Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:07:46 (1199847): wrapper (7.7.26015): starting
12:07:46 (1199847): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 12:07:46] Arguments: --nthreads 4
[2026-01-10 12:07:46] Threads: 4
[2026-01-10 12:07:46] Checking for CVMFS
[2026-01-10 12:07:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:07:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:07:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:07:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:07:46] 2.9.2.0 157024 3620 92724 154976 2 57 22047922 36864001 0 130560 0 2692177 99.990 134791 3316 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 12:07:46] CVMFS is ok
[2026-01-10 12:07:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 12:07:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 12:07:46] Further information can be found at the LHC@home message board.
[2026-01-10 12:07:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:07:46] Checking for apptainer binary...
[2026-01-10 12:07:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:07:46] Running /usr/bin/apptainer --version
[2026-01-10 12:07:46] apptainer version 1.4.1-1.1
[2026-01-10 12:07:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:07:46] atlasA139
[2026-01-10 12:07:46] apptainer works
[2026-01-10 12:07:46] Set ATHENA_PROC_NUMBER=4
[2026-01-10 12:07:46] Set ATHENA_CORE_NUMBER=4
[2026-01-10 12:07:46] Starting ATLAS job with PandaID=6963194260
[2026-01-10 12:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:45:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:45:06]  lfn=log.47898826._039323.job.log.tgz.1
[2026-01-10 13:45:06]  mtime=0
[2026-01-10 13:45:06]  protocol_id=None
[2026-01-10 13:45:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 13:45:06]  replicas=None
[2026-01-10 13:45:06]  scope=mc23_13p6TeV
[2026-01-10 13:45:06]  status=None
[2026-01-10 13:45:06]  status_code=0
[2026-01-10 13:45:06]  storage_token=
[2026-01-10 13:45:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963194260/log.47898826._039323.job.log.tgz.1
[2026-01-10 13:45:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/4b/log.47898826._039323.job.log.tgz.1
[2026-01-10 13:45:06]  workdir=None
[2026-01-10 13:45:06] ]
[2026-01-10 13:45:06] 2026-01-10 12:44:07,923 | INFO     | transferring file log.47898826._039323.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963194260/log.47898826._039323.job.log.tgz.1 to /local/data/boinc/
[2026-01-10 13:45:06] 2026-01-10 12:44:07,924 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963194260/log.47898826._039323.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0393
[2026-01-10 13:45:06] 2026-01-10 12:44:07,942 | INFO     | adding to output.list: log.47898826._039323.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/4b/log.47898826._039323.job.log.tg
[2026-01-10 13:45:06] 2026-01-10 12:44:07,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 13:45:06] 2026-01-10 12:44:07,942 | INFO     | summary of transferred files:
[2026-01-10 13:45:06] 2026-01-10 12:44:07,942 | INFO     |  -- lfn=log.47898826._039323.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 13:45:06] 2026-01-10 12:44:07,942 | INFO     | stage-out finished correctly
[2026-01-10 13:45:06] 2026-01-10 12:44:09,034 | INFO     | monitor loop #442: job 0:6963194260 is in state 'finished'
[2026-01-10 13:45:06] 2026-01-10 12:44:09,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 13:45:06] 2026-01-10 12:44:09,206 | INFO     | job 6963194260 has state=finished
[2026-01-10 13:45:06] 2026-01-10 12:44:09,206 | INFO     | preparing for final server update for job 6963194260 in state='finished'
[2026-01-10 13:45:06] 2026-01-10 12:44:09,572 | INFO     | time since job start (5775s) is within the limit (349056.0s)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,788 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,788 | INFO     | this job has now completed (state=finished)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,788 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,789 | INFO     | log transfer has been attempted: DONE
[2026-01-10 13:45:06] 2026-01-10 12:44:09,789 | INFO     | job 6963194260 has finished - writing final server update
[2026-01-10 13:45:06] 2026-01-10 12:44:09,789 | INFO     | total number of processed events: 400 (read)
[2026-01-10 13:45:06] 2026-01-10 12:44:09,789 | INFO     | executing command: lscpu
[2026-01-10 13:45:06] 2026-01-10 12:44:09,808 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 13:45:06] 2026-01-10 12:44:11,537 | INFO     | monitor loop #443: job 0:6963194260 is in state 'finished'
[2026-01-10 13:45:06] 2026-01-10 12:44:11,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 13:45:06] 2026-01-10 12:44:11,577 | INFO     | time since job start (5777s) is within the limit (349056.0s)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,057 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 13:45:06] 2026-01-10 12:44:13,058 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3348.526125000001
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963194260/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | INFO     | extracted standard info from prmon json
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:45:06] 2026-01-10 12:44:13,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | sum of square deviations: 211285822.0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | sum of deviations: 614745769.5
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | mean x: 1768046254.5
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | mean y: 2400298.125
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | intersect: -5141811201.471954
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | chi2: 0.007070472183434842
[2026-01-10 13:45:06] 2026-01-10 12:44:13,061 | INFO     | current memory leak: 2.91 B/s (using 88 data points, chi2=0.01)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | could have reported an average CPU frequency of 3651 MHz (7 samples)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | ..............................
