Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:33 (1972831): wrapper (7.7.26015): starting
15:45:33 (1972831): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:45:33] Arguments: --nthreads 8
[2026-01-09 15:45:33] Threads: 8
[2026-01-09 15:45:33] Checking for CVMFS
[2026-01-09 15:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:45:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:45:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:45:35] 2.13.3.0 11502 93861 231504 154956 3 547 27655948 32935937 22386 16776704 0 649919315 99.576 735629372 37976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 15:45:35] CVMFS is ok
[2026-01-09 15:45:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:45:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:45:35] Further information can be found at the LHC@home message board.
[2026-01-09 15:45:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:45:35] Checking for apptainer binary...
[2026-01-09 15:45:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:45:35] Running /usr/bin/apptainer --version
[2026-01-09 15:45:35] apptainer version 1.4.5-2.el9
[2026-01-09 15:45:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:45:36] c7-2-15.aglt2.org
[2026-01-09 15:45:36] apptainer works
[2026-01-09 15:45:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:45:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:45:36] Starting ATLAS job with PandaID=6963187286
[2026-01-09 15:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:53:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:53:39] 2026-01-10 00:52:55,894 | INFO     | .. there are 22 such processes running
[2026-01-09 19:53:39] 2026-01-10 00:52:56,895 | INFO     | time since job start (14750s) is within the limit (349056.0s)
[2026-01-09 19:53:39] 2026-01-10 00:52:58,012 | INFO     | monitor loop #952: job 0:6963187286 is in state 'finished'
[2026-01-09 19:53:39] 2026-01-10 00:52:58,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:53:39] 2026-01-10 00:52:58,902 | INFO     | time since job start (14752s) is within the limit (349056.0s)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,517 | INFO     | monitor loop #953: job 0:6963187286 is in state 'finished'
[2026-01-09 19:53:39] 2026-01-10 00:53:00,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,761 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:53:39] 2026-01-10 00:53:00,788 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3293.1897395833334
[2026-01-09 19:53:39] 2026-01-10 00:53:00,882 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187286/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,883 | INFO     | extracted standard info from prmon json
[2026-01-09 19:53:39] 2026-01-10 00:53:00,883 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:53:39] 2026-01-10 00:53:00,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:53:39] 2026-01-10 00:53:00,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:53:39] 2026-01-10 00:53:00,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:53:39] 2026-01-10 00:53:00,905 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:53:39] 2026-01-10 00:53:00,906 | INFO     | sum of square deviations: 4286460919.662489
[2026-01-09 19:53:39] 2026-01-10 00:53:00,907 | INFO     | sum of deviations: 50948115248.32501
[2026-01-09 19:53:39] 2026-01-10 00:53:00,908 | INFO     | mean x: 1767999064.5375
[2026-01-09 19:53:39] 2026-01-10 00:53:00,908 | INFO     | mean y: 2480956.075
[2026-01-09 19:53:39] 2026-01-10 00:53:00,908 | INFO     | intersect: -21011642766.783962
[2026-01-09 19:53:39] 2026-01-10 00:53:00,908 | INFO     | chi2: 4.149311910493676
[2026-01-09 19:53:39] 2026-01-10 00:53:00,908 | INFO     | sum of square deviations: 4024095954.655324
[2026-01-09 19:53:39] 2026-01-10 00:53:00,910 | INFO     | sum of deviations: 64899208867.60424
[2026-01-09 19:53:39] 2026-01-10 00:53:00,910 | INFO     | mean x: 1767998912.038298
[2026-01-09 19:53:39] 2026-01-10 00:53:00,910 | INFO     | mean y: 2488914.7106382977
[2026-01-09 19:53:39] 2026-01-10 00:53:00,910 | INFO     | intersect: -28511177748.066174
[2026-01-09 19:53:39] 2026-01-10 00:53:00,910 | INFO     | chi2: 3.4702822172340584
[2026-01-09 19:53:39] 2026-01-10 00:53:00,911 | INFO     | current chi2=3.4702822172340584 (change=16.364874656502458 %)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,911 | INFO     | right removable region: 234
[2026-01-09 19:53:39] 2026-01-10 00:53:00,911 | INFO     | sum of square deviations: 4024090464.655324
[2026-01-09 19:53:39] 2026-01-10 00:53:00,912 | INFO     | sum of deviations: -18298386011.34893
[2026-01-09 19:53:39] 2026-01-10 00:53:00,912 | INFO     | mean x: 1767999217.038298
[2026-01-09 19:53:39] 2026-01-10 00:53:00,912 | INFO     | mean y: 2521088.9276595744
[2026-01-09 19:53:39] 2026-01-10 00:53:00,913 | INFO     | intersect: 8041985515.8041725
[2026-01-09 19:53:39] 2026-01-10 00:53:00,913 | INFO     | chi2: 0.8943277402220865
