Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:20 (4471): wrapper (7.7.26015): starting
00:46:20 (4471): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 00:46:20] Arguments: --nthreads 8
[2026-01-10 00:46:20] Threads: 8
[2026-01-10 00:46:20] Checking for CVMFS
[2026-01-10 00:46:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:46:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:46:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:46:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:46:24] 2.11.2.0 7658 36075 126932 154961 0 63 18314519 25165825 899 130560 0 18739056 99.819 12800671 3399 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 00:46:24] CVMFS is ok
[2026-01-10 00:46:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:46:24] Checking for apptainer binary...
[2026-01-10 00:46:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:46:24] Running /usr/bin/apptainer --version
[2026-01-10 00:46:24] apptainer version 1.3.2-1.el7
[2026-01-10 00:46:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:46:34] cg-vwn458.simple-grid.lan
[2026-01-10 00:46:34] apptainer works
[2026-01-10 00:46:34] Set ATHENA_PROC_NUMBER=8
[2026-01-10 00:46:34] Set ATHENA_CORE_NUMBER=8
[2026-01-10 00:46:34] Starting ATLAS job with PandaID=6963187156
[2026-01-10 00:46:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:34:20]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:34:20] 2026-01-10 05:33:26,993 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:34:20] 2026-01-10 05:33:26,994 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 06:34:20] 2026-01-10 05:33:26,996 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963187156/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:34:20] 2026-01-10 05:33:26,997 | INFO     | extracted standard info from prmon json
[2026-01-10 06:34:20] 2026-01-10 05:33:26,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:34:20] 2026-01-10 05:33:26,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:34:20] 2026-01-10 05:33:26,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:34:20] 2026-01-10 05:33:26,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:34:20] 2026-01-10 05:33:27,004 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:34:20] 2026-01-10 05:33:27,011 | INFO     | sum of square deviations: 10842205148.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,015 | INFO     | sum of deviations: 163875135917.99997
[2026-01-10 06:34:20] 2026-01-10 05:33:27,015 | INFO     | mean x: 1768013130.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,015 | INFO     | mean y: 2435556.5351681956
[2026-01-10 06:34:20] 2026-01-10 05:33:27,015 | INFO     | intersect: -26720301011.219597
[2026-01-10 06:34:20] 2026-01-10 05:33:27,016 | INFO     | chi2: 8.568672228594432
[2026-01-10 06:34:20] 2026-01-10 05:33:27,016 | INFO     | sum of square deviations: 10352419220.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,019 | INFO     | sum of deviations: 205822055812.50003
[2026-01-10 06:34:20] 2026-01-10 05:33:27,019 | INFO     | mean x: 1768012977.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,019 | INFO     | mean y: 2448488.8416149067
[2026-01-10 06:34:20] 2026-01-10 05:33:27,020 | INFO     | intersect: -35148375485.87122
[2026-01-10 06:34:20] 2026-01-10 05:33:27,020 | INFO     | chi2: 6.996092843357996
[2026-01-10 06:34:20] 2026-01-10 05:33:27,020 | INFO     | current chi2=6.996092843357996 (change=18.35266122082015 %)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,020 | INFO     | right removable region: 321
[2026-01-10 06:34:20] 2026-01-10 05:33:27,021 | INFO     | sum of square deviations: 10352419220.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,024 | INFO     | sum of deviations: 49427502455.50008
[2026-01-10 06:34:20] 2026-01-10 05:33:27,029 | INFO     | mean x: 1768013282.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,029 | INFO     | mean y: 2471174.4316770188
[2026-01-10 06:34:20] 2026-01-10 05:33:27,029 | INFO     | intersect: -8438887217.341877
[2026-01-10 06:34:20] 2026-01-10 05:33:27,030 | INFO     | chi2: 3.7589603378236403
[2026-01-10 06:34:20] 2026-01-10 05:33:27,030 | INFO     | current chi2=3.7589603378236403 (change=56.131355739344876 %)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,031 | INFO     | sum of square deviations: 9877610318.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,034 | INFO     | sum of deviations: -22822349009.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,034 | INFO     | mean x: 1768013435.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,034 | INFO     | mean y: 2494314.312302839
[2026-01-10 06:34:20] 2026-01-10 05:33:27,034 | INFO     | intersect: 4087512690.9373255
[2026-01-10 06:34:20] 2026-01-10 05:33:27,034 | INFO     | chi2: 1.755362482131007
[2026-01-10 06:34:20] 2026-01-10 05:33:27,035 | INFO     | current chi2=1.755362482131007 (change=53.30191530705734 %)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,035 | INFO     | sum of square deviations: 9417545878.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,038 | INFO     | sum of deviations: -30218162584.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,038 | INFO     | mean x: 1768013587.5
