Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:53:32 (1616): wrapper (7.7.26015): starting
14:53:32 (1616): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:53:32] Arguments: --nthreads 8
[2026-01-09 14:53:32] Threads: 8
[2026-01-09 14:53:32] Checking for CVMFS
[2026-01-09 14:53:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:53:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:53:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:53:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:53:33] 2.11.2.0 2776 106884 85332 154955 1 59 17936508 20275201 1 130560 0 22325833 99.796 6646216 31584 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:53:33] CVMFS is ok
[2026-01-09 14:53:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:53:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:53:33] Further information can be found at the LHC@home message board.
[2026-01-09 14:53:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:53:33] Checking for apptainer binary...
[2026-01-09 14:53:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:53:33] Running /usr/bin/apptainer --version
[2026-01-09 14:53:33] apptainer version 1.3.2-1.el7
[2026-01-09 14:53:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:53:34] c-115-7.aglt2.org
[2026-01-09 14:53:34] apptainer works
[2026-01-09 14:53:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:53:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:53:34] Starting ATLAS job with PandaID=6963188207
[2026-01-09 14:53:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:26:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:26:12] 2026-01-09 22:25:34,070 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188207/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:26:12] 2026-01-09 22:25:34,070 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-09 17:26:12] 2026-01-09 22:25:34,071 | WARNING  | maxPSS not found in memory monitor output
[2026-01-09 17:26:12] 2026-01-09 22:25:34,166 | INFO     | number of running child processes to parent process 12071: 1
[2026-01-09 17:26:12] 2026-01-09 22:25:34,166 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:26:12] 2026-01-09 22:25:34,380 | INFO     | time since job start (9103s) is within the limit (349056.0s)
[2026-01-09 17:26:12] 2026-01-09 22:25:36,385 | INFO     | time since job start (9105s) is within the limit (349056.0s)
[2026-01-09 17:26:12] 2026-01-09 22:25:36,669 | INFO     | monitor loop #671: job 0:6963188207 is in state 'finished'
[2026-01-09 17:26:12] 2026-01-09 22:25:36,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,393 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 17:26:12] 2026-01-09 22:25:37,398 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2026-01-09 17:26:12] 2026-01-09 22:25:37,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188207/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,401 | INFO     | extracted standard info from prmon json
[2026-01-09 17:26:12] 2026-01-09 22:25:37,401 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:26:12] 2026-01-09 22:25:37,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:26:12] 2026-01-09 22:25:37,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:26:12] 2026-01-09 22:25:37,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:26:12] 2026-01-09 22:25:37,405 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:26:12] 2026-01-09 22:25:37,405 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,406 | INFO     | sum of deviations: 9493672474.999996
[2026-01-09 17:26:12] 2026-01-09 22:25:37,406 | INFO     | mean x: 1767992976.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,407 | INFO     | mean y: 2511707.651006711
[2026-01-09 17:26:12] 2026-01-09 22:25:37,407 | INFO     | intersect: -16361776257.127296
[2026-01-09 17:26:12] 2026-01-09 22:25:37,407 | INFO     | chi2: 1.396997802844212
[2026-01-09 17:26:12] 2026-01-09 22:25:37,407 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,408 | INFO     | sum of deviations: 9124359747.999998
[2026-01-09 17:26:12] 2026-01-09 22:25:37,408 | INFO     | mean x: 1767992823.5
[2026-01-09 17:26:12] 2026-01-09 22:25:37,409 | INFO     | mean y: 2511143.347222222
[2026-01-09 17:26:12] 2026-01-09 22:25:37,409 | INFO     | intersect: -17421090852.533173
[2026-01-09 17:26:12] 2026-01-09 22:25:37,409 | INFO     | chi2: 1.3983279590306845
[2026-01-09 17:26:12] 2026-01-09 22:25:37,409 | INFO     | current chi2=1.3983279590306845 (change=-0.09521533847543276 %)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,409 | INFO     | right removable region: 143
[2026-01-09 17:26:12] 2026-01-09 22:25:37,410 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,410 | INFO     | sum of deviations: -10343866410.500002
[2026-01-09 17:26:12] 2026-01-09 22:25:37,411 | INFO     | mean x: 1767993128.5
[2026-01-09 17:26:12] 2026-01-09 22:25:37,411 | INFO     | mean y: 2541485.076388889
[2026-01-09 17:26:12] 2026-01-09 22:25:37,411 | INFO     | intersect: 19754880005.705868
[2026-01-09 17:26:12] 2026-01-09 22:25:37,412 | INFO     | chi2: 0.09918095679387241
