Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:05:03 (3291600): wrapper (7.7.26015): starting
19:05:03 (3291600): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 19:05:03] Arguments: --nthreads 3
[2026-01-10 19:05:03] Threads: 3
[2026-01-10 19:05:03] Checking for CVMFS
[2026-01-10 19:05:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:05:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:05:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:05:04] 2.9.2.0 1971155 3734 72528 154987 3 57 16745488 36864001 0 130560 0 2325442 99.987 140215 2544 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 19:05:04] CVMFS is ok
[2026-01-10 19:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 19:05:04] Further information can be found at the LHC@home message board.
[2026-01-10 19:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:05:04] Checking for apptainer binary...
[2026-01-10 19:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 19:05:04] Running /usr/bin/apptainer --version
[2026-01-10 19:05:04] apptainer version 1.4.1-1.1
[2026-01-10 19:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:05:04] thA363a
[2026-01-10 19:05:04] apptainer works
[2026-01-10 19:05:04] Set ATHENA_PROC_NUMBER=3
[2026-01-10 19:05:04] Set ATHENA_CORE_NUMBER=3
[2026-01-10 19:05:04] Starting ATLAS job with PandaID=6963193716
[2026-01-10 19:05:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:59:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:59:25] 2026-01-10 19:58:30,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 20:59:25] 2026-01-10 19:58:30,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | sum of deviations: 6427645151.999999
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | mean x: 1768071684.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | mean y: 2341369.810810811
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | intersect: -26797958362.53627
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | chi2: 1.5360867090197787
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | sum of square deviations: 369281342.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | sum of deviations: 6121272042.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | mean x: 1768071531.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | mean y: 2340515.9433962265
[2026-01-10 20:59:25] 2026-01-10 19:58:30,740 | INFO     | intersect: -29305522049.647964
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | chi2: 1.5388961962125938
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | current chi2=1.5388961962125938 (change=-0.1828989975837924 %)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | right removable region: 105
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | sum of square deviations: 369281342.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | sum of deviations: -6066186449.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | mean x: 1768071836.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | mean y: 2375083.3113207547
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | intersect: 29046499933.238934
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | chi2: 0.11839669787221486
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | current chi2=0.11839669787221486 (change=92.29231675679512 %)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | sum of square deviations: 319447850.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | sum of deviations: -461912374.0000003
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | mean x: 1768071989.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | mean y: 2357902.673267327
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | intersect: 2558938984.192183
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | chi2: 0.02853593500711371
[2026-01-10 20:59:25] 2026-01-10 19:58:30,741 | INFO     | current chi2=0.02853593500711371 (change=75.89803134719818 %)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of square deviations: 274312120.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of deviations: 392573308.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean x: 1768072141.5
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean y: 2355180.25
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | intersect: -2527966591.064002
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | chi2: 0.0011781259361701491
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | current chi2=0.0011781259361701491 (change=95.87143040563957 %)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of square deviations: 233641590.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of deviations: 147026165.00000003
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean x: 1768072294.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean y: 2356101.6923076925
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | intersect: -1110257833.3077602
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | chi2: 0.0009932585150498818
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | current chi2=0.0009932585150498818 (change=15.691651923158082 %)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | left removable region: 40
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of square deviations: 85136480.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | sum of deviations: -209705922.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean x: 1768072721.0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,742 | INFO     | mean y: 2357208.3076923075
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | intersect: 4357427092.807895
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | chi2: 0.00034760045378381076
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | current memory leak: -2.46 B/s (using 65 data points, chi2=0.00)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | could have reported an average CPU frequency of 4052 MHz (7 samples)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | ..............................
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . Timing measurements:
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . get job = 0 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . initial setup = 1 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . payload setup = 2 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . stage-in = 0 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . payload execution = 6772 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . stage-out = 0 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | . log creation = 0 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,743 | INFO     | ..............................