[2026-01-10 06:34:20] 2026-01-10 05:33:27,038 | INFO     | mean y: 2496752.2275641025
[2026-01-10 06:34:20] 2026-01-10 05:33:27,039 | INFO     | intersect: 5675537556.1473
[2026-01-10 06:34:20] 2026-01-10 05:33:27,039 | INFO     | chi2: 1.7269303221834789
[2026-01-10 06:34:20] 2026-01-10 05:33:27,039 | INFO     | current chi2=1.7269303221834789 (change=1.6197315504323375 %)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,039 | INFO     | left removable region: 30
[2026-01-10 06:34:20] 2026-01-10 05:33:27,040 | INFO     | sum of square deviations: 7641036290.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,043 | INFO     | sum of deviations: 4869507024.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,043 | INFO     | mean x: 1768013862.0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,043 | INFO     | mean y: 2514067.7285223366
[2026-01-10 06:34:20] 2026-01-10 05:33:27,043 | INFO     | intersect: -1124212150.1282923
[2026-01-10 06:34:20] 2026-01-10 05:33:27,043 | INFO     | chi2: 0.007642768711797664
[2026-01-10 06:34:20] 2026-01-10 05:33:27,044 | INFO     | current memory leak: 0.64 B/s (using 291 data points, chi2=0.01)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,044 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | ..............................
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . Timing measurements:
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . get job = 0 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . initial setup = 11 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . payload setup = 160 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . stage-in = 0 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . payload execution = 20074 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . stage-out = 3 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | . log creation = 1 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,045 | INFO     | ..............................
[2026-01-10 06:34:20] 2026-01-10 05:33:27,606 | INFO     | 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,606 | INFO     | job summary report
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | --------------------------------------------------
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | PanDA job id: 6963187156
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | task id: 47898826
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | errors: (none)
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | pilot state: finished 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | transexitcode: 0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | exeerrorcode: 0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | exeerrordiag: 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,607 | INFO     | exitcode: 0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | exitmsg: OK
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | cpuconsumptiontime: 75165 s
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | nevents: 400
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | neventsw: 0
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | pid: 14986
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | pgrp: 14986
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | corecount: 8
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | event service: False
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | sizes: {0: 2283143, 1: 2284000, 12: 2284000, 23: 2284028, 34: 2284056, 44: 2284084, 55: 2284240, 66: 2284268, 76: 2284296, 87: 2284352, 98: 2284380, 109: 2284688, 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,608 | INFO     | --------------------------------------------------
[2026-01-10 06:34:20] 2026-01-10 05:33:27,609 | INFO     | 
[2026-01-10 06:34:20] 2026-01-10 05:33:27,609 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-10 06:34:20] 2026-01-10 05:33:28,118 | INFO     | time since job start (20574s) is within the limit (349056.0s)
[2026-01-10 06:34:20] 2026-01-10 05:33:28,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | job 6963187156 has completed (purged errors)
[2026-01-10 06:34:20] 2026-01-10 05:33:28,137 | INFO     | overall cleanup function is called
[2026-01-10 06:34:20] 2026-01-10 05:33:29,145 | INFO     | --- collectZombieJob: --- 10, [14986]
[2026-01-10 06:34:20] 2026-01-10 05:33:29,145 | INFO     | zombie collector waiting for pid 14986
[2026-01-10 06:34:20] 2026-01-10 05:33:29,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:34:20] 2026-01-10 05:33:29,146 | INFO     | collected zombie processes
[2026-01-10 06:34:20] 2026-01-10 05:33:29,146 | INFO     | will attempt to kill all subprocesses of pid=14986
[2026-01-10 06:34:20] 2026-01-10 05:33:29,223 | INFO     | process IDs to be killed: [14986] (in reverse order)
[2026-01-10 06:34:20] 2026-01-10 05:33:30,219 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:34:20] 2026-01-10 05:33:30,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:34:20] 2026-01-10 05:33:30,221 | INFO     | did not find any defunct processes belonging to 14986