[2026-01-09 17:26:12] 2026-01-09 22:25:37,412 | INFO     | current chi2=0.09918095679387241 (change=92.90042141856306 %)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,412 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,413 | INFO     | sum of deviations: -9144667624.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,413 | INFO     | mean x: 1767993281.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,413 | INFO     | mean y: 2539434.690647482
[2026-01-09 17:26:12] 2026-01-09 22:25:37,413 | INFO     | intersect: 19418021985.98091
[2026-01-09 17:26:12] 2026-01-09 22:25:37,414 | INFO     | chi2: 0.0853525827793906
[2026-01-09 17:26:12] 2026-01-09 22:25:37,414 | INFO     | current chi2=0.0853525827793906 (change=13.942569684240183 %)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,414 | INFO     | left removable region: 20
[2026-01-09 17:26:12] 2026-01-09 22:25:37,414 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,415 | INFO     | sum of deviations: 542391686.9999998
[2026-01-09 17:26:12] 2026-01-09 22:25:37,415 | INFO     | mean x: 1767993403.0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,415 | INFO     | mean y: 2521077.073170732
[2026-01-09 17:26:12] 2026-01-09 22:25:37,416 | INFO     | intersect: -1659469715.9985795
[2026-01-09 17:26:12] 2026-01-09 22:25:37,416 | INFO     | chi2: 0.012536966800886932
[2026-01-09 17:26:12] 2026-01-09 22:25:37,416 | INFO     | current memory leak: 0.94 B/s (using 123 data points, chi2=0.01)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,416 | INFO     | could have reported an average CPU frequency of 2143 MHz (8 samples)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | ..............................
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . Timing measurements:
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . get job = 0 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . initial setup = 2 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . payload setup = 7 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . stage-in = 0 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,417 | INFO     | . payload execution = 9070 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,418 | INFO     | . stage-out = 0 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,418 | INFO     | . log creation = 0 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,418 | INFO     | ..............................
[2026-01-09 17:26:12] 2026-01-09 22:25:37,523 | INFO     | 
[2026-01-09 17:26:12] 2026-01-09 22:25:37,523 | INFO     | job summary report
[2026-01-09 17:26:12] 2026-01-09 22:25:37,523 | INFO     | --------------------------------------------------
[2026-01-09 17:26:12] 2026-01-09 22:25:37,523 | INFO     | PanDA job id: 6963188207
[2026-01-09 17:26:12] 2026-01-09 22:25:37,523 | INFO     | task id: 47898826
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | errors: (none)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | pilot state: finished 
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | transexitcode: 0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | exeerrorcode: 0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,524 | INFO     | exeerrordiag: 
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | exitcode: 0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | exitmsg: OK
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | cpuconsumptiontime: 67717 s
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | nevents: 400
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | neventsw: 0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,525 | INFO     | pid: 12071
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | pgrp: 12071
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | corecount: 8
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | event service: False
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 9082: 2312517, 9083: 2321699, 9089: 2321837}
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | --------------------------------------------------
[2026-01-09 17:26:12] 2026-01-09 22:25:37,526 | INFO     | 
[2026-01-09 17:26:12] 2026-01-09 22:25:37,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 17:26:12] 2026-01-09 22:25:37,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,554 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,554 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:26:12] 2026-01-09 22:25:37,558 | INFO     | job 6963188207 has completed (purged errors)
[2026-01-09 17:26:12] 2026-01-09 22:25:37,558 | INFO     | overall cleanup function is called
[2026-01-09 17:26:12] 2026-01-09 22:25:38,566 | INFO     | --- collectZombieJob: --- 10, [12071]
[2026-01-09 17:26:12] 2026-01-09 22:25:38,566 | INFO     | zombie collector waiting for pid 12071
[2026-01-09 17:26:12] 2026-01-09 22:25:38,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:26:12] 2026-01-09 22:25:38,567 | INFO     | collected zombie processes
[2026-01-09 17:26:12] 2026-01-09 22:25:38,567 | INFO     | will attempt to kill all subprocesses of pid=12071
[2026-01-09 17:26:12] 2026-01-09 22:25:38,652 | INFO     | process IDs to be killed: [12071] (in reverse order)