[2026-01-09 19:53:39] 2026-01-10 00:53:00,913 | INFO     | current chi2=0.8943277402220865 (change=78.44636027577687 %)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,913 | INFO     | sum of square deviations: 3772678993.2869515
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | sum of deviations: -28069559773.60869
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | mean x: 1767999369.5304348
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | mean y: 2526975.586956522
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | intersect: 13156830342.250935
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | chi2: 0.8025154575852321
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | current chi2=0.8025154575852321 (change=10.266066734556933 %)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | left removable region: 20
[2026-01-09 19:53:39] 2026-01-10 00:53:00,915 | INFO     | sum of square deviations: 3038835267.331771
[2026-01-09 19:53:39] 2026-01-10 00:53:00,917 | INFO     | sum of deviations: -4724282543.37383
[2026-01-09 19:53:39] 2026-01-10 00:53:00,917 | INFO     | mean x: 1767999491.5280373
[2026-01-09 19:53:39] 2026-01-10 00:53:00,917 | INFO     | mean y: 2530531.728971963
[2026-01-09 19:53:39] 2026-01-10 00:53:00,917 | INFO     | intersect: 2751126095.401496
[2026-01-09 19:53:39] 2026-01-10 00:53:00,917 | INFO     | chi2: 0.05426997285423326
[2026-01-09 19:53:39] 2026-01-10 00:53:00,920 | INFO     | current memory leak: -1.55 B/s (using 214 data points, chi2=0.05)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,920 | INFO     | could have reported an average CPU frequency of 3282 MHz (12 samples)
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | ..............................
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . Timing measurements:
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . get job = 0 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . initial setup = 8 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . payload setup = 47 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . stage-in = 0 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . payload execution = 14612 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . stage-out = 2 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | . log creation = 0 s
[2026-01-09 19:53:39] 2026-01-10 00:53:00,921 | INFO     | ..............................
[2026-01-09 19:53:39] 2026-01-10 00:53:00,920 | INFO     | time since job start (14754s) is within the limit (349056.0s)
[2026-01-09 19:53:39] 2026-01-10 00:53:01,056 | INFO     | 
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | job summary report
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | --------------------------------------------------
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | PanDA job id: 6963187286
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | task id: 47898826
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | errors: (none)
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | pilot state: finished 
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | transexitcode: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | exeerrorcode: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | exeerrordiag: 
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | exitcode: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | exitmsg: OK
[2026-01-09 19:53:39] 2026-01-10 00:53:01,057 | INFO     | cpuconsumptiontime: 45087 s
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | nevents: 400
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | neventsw: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | pid: 1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | pgrp: 1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | corecount: 8
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | event service: False
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 27: 2284373, 35: 2284529, 14663: 2315371, 14666: 2324369, 14670: 2324425, 14686: 2324619}
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | --------------------------------------------------
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | 
[2026-01-09 19:53:39] 2026-01-10 00:53:01,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:53:39] 2026-01-10 00:53:01,084 | INFO     | job 6963187286 has completed (purged errors)
[2026-01-09 19:53:39] 2026-01-10 00:53:01,085 | INFO     | overall cleanup function is called
[2026-01-09 19:53:39] 2026-01-10 00:53:02,101 | INFO     | --- collectZombieJob: --- 10, [1992606]
[2026-01-09 19:53:39] 2026-01-10 00:53:02,101 | INFO     | zombie collector waiting for pid 1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:02,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:53:39] 2026-01-10 00:53:02,101 | INFO     | collected zombie processes
[2026-01-09 19:53:39] 2026-01-10 00:53:02,101 | INFO     | will attempt to kill all subprocesses of pid=1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:02,681 | INFO     | process IDs to be killed: [1992606] (in reverse order)