[2026-01-10 06:34:20] 2026-01-10 05:33:30,222 | INFO     | did not find any defunct processes belonging to 14986
[2026-01-10 06:34:20] 2026-01-10 05:33:30,223 | INFO     | ready for new job
[2026-01-10 06:34:20] 2026-01-10 05:33:30,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:34:20] 2026-01-10 05:33:30,225 | INFO     | ***************************************
[2026-01-10 06:34:20] 2026-01-10 05:33:30,225 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:34:20] 2026-01-10 05:33:30,225 | INFO     | ***************************************
[2026-01-10 06:34:20] 2026-01-10 05:33:30,225 | INFO     | 
[2026-01-10 06:34:20] 2026-01-10 05:33:30,226 | INFO     | pilot is running in a VM
[2026-01-10 06:34:20] 2026-01-10 05:33:30,226 | INFO     | architecture information:
[2026-01-10 06:34:20] 2026-01-10 05:33:30,240 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:34:20] 2026-01-10 05:33:30,503 | INFO     | cat /etc/os-release:
[2026-01-10 06:34:20] NAME="CentOS Linux"
[2026-01-10 06:34:20] VERSION="7 (Core)"
[2026-01-10 06:34:20] ID="centos"
[2026-01-10 06:34:20] ID_LIKE="rhel fedora"
[2026-01-10 06:34:20] VERSION_ID="7"
[2026-01-10 06:34:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:34:20] ANSI_COLOR="0;31"
[2026-01-10 06:34:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:34:20] HOME_URL="https://www.centos.org/"
[2026-01-10 06:34:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:34:20] 
[2026-01-10 06:34:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:34:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:34:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:34:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:34:20] 
[2026-01-10 06:34:20] 2026-01-10 05:33:30,503 | INFO     | ***************************************
[2026-01-10 06:34:20] 2026-01-10 05:33:31,006 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-10 06:34:20] 2026-01-10 05:33:31,295 | INFO     | sufficient remaining disk space (497177067520 B)
[2026-01-10 06:34:20] 2026-01-10 05:33:31,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:34:20] 2026-01-10 05:33:31,295 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:34:20] 2026-01-10 05:33:31,295 | INFO     | update_server=False
[2026-01-10 06:34:20] 2026-01-10 05:33:31,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:34:20] 2026-01-10 05:33:31,317 | INFO     | all data control threads have been joined
[2026-01-10 06:34:20] 2026-01-10 05:33:31,511 | INFO     | all job control threads have been joined
[2026-01-10 06:34:20] 2026-01-10 05:33:31,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:34:20] 2026-01-10 05:33:31,747 | INFO     | aborting loop
[2026-01-10 06:34:20] 2026-01-10 05:33:32,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:34:20] 2026-01-10 05:33:32,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:34:20] 2026-01-10 05:33:32,301 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,323 | INFO     | [data] control thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,414 | INFO     | all payload control threads have been joined
[2026-01-10 06:34:20] 2026-01-10 05:33:32,517 | INFO     | [job] control thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,726 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,753 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,807 | INFO     | [job] validate thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:32,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,201 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,215 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,232 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,332 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,420 | INFO     | [payload] control thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,497 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:33,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:34:20] 2026-01-10 05:33:34,150 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:33:37,591 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:34:20] 2026-01-10 05:34:01,231 | INFO     | PID=8414 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 06:34:20] 2026-01-10 05:34:01,231 | INFO     | .. there are 2 such processes running
[2026-01-10 06:34:20] 2026-01-10 05:34:01,232 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:34:20] 2026-01-10 05:34:01,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:34:20] 2026-01-10 05:34:01,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:34:20] 2026-01-10 05:34:09,370 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:34:20] 2026-01-10 05:34:10,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895320897344)>', '<ExcThread(monitor, started 139894626166528)>']
[2026-01-10 06:34:20] 2026-01-10 05:34:11,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:34:20] 2026-01-10 05:34:11,291 | INFO     | [monitor] control thread has ended
[2026-01-10 06:34:20] 2026-01-10 05:34:15,590 | INFO     | all workflow threads have been joined