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | 
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | job summary report
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | --------------------------------------------------
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | PanDA job id: 6963193716
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | task id: 47898826
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | errors: (none)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | pilot state: finished 
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | transexitcode: 0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | exeerrorcode: 0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | exeerrordiag: 
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | exitcode: 0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | exitmsg: OK
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | cpuconsumptiontime: 19655 s
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | nevents: 400
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | neventsw: 0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | pid: 3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | pgrp: 3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | corecount: 3
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | event service: False
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | sizes: {0: 2283974, 2: 2284236, 10: 2284264, 6778: 2311560, 6780: 2320564, 6783: 2320620, 6787: 2320942}
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | --------------------------------------------------
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | 
[2026-01-10 20:59:25] 2026-01-10 19:58:30,773 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,787 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:59:25] 2026-01-10 19:58:30,787 | INFO     | job 6963193716 has completed (purged errors)
[2026-01-10 20:59:25] 2026-01-10 19:58:30,787 | INFO     | overall cleanup function is called
[2026-01-10 20:59:25] 2026-01-10 19:58:31,793 | INFO     | --- collectZombieJob: --- 10, [3301788]
[2026-01-10 20:59:25] 2026-01-10 19:58:31,793 | INFO     | zombie collector waiting for pid 3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:31,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:59:25] 2026-01-10 19:58:31,793 | INFO     | collected zombie processes
[2026-01-10 20:59:25] 2026-01-10 19:58:31,793 | INFO     | will attempt to kill all subprocesses of pid=3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:31,860 | INFO     | process IDs to be killed: [3301788] (in reverse order)
[2026-01-10 20:59:25] 2026-01-10 19:58:31,891 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:59:25] 2026-01-10 19:58:31,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:59:25] 2026-01-10 19:58:31,893 | INFO     | did not find any defunct processes belonging to 3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:31,895 | INFO     | did not find any defunct processes belonging to 3301788
[2026-01-10 20:59:25] 2026-01-10 19:58:31,895 | INFO     | ready for new job
[2026-01-10 20:59:25] 2026-01-10 19:58:31,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:59:25] 2026-01-10 19:58:31,896 | INFO     | ***************************************
[2026-01-10 20:59:25] 2026-01-10 19:58:31,896 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:59:25] 2026-01-10 19:58:31,896 | INFO     | ***************************************
[2026-01-10 20:59:25] 2026-01-10 19:58:31,896 | INFO     | 
[2026-01-10 20:59:25] 2026-01-10 19:58:31,897 | INFO     | architecture information:
[2026-01-10 20:59:25] 2026-01-10 19:58:31,897 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:59:25] 2026-01-10 19:58:31,906 | INFO     | cat /etc/os-release:
[2026-01-10 20:59:25] NAME="CentOS Linux"
[2026-01-10 20:59:25] VERSION="7 (Core)"
[2026-01-10 20:59:25] ID="centos"
[2026-01-10 20:59:25] ID_LIKE="rhel fedora"
[2026-01-10 20:59:25] VERSION_ID="7"
[2026-01-10 20:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:59:25] ANSI_COLOR="0;31"
[2026-01-10 20:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:59:25] HOME_URL="https://www.centos.org/"
[2026-01-10 20:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:59:25] 
[2026-01-10 20:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:59:25] 
[2026-01-10 20:59:25] 2026-01-10 19:58:31,906 | INFO     | ***************************************
[2026-01-10 20:59:25] 2026-01-10 19:58:32,409 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 20:59:25] 2026-01-10 19:58:32,419 | INFO     | sufficient remaining disk space (242949816320 B)
[2026-01-10 20:59:25] 2026-01-10 19:58:32,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:59:25] 2026-01-10 19:58:32,420 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:59:25] 2026-01-10 19:58:32,420 | INFO     | update_server=False
[2026-01-10 20:59:25] 2026-01-10 19:58:32,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:59:25] 2026-01-10 19:58:32,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:59:25] 2026-01-10 19:58:32,472 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:59:25] 2026-01-10 19:58:32,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:59:25] 2026-01-10 19:58:32,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:59:25] 2026-01-10 19:58:32,472 | INFO     | will abort loop
[2026-01-10 20:59:25] 2026-01-10 19:58:32,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:59:25] 2026-01-10 19:58:32,578 | INFO     | all payload control threads have been joined
[2026-01-10 20:59:25] 2026-01-10 19:58:33,401 | INFO     | all job control threads have been joined
[2026-01-10 20:59:25] 2026-01-10 19:58:33,424 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:33,425 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:33,465 | INFO     | all data control threads have been joined