[2026-01-09 19:53:39] 2026-01-10 00:53:02,830 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:53:39] 2026-01-10 00:53:02,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:53:39] 2026-01-10 00:53:02,850 | INFO     | did not find any defunct processes belonging to 1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:02,870 | INFO     | did not find any defunct processes belonging to 1992606
[2026-01-09 19:53:39] 2026-01-10 00:53:02,871 | INFO     | ready for new job
[2026-01-09 19:53:39] 2026-01-10 00:53:02,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:53:39] 2026-01-10 00:53:02,873 | INFO     | ***************************************
[2026-01-09 19:53:39] 2026-01-10 00:53:02,873 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:53:39] 2026-01-10 00:53:02,873 | INFO     | ***************************************
[2026-01-09 19:53:39] 2026-01-10 00:53:02,873 | INFO     | 
[2026-01-09 19:53:39] 2026-01-10 00:53:02,878 | INFO     | architecture information:
[2026-01-09 19:53:39] 2026-01-10 00:53:02,878 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:53:39] 2026-01-10 00:53:02,904 | INFO     | cat /etc/os-release:
[2026-01-09 19:53:39] NAME="CentOS Linux"
[2026-01-09 19:53:39] VERSION="7 (Core)"
[2026-01-09 19:53:39] ID="centos"
[2026-01-09 19:53:39] ID_LIKE="rhel fedora"
[2026-01-09 19:53:39] VERSION_ID="7"
[2026-01-09 19:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:53:39] ANSI_COLOR="0;31"
[2026-01-09 19:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:53:39] HOME_URL="https://www.centos.org/"
[2026-01-09 19:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:53:39] 
[2026-01-09 19:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:53:39] 
[2026-01-09 19:53:39] 2026-01-10 00:53:02,905 | INFO     | ***************************************
[2026-01-09 19:53:39] 2026-01-10 00:53:03,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:53:39] 2026-01-10 00:53:03,428 | INFO     | sufficient remaining disk space (73964453888 B)
[2026-01-09 19:53:39] 2026-01-10 00:53:03,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:53:39] 2026-01-10 00:53:03,429 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:53:39] 2026-01-10 00:53:03,429 | INFO     | update_server=False
[2026-01-09 19:53:39] 2026-01-10 00:53:03,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:53:39] 2026-01-10 00:53:03,440 | INFO     | all payload control threads have been joined
[2026-01-09 19:53:39] 2026-01-10 00:53:03,639 | INFO     | all data control threads have been joined
[2026-01-09 19:53:39] 2026-01-10 00:53:04,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:53:39] 2026-01-10 00:53:04,028 | INFO     | aborting loop
[2026-01-09 19:53:39] 2026-01-10 00:53:04,352 | INFO     | all job control threads have been joined
[2026-01-09 19:53:39] 2026-01-10 00:53:04,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:53:39] 2026-01-10 00:53:04,446 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:04,446 | INFO     | [payload] control thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:04,454 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:04,457 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:04,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:53:39] 2026-01-10 00:53:04,572 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:04,640 | INFO     | [data] control thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,033 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,359 | INFO     | [job] control thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,452 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,478 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,478 | INFO     | [job] validate thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:05,555 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:06,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:53:39] 2026-01-10 00:53:06,478 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:07,077 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:08,403 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:13,617 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:53:39] 2026-01-10 00:53:14,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:53:39] 2026-01-10 00:53:31,690 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:53:39] 2026-01-10 00:53:33,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096417859392)>', '<ExcThread(monitor, started 140095743039232)>']
[2026-01-09 19:53:39] 2026-01-10 00:53:34,786 | INFO     | PID=1977817 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | INFO     | .. there are 22 such processes running
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:53:39] 2026-01-10 00:53:34,791 | INFO     | [monitor] control thread has ended
[2026-01-09 19:53:39] 2026-01-10 00:53:38,450 | INFO     | all workflow threads have been joined