[2026-01-10 06:34:20] 2026-01-10 05:34:15,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:34:20] 2026-01-10 05:34:15,591 | INFO     | traces error code: 0
[2026-01-10 06:34:20] 2026-01-10 05:34:15,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:34:20] 2026-01-10 05:34:15,810 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:34:20] 2026-01-10 05:34:15,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:34:20] 2026-01-10 05:34:15,972 [wrapper] pilotpid: 8414
[2026-01-10 06:34:20] 2026-01-10 05:34:16,039 [wrapper] Pilot exit status: 0
[2026-01-10 06:34:20] 2026-01-10 05:34:16,532 [wrapper] pandaids: 6963187156
[2026-01-10 06:34:20] 2026-01-10 05:34:17,481 [wrapper] cleanup supervisor_pilot 12492 8415
[2026-01-10 06:34:20] 2026-01-10 05:34:17,574 [wrapper] Test setup, not cleaning
[2026-01-10 06:34:20] 2026-01-10 05:34:17,619 [wrapper] apfmon messages muted
[2026-01-10 06:34:20] 2026-01-10 05:34:17,677 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:34:20] 2026-01-10 05:34:17,783 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:34:20]  *** Error codes and diagnostics ***
[2026-01-10 06:34:20]     "exeErrorCode": 0,
[2026-01-10 06:34:20]     "exeErrorDiag": "",
[2026-01-10 06:34:20]     "pilotErrorCode": 0,
[2026-01-10 06:34:20]     "pilotErrorDiag": "",
[2026-01-10 06:34:20]  *** Listing of results directory ***
[2026-01-10 06:34:20] total 435656
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 06:34:20] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:28 queuedata.json
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc       100 Jan 10 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:34:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 00:46 run_atlas
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc       105 Jan 10 00:46 job.xml
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc 222232026 Jan 10 00:46 EVNT.47898824._001420.pool.root.1
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:46 start_atlas.sh
[2026-01-10 06:34:20] drwxrwx--x. 2 boinc boinc        68 Jan 10 00:46 shared
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc    592402 Jan 10 00:46 input.tar.gz
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc      6389 Jan 10 00:46 init_data.xml
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc         0 Jan 10 00:46 boinc_lockfile
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc      2520 Jan 10 00:46 pandaJob.out
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc    989374 Jan 10 00:50 agis_schedconf.cvmfs.json
[2026-01-10 06:34:20] drwx------. 5 boinc boinc      4096 Jan 10 00:50 pilot3
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc 213443895 Jan 10 06:29 HITS.47898826._037030.pool.root.1
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc       531 Jan 10 06:30 boinc_task_state.xml
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc      1012 Jan 10 06:31 memory_monitor_summary.json
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc   1516240 Jan 10 06:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc    530472 Jan 10 06:31 log.47898826._037030.job.log.tgz.1
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc        95 Jan 10 06:33 pilot_heartbeat.json
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc      7778 Jan 10 06:33 heartbeat.json
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc      8192 Jan 10 06:34 boinc_mmap_file
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc        28 Jan 10 06:34 wrapper_checkpoint.txt
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc      4884 Jan 10 06:34 pilotlog.txt
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc   2740103 Jan 10 06:34 log.47898826._037030.job.log.1
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc       357 Jan 10 06:34 output.list
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc       620 Jan 10 06:34 runtime_log
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc   3287040 Jan 10 06:34 result.tar.gz
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc      8833 Jan 10 06:34 runtime_log.err
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc       657 Jan 10 06:34 6LLODmiEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmf4gKDmVvUsnm.diag
[2026-01-10 06:34:20] -rw-r--r--. 1 boinc boinc     20710 Jan 10 06:34 stderr.txt
[2026-01-10 06:34:20] HITS file was successfully produced:
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc 213443895 Jan 10 06:29 shared/HITS.pool.root.1
[2026-01-10 06:34:20]  *** Contents of shared directory: ***
[2026-01-10 06:34:20] total 429276
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc 222232026 Jan 10 00:46 ATLAS.root_0
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc     15847 Jan 10 00:46 start_atlas.sh
[2026-01-10 06:34:20] -rw-r--r--. 2 boinc boinc    592402 Jan 10 00:46 input.tar.gz
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc 213443895 Jan 10 06:29 HITS.pool.root.1
[2026-01-10 06:34:20] -rw-------. 1 boinc boinc   3287040 Jan 10 06:34 result.tar.gz
06:34:22 (4471): run_atlas exited; CPU time 75355.255557
06:34:22 (4471): called boinc_finish(0)

</stderr_txt>
]]>

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