[2026-01-09 17:26:12] 2026-01-09 22:25:38,704 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:26:12] 2026-01-09 22:25:38,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:26:12] 2026-01-09 22:25:38,709 | INFO     | did not find any defunct processes belonging to 12071
[2026-01-09 17:26:12] 2026-01-09 22:25:38,711 | INFO     | did not find any defunct processes belonging to 12071
[2026-01-09 17:26:12] 2026-01-09 22:25:38,712 | INFO     | ready for new job
[2026-01-09 17:26:12] 2026-01-09 22:25:38,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:26:12] 2026-01-09 22:25:38,713 | INFO     | ***************************************
[2026-01-09 17:26:12] 2026-01-09 22:25:38,713 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:26:12] 2026-01-09 22:25:38,714 | INFO     | ***************************************
[2026-01-09 17:26:12] 2026-01-09 22:25:38,714 | INFO     | 
[2026-01-09 17:26:12] 2026-01-09 22:25:38,714 | INFO     | architecture information:
[2026-01-09 17:26:12] 2026-01-09 22:25:38,715 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:26:12] 2026-01-09 22:25:38,732 | INFO     | cat /etc/os-release:
[2026-01-09 17:26:12] NAME="CentOS Linux"
[2026-01-09 17:26:12] VERSION="7 (Core)"
[2026-01-09 17:26:12] ID="centos"
[2026-01-09 17:26:12] ID_LIKE="rhel fedora"
[2026-01-09 17:26:12] VERSION_ID="7"
[2026-01-09 17:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:26:12] ANSI_COLOR="0;31"
[2026-01-09 17:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:26:12] HOME_URL="https://www.centos.org/"
[2026-01-09 17:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:26:12] 
[2026-01-09 17:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:26:12] 
[2026-01-09 17:26:12] 2026-01-09 22:25:38,732 | INFO     | ***************************************
[2026-01-09 17:26:12] 2026-01-09 22:25:39,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 17:26:12] 2026-01-09 22:25:39,255 | INFO     | sufficient remaining disk space (18532532224 B)
[2026-01-09 17:26:12] 2026-01-09 22:25:39,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:26:12] 2026-01-09 22:25:39,256 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:26:12] 2026-01-09 22:25:39,256 | INFO     | update_server=False
[2026-01-09 17:26:12] 2026-01-09 22:25:39,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:26:12] 2026-01-09 22:25:39,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:26:12] 2026-01-09 22:25:39,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:26:12] 2026-01-09 22:25:39,725 | INFO     | all data control threads have been joined
[2026-01-09 17:26:12] 2026-01-09 22:25:39,848 | INFO     | all payload control threads have been joined
[2026-01-09 17:26:12] 2026-01-09 22:25:40,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:26:12] 2026-01-09 22:25:40,178 | INFO     | aborting loop
[2026-01-09 17:26:12] 2026-01-09 22:25:40,262 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,262 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,558 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,601 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,713 | INFO     | [job] validate thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,730 | INFO     | [data] control thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:40,830 | INFO     | all job control threads have been joined
[2026-01-09 17:26:12] 2026-01-09 22:25:40,852 | INFO     | [payload] control thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,184 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,284 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,516 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,526 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,551 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,684 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:41,836 | INFO     | [job] control thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:42,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:26:12] 2026-01-09 22:25:46,265 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:25:49,696 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:26:12] 2026-01-09 22:25:50,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:26:12] 2026-01-09 22:26:06,189 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:26:12] 2026-01-09 22:26:06,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836352964416)>', '<ExcThread(monitor, started 139835369039616)>']
[2026-01-09 17:26:12] 2026-01-09 22:26:09,588 | INFO     | PID=5509 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 17:26:12] 2026-01-09 22:26:09,589 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:26:12] 2026-01-09 22:26:09,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:26:12] 2026-01-09 22:26:09,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:26:12] 2026-01-09 22:26:09,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:26:12] 2026-01-09 22:26:09,589 | INFO     | [monitor] control thread has ended
[2026-01-09 17:26:12] 2026-01-09 22:26:11,751 | INFO     | all workflow threads have been joined