[2026-01-09 19:53:39] 2026-01-10 00:53:38,451 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:53:39] 2026-01-10 00:53:38,451 | INFO     | traces error code: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:38,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:53:39] 2026-01-10 00:53:38,605 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:53:39] 2026-01-10 00:53:38,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:53:39] 2026-01-10 00:53:38,619 [wrapper] pilotpid: 1977817
[2026-01-09 19:53:39] 2026-01-10 00:53:38,627 [wrapper] Pilot exit status: 0
[2026-01-09 19:53:39] 2026-01-10 00:53:38,687 [wrapper] pandaids: 6963187286
[2026-01-09 19:53:39] 2026-01-10 00:53:38,925 [wrapper] cleanup supervisor_pilot 2704259 1977818
[2026-01-09 19:53:39] 2026-01-10 00:53:38,949 [wrapper] Test setup, not cleaning
[2026-01-09 19:53:39] 2026-01-10 00:53:38,953 [wrapper] apfmon messages muted
[2026-01-09 19:53:39] 2026-01-10 00:53:38,956 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:53:39] 2026-01-10 00:53:38,958 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:53:39]  *** Error codes and diagnostics ***
[2026-01-09 19:53:39]     "exeErrorCode": 0,
[2026-01-09 19:53:39]     "exeErrorDiag": "",
[2026-01-09 19:53:39]     "pilotErrorCode": 0,
[2026-01-09 19:53:39]     "pilotErrorDiag": "",
[2026-01-09 19:53:39]  *** Listing of results directory ***
[2026-01-09 19:53:39] total 441768
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:53:39] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:28 queuedata.json
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:53:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:45 run_atlas
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:45 job.xml
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas 227130344 Jan  9 15:45 EVNT.47898824._001425.pool.root.1
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:45 start_atlas.sh
[2026-01-09 19:53:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:45 shared
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:45 input.tar.gz
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:45 boinc_lockfile
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 15:45 pandaJob.out
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas        57 Jan  9 15:45 setup.sh.local
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas    989381 Jan  9 15:46 agis_schedconf.cvmfs.json
[2026-01-09 19:53:39] drwx------. 5 boincer umatlas      4096 Jan  9 15:47 pilot3
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 19:46 init_data.xml
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas 216567411 Jan  9 19:52 HITS.47898826._037160.pool.root.1
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:52 boinc_task_state.xml
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas      1032 Jan  9 19:52 memory_monitor_summary.json
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas        95 Jan  9 19:52 pilot_heartbeat.json
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:52 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas    461226 Jan  9 19:52 log.47898826._037160.job.log.tgz.1
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas      7774 Jan  9 19:53 heartbeat.json
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:53 boinc_mmap_file
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:53 wrapper_checkpoint.txt
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas      4896 Jan  9 19:53 pilotlog.txt
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas   1919439 Jan  9 19:53 log.47898826._037160.job.log.1
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas       357 Jan  9 19:53 output.list
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:53 runtime_log
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas   2396160 Jan  9 19:53 result.tar.gz
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 19:53 runtime_log.err
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas       654 Jan  9 19:53 BwzKDmjEJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAImKDmTYJ9on.diag
[2026-01-09 19:53:39] -rw-r--r--. 1 boincer umatlas     21132 Jan  9 19:53 stderr.txt
[2026-01-09 19:53:39] HITS file was successfully produced:
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas 216567411 Jan  9 19:52 shared/HITS.pool.root.1
[2026-01-09 19:53:39]  *** Contents of shared directory: ***
[2026-01-09 19:53:39] total 436244
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas 227130344 Jan  9 15:45 ATLAS.root_0
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:45 start_atlas.sh
[2026-01-09 19:53:39] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:45 input.tar.gz
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas 216567411 Jan  9 19:52 HITS.pool.root.1
[2026-01-09 19:53:39] -rw-------. 1 boincer umatlas   2396160 Jan  9 19:53 result.tar.gz
19:53:40 (1972831): run_atlas exited; CPU time 45653.028353
19:53:40 (1972831): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN