     | will attempt to kill all subprocesses of pid=24194
[2026-01-10 08:28:00] 2026-01-10 07:26:52,490 | INFO     | process IDs to be killed: [24194] (in reverse order)
[2026-01-10 08:28:00] 2026-01-10 07:26:53,464 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:28:00] 2026-01-10 07:26:53,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:28:00] 2026-01-10 07:26:53,466 | INFO     | did not find any defunct processes belonging to 24194
[2026-01-10 08:28:00] 2026-01-10 07:26:53,468 | INFO     | did not find any defunct processes belonging to 24194
[2026-01-10 08:28:00] 2026-01-10 07:26:53,468 | INFO     | ready for new job
[2026-01-10 08:28:00] 2026-01-10 07:26:53,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:28:00] 2026-01-10 07:26:53,471 | INFO     | ***************************************
[2026-01-10 08:28:00] 2026-01-10 07:26:53,471 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:28:00] 2026-01-10 07:26:53,471 | INFO     | ***************************************
[2026-01-10 08:28:00] 2026-01-10 07:26:53,471 | INFO     | 
[2026-01-10 08:28:00] 2026-01-10 07:26:53,472 | INFO     | pilot is running in a VM
[2026-01-10 08:28:00] 2026-01-10 07:26:53,472 | INFO     | architecture information:
[2026-01-10 08:28:00] 2026-01-10 07:26:53,474 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:28:00] 2026-01-10 07:26:53,712 | INFO     | cat /etc/os-release:
[2026-01-10 08:28:00] NAME="CentOS Linux"
[2026-01-10 08:28:00] VERSION="7 (Core)"
[2026-01-10 08:28:00] ID="centos"
[2026-01-10 08:28:00] ID_LIKE="rhel fedora"
[2026-01-10 08:28:00] VERSION_ID="7"
[2026-01-10 08:28:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:28:00] ANSI_COLOR="0;31"
[2026-01-10 08:28:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:28:00] HOME_URL="https://www.centos.org/"
[2026-01-10 08:28:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:28:00] 
[2026-01-10 08:28:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:28:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:28:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:28:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:28:00] 
[2026-01-10 08:28:00] 2026-01-10 07:26:53,712 | INFO     | ***************************************
[2026-01-10 08:28:00] 2026-01-10 07:26:54,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-10 08:28:00] 2026-01-10 07:26:54,424 | INFO     | sufficient remaining disk space (497232642048 B)
[2026-01-10 08:28:00] 2026-01-10 07:26:54,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:28:00] 2026-01-10 07:26:54,424 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:28:00] 2026-01-10 07:26:54,424 | INFO     | update_server=False
[2026-01-10 08:28:00] 2026-01-10 07:26:54,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:28:00] 2026-01-10 07:26:54,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:28:00] 2026-01-10 07:26:54,532 | INFO     | all data control threads have been joined
[2026-01-10 08:28:00] 2026-01-10 07:26:54,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 08:28:00] 2026-01-10 07:26:54,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 08:28:00] 2026-01-10 07:26:54,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:28:00] 2026-01-10 07:26:54,647 | INFO     | will abort loop
[2026-01-10 08:28:00] 2026-01-10 07:26:54,842 | INFO     | all job control threads have been joined
[2026-01-10 08:28:00] 2026-01-10 07:26:55,035 | INFO     | all payload control threads have been joined
[2026-01-10 08:28:00] 2026-01-10 07:26:55,431 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:55,539 | INFO     | [data] control thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:55,653 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:55,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:28:00] 2026-01-10 07:26:55,848 | INFO     | [job] control thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:55,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,033 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,040 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,041 | INFO     | [payload] control thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:28:00] 2026-01-10 07:26:56,434 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,703 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,849 | INFO     | [job] validate thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,901 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,918 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:56,962 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:57,396 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:26:59,755 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:28:00] 2026-01-10 07:27:23,069 | INFO     | PID=17720 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 08:28:00] 2026-01-10 07:27:23,069 | INFO     | .. there are 2 such processes running
[2026-01-10 08:28:00] 2026-01-10 07:27:23,069 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:28:00] 2026-01-10 07:27:23,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:28:00] 2026-01-10 07:27:23,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:28:00] 2026-01-10 07:27:48,508 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:28:00] 2026-01-10 07:27:49,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841016428352)>', '<ExcThread(monitor, started 139840444167936)>']