[2026-01-09 17:26:12] 2026-01-09 22:26:11,751 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:26:12] 2026-01-09 22:26:11,751 | INFO     | traces error code: 0
[2026-01-09 17:26:12] 2026-01-09 22:26:11,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:26:12] 2026-01-09 22:26:11,854 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:26:12] 2026-01-09 22:26:11,859 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:26:12] 2026-01-09 22:26:11,864 [wrapper] pilotpid: 5509
[2026-01-09 17:26:12] 2026-01-09 22:26:11,868 [wrapper] Pilot exit status: 0
[2026-01-09 17:26:12] 2026-01-09 22:26:11,887 [wrapper] pandaids: 6963188207
[2026-01-09 17:26:12] 2026-01-09 22:26:11,936 [wrapper] cleanup supervisor_pilot 17244 5510
[2026-01-09 17:26:12] 2026-01-09 22:26:11,941 [wrapper] Test setup, not cleaning
[2026-01-09 17:26:12] 2026-01-09 22:26:11,945 [wrapper] apfmon messages muted
[2026-01-09 17:26:12] 2026-01-09 22:26:11,950 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:26:12] 2026-01-09 22:26:11,954 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:26:12]  *** Error codes and diagnostics ***
[2026-01-09 17:26:12]     "exeErrorCode": 0,
[2026-01-09 17:26:12]     "exeErrorDiag": "",
[2026-01-09 17:26:12]     "pilotErrorCode": 0,
[2026-01-09 17:26:12]     "pilotErrorDiag": "",
[2026-01-09 17:26:12]  *** Listing of results directory ***
[2026-01-09 17:26:12] total 441804
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 17:26:12] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:26:12] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:53 run_atlas
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:53 job.xml
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas 224983752 Jan  9 14:53 EVNT.47898824._001433.pool.root.1
[2026-01-09 17:26:12] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:53 shared
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 14:53 input.tar.gz
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:53 start_atlas.sh
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:53 boinc_lockfile
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 14:53 pandaJob.out
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas        57 Jan  9 14:53 setup.sh.local
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas    989364 Jan  9 14:53 agis_schedconf.cvmfs.json
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas   1516240 Jan  9 14:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:26:12] drwx------ 5 boincer umatlas      4096 Jan  9 14:53 pilot3
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas      5908 Jan  9 17:20 init_data.xml
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas 220193491 Jan  9 17:24 HITS.47898826._037360.pool.root.1
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas       529 Jan  9 17:25 boinc_task_state.xml
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas      1047 Jan  9 17:25 memory_monitor_summary.json
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas    388059 Jan  9 17:25 log.47898826._037360.job.log.tgz.1
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas      7839 Jan  9 17:25 heartbeat.json
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas        95 Jan  9 17:26 pilot_heartbeat.json
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 17:26 boinc_mmap_file
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas      4817 Jan  9 17:26 pilotlog.txt
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas   1269225 Jan  9 17:26 log.47898826._037360.job.log.1
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas        27 Jan  9 17:26 wrapper_checkpoint.txt
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas       357 Jan  9 17:26 output.list
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas       620 Jan  9 17:26 runtime_log
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas   1679360 Jan  9 17:26 result.tar.gz
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas       659 Jan  9 17:26 w18NDmvEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt6gKDmdQQpam.diag
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas      9337 Jan  9 17:26 runtime_log.err
[2026-01-09 17:26:12] -rw-r--r-- 1 boincer umatlas     21268 Jan  9 17:26 stderr.txt
[2026-01-09 17:26:12] HITS file was successfully produced:
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas 220193491 Jan  9 17:24 shared/HITS.pool.root.1
[2026-01-09 17:26:12]  *** Contents of shared directory: ***
[2026-01-09 17:26:12] total 436988
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas 224983752 Jan  9 14:53 ATLAS.root_0
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 14:53 input.tar.gz
[2026-01-09 17:26:12] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:53 start_atlas.sh
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas 220193491 Jan  9 17:24 HITS.pool.root.1
[2026-01-09 17:26:12] -rw------- 1 boincer umatlas   1679360 Jan  9 17:26 result.tar.gz
17:26:13 (1616): run_atlas exited; CPU time 67693.727426
17:26:13 (1616): called boinc_finish(0)

</stderr_txt>
]]>

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