[2026-01-10 20:59:25] 2026-01-10 19:58:33,478 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:33,505 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:33,584 | INFO     | [payload] control thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:33,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:59:25] 2026-01-10 19:58:33,819 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,043 | INFO     | [job] validate thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,045 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,138 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,341 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,407 | INFO     | [job] control thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,470 | INFO     | [data] control thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:34,870 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:35,614 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:58:36,578 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:59:25] 2026-01-10 19:59:02,177 | INFO     | PID=3295322 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:59:25] 2026-01-10 19:59:02,178 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:59:25] 2026-01-10 19:59:02,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:59:25] 2026-01-10 19:59:02,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:59:25] 2026-01-10 19:59:19,630 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:59:25] 2026-01-10 19:59:19,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868827600704)>', '<ExcThread(monitor, started 139868336277248)>']
[2026-01-10 20:59:25] 2026-01-10 19:59:20,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:59:25] 2026-01-10 19:59:20,256 | INFO     | [monitor] control thread has ended
[2026-01-10 20:59:25] 2026-01-10 19:59:24,896 | INFO     | all workflow threads have been joined
[2026-01-10 20:59:25] 2026-01-10 19:59:24,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:59:25] 2026-01-10 19:59:24,896 | INFO     | traces error code: 0
[2026-01-10 20:59:25] 2026-01-10 19:59:24,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:59:25] 2026-01-10 19:59:24,946 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:59:25] 2026-01-10 19:59:24,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:59:25] 2026-01-10 19:59:24,951 [wrapper] pilotpid: 3295322
[2026-01-10 20:59:25] 2026-01-10 19:59:24,953 [wrapper] Pilot exit status: 0
[2026-01-10 20:59:25] 2026-01-10 19:59:24,960 [wrapper] pandaids: 6963193716
[2026-01-10 20:59:25] 2026-01-10 19:59:24,982 [wrapper] cleanup supervisor_pilot 3317194 3295323
[2026-01-10 20:59:25] 2026-01-10 19:59:24,985 [wrapper] Test setup, not cleaning
[2026-01-10 20:59:25] 2026-01-10 19:59:24,987 [wrapper] apfmon messages muted
[2026-01-10 20:59:25] 2026-01-10 19:59:24,989 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:59:25] 2026-01-10 19:59:24,991 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:59:25]  *** Error codes and diagnostics ***
[2026-01-10 20:59:25]     "exeErrorCode": 0,
[2026-01-10 20:59:25]     "exeErrorDiag": "",
[2026-01-10 20:59:25]     "pilotErrorCode": 0,
[2026-01-10 20:59:25]     "pilotErrorDiag": "",
[2026-01-10 20:59:25]  *** Listing of results directory ***
[2026-01-10 20:59:25] total 434508
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 20:59:25] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc       100 Jan 10 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:59:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 19:05 run_atlas
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc       105 Jan 10 19:05 job.xml
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc 223573478 Jan 10 19:05 EVNT.47898824._001506.pool.root.1
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc    592400 Jan 10 19:05 input.tar.gz
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 19:05 start_atlas.sh
[2026-01-10 20:59:25] drwxrwx--x 2 boinc boinc      4096 Jan 10 19:05 shared
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc         0 Jan 10 19:05 boinc_setup_complete
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc      6438 Jan 10 19:05 init_data.xml
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc         0 Jan 10 19:05 boinc_lockfile
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc      2520 Jan 10 19:05 pandaJob.out
[2026-01-10 20:59:25] -rw------- 1 boinc boinc    989548 Jan 10 19:05 agis_schedconf.cvmfs.json
[2026-01-10 20:59:25] -rw------- 1 boinc boinc   1516240 Jan 10 19:05 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:59:25] drwx------ 5 boinc boinc      4096 Jan 10 19:05 pilot3
[2026-01-10 20:59:25] -rw------- 1 boinc boinc 214919687 Jan 10 20:58 HITS.47898826._039189.pool.root.1
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc       530 Jan 10 20:58 boinc_task_state.xml
[2026-01-10 20:59:25] -rw------- 1 boinc boinc      1017 Jan 10 20:58 memory_monitor_summary.json
[2026-01-10 20:59:25] -rw------- 1 boinc boinc    283509 Jan 10 20:58 log.47898826._039189.job.log.tgz.1
[2026-01-10 20:59:25] -rw------- 1 boinc boinc      7752 Jan 10 20:58 heartbeat.json
[2026-01-10 20:59:25] -rw------- 1 boinc boinc        95 Jan 10 20:59 pilot_heartbeat.json
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc        27 Jan 10 20:59 wrapper_checkpoint.txt
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc      8192 Jan 10 20:59 boinc_mmap_file
[2026-01-10 20:59:25] -rw------- 1 boinc boinc      4938 Jan 10 20:59 pilotlog.txt
[2026-01-10 20:59:25] -rw------- 1 boinc boinc    979838 Jan 10 20:59 log.47898826._039189.job.log.1
[2026-01-10 20:59:25] -rw------- 1 boinc boinc       357 Jan 10 20:59 output.list
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc       620 Jan 10 20:59 runtime_log
[2026-01-10 20:59:25] -rw------- 1 boinc boinc   1280000 Jan 10 20:59 result.tar.gz
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc      8902 Jan 10 20:59 runtime_log.err
[2026-01-10 20:59:25] -rw------- 1 boinc boinc       660 Jan 10 20:59 iZcKDm5CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr1gKDmBwNWOo.diag
[2026-01-10 20:59:25] -rw-r--r-- 1 boinc boinc     20902 Jan 10 20:59 stderr.txt
[2026-01-10 20:59:25] HITS file was successfully produced:
[2026-01-10 20:59:25] -rw------- 1 boinc boinc 214919687 Jan 10 20:58 shared/HITS.pool.root.1
[2026-01-10 20:59:25]  *** Contents of shared directory: ***
[2026-01-10 20:59:25] total 430076
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc 223573478 Jan 10 19:05 ATLAS.root_0
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc    592400 Jan 10 19:05 input.tar.gz
[2026-01-10 20:59:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 19:05 start_atlas.sh
[2026-01-10 20:59:25] -rw------- 1 boinc boinc 214919687 Jan 10 20:58 HITS.pool.root.1
[2026-01-10 20:59:25] -rw------- 1 boinc boinc   1280000 Jan 10 20:59 result.tar.gz
20:59:26 (3291600): run_atlas exited; CPU time 19700.654681
20:59:26 (3291600): called boinc_finish(0)

</stderr_txt>
]]>

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