[2026-01-10 08:28:00] 2026-01-10 07:27:50,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:28:00] 2026-01-10 07:27:50,232 | INFO     | [monitor] control thread has ended
[2026-01-10 08:28:00] 2026-01-10 07:27:54,674 | INFO     | all workflow threads have been joined
[2026-01-10 08:28:00] 2026-01-10 07:27:54,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:28:00] 2026-01-10 07:27:54,675 | INFO     | traces error code: 0
[2026-01-10 08:28:00] 2026-01-10 07:27:54,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:28:00] 2026-01-10 07:27:54,889 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:28:00] 2026-01-10 07:27:54,969 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:28:00] 2026-01-10 07:27:55,104 [wrapper] pilotpid: 17720
[2026-01-10 08:28:00] 2026-01-10 07:27:55,226 [wrapper] Pilot exit status: 0
[2026-01-10 08:28:00] 2026-01-10 07:27:55,832 [wrapper] pandaids: 6963155900
[2026-01-10 08:28:00] 2026-01-10 07:27:56,965 [wrapper] cleanup supervisor_pilot 23485 17721
[2026-01-10 08:28:00] 2026-01-10 07:27:57,061 [wrapper] Test setup, not cleaning
[2026-01-10 08:28:00] 2026-01-10 07:27:57,162 [wrapper] apfmon messages muted
[2026-01-10 08:28:00] 2026-01-10 07:27:57,257 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:28:00] 2026-01-10 07:27:57,358 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:28:00]  *** Error codes and diagnostics ***
[2026-01-10 08:28:00]     "exeErrorCode": 0,
[2026-01-10 08:28:00]     "exeErrorDiag": "",
[2026-01-10 08:28:00]     "pilotErrorCode": 0,
[2026-01-10 08:28:00]     "pilotErrorDiag": "",
[2026-01-10 08:28:00]  *** Listing of results directory ***
[2026-01-10 08:28:00] total 444684
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 08:28:00] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc       100 Jan 10 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:28:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 02:18 run_atlas
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc       105 Jan 10 02:18 job.xml
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc      6391 Jan 10 02:18 init_data.xml
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc 223349144 Jan 10 02:18 EVNT.47898824._000884.pool.root.1
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc     15847 Jan 10 02:18 start_atlas.sh
[2026-01-10 08:28:00] drwxrwx--x. 2 boinc boinc        68 Jan 10 02:18 shared
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc    592390 Jan 10 02:18 input.tar.gz
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc         0 Jan 10 02:18 boinc_lockfile
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc      2519 Jan 10 02:19 pandaJob.out
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc    989382 Jan 10 02:23 agis_schedconf.cvmfs.json
[2026-01-10 08:28:00] drwx------. 5 boinc boinc      4096 Jan 10 02:23 pilot3
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc 221148706 Jan 10 08:23 HITS.47898826._031121.pool.root.1
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc       531 Jan 10 08:24 boinc_task_state.xml
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc      1012 Jan 10 08:24 memory_monitor_summary.json
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc   1516240 Jan 10 08:25 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc    568457 Jan 10 08:25 log.47898826._031121.job.log.tgz.1
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc        95 Jan 10 08:26 pilot_heartbeat.json
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc      7775 Jan 10 08:26 heartbeat.json
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc      8192 Jan 10 08:27 boinc_mmap_file
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc        28 Jan 10 08:27 wrapper_checkpoint.txt
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc      5071 Jan 10 08:27 pilotlog.txt
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc   2910388 Jan 10 08:27 log.47898826._031121.job.log.1
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc       357 Jan 10 08:27 output.list
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc       620 Jan 10 08:27 runtime_log
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc   3502080 Jan 10 08:27 result.tar.gz
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc      8833 Jan 10 08:28 runtime_log.err
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc       657 Jan 10 08:28 Md1MDmaZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmz6fKDmNPIZLm.diag
[2026-01-10 08:28:00] -rw-r--r--. 1 boinc boinc     20778 Jan 10 08:28 stderr.txt
[2026-01-10 08:28:00] HITS file was successfully produced:
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc 221148706 Jan 10 08:23 shared/HITS.pool.root.1
[2026-01-10 08:28:00]  *** Contents of shared directory: ***
[2026-01-10 08:28:00] total 438100
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc 223349144 Jan 10 02:18 ATLAS.root_0
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc     15847 Jan 10 02:18 start_atlas.sh
[2026-01-10 08:28:00] -rw-r--r--. 2 boinc boinc    592390 Jan 10 02:18 input.tar.gz
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc 221148706 Jan 10 08:23 HITS.pool.root.1
[2026-01-10 08:28:00] -rw-------. 1 boinc boinc   3502080 Jan 10 08:27 result.tar.gz
08:28:02 (13977): run_atlas exited; CPU time 80212.911180
08:28:02 (13977): called boinc_finish(0)

</stderr_txt>
]]>

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