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . Timing measurements:
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . get job = 0 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . initial setup = 1 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . payload setup = 4 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . stage-in = 0 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . payload execution = 5751 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . stage-out = 0 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | . log creation = 0 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,062 | INFO     | ..............................
[2026-01-10 13:45:06] 2026-01-10 12:44:13,582 | INFO     | time since job start (5779s) is within the limit (349056.0s)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,585 | INFO     | 
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | job summary report
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | --------------------------------------------------
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | PanDA job id: 6963194260
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | task id: 47898826
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | errors: (none)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | pilot state: finished 
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | transexitcode: 0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | exeerrorcode: 0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | exeerrordiag: 
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | exitcode: 0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | exitmsg: OK
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | cpuconsumptiontime: 21934 s
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | nevents: 400
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | neventsw: 0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | pid: 1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | pgrp: 1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | corecount: 4
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | event service: False
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | sizes: {0: 2283974, 4: 2284236, 11: 2284264, 5759: 2311098, 5760: 2320102, 5761: 2320158, 5765: 2320480}
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | --------------------------------------------------
[2026-01-10 13:45:06] 2026-01-10 12:44:13,586 | INFO     | 
[2026-01-10 13:45:06] 2026-01-10 12:44:13,587 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | job 6963194260 has completed (purged errors)
[2026-01-10 13:45:06] 2026-01-10 12:44:13,607 | INFO     | overall cleanup function is called
[2026-01-10 13:45:06] 2026-01-10 12:44:14,614 | INFO     | --- collectZombieJob: --- 10, [1210209]
[2026-01-10 13:45:06] 2026-01-10 12:44:14,614 | INFO     | zombie collector waiting for pid 1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:14,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:45:06] 2026-01-10 12:44:14,615 | INFO     | collected zombie processes
[2026-01-10 13:45:06] 2026-01-10 12:44:14,615 | INFO     | will attempt to kill all subprocesses of pid=1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:14,661 | INFO     | process IDs to be killed: [1210209] (in reverse order)
[2026-01-10 13:45:06] 2026-01-10 12:44:14,693 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:45:06] 2026-01-10 12:44:14,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:45:06] 2026-01-10 12:44:14,695 | INFO     | did not find any defunct processes belonging to 1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:14,696 | INFO     | did not find any defunct processes belonging to 1210209
[2026-01-10 13:45:06] 2026-01-10 12:44:14,696 | INFO     | ready for new job
[2026-01-10 13:45:06] 2026-01-10 12:44:14,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:45:06] 2026-01-10 12:44:14,697 | INFO     | ***************************************
[2026-01-10 13:45:06] 2026-01-10 12:44:14,697 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:45:06] 2026-01-10 12:44:14,697 | INFO     | ***************************************
[2026-01-10 13:45:06] 2026-01-10 12:44:14,697 | INFO     | 
[2026-01-10 13:45:06] 2026-01-10 12:44:14,698 | INFO     | architecture information:
[2026-01-10 13:45:06] 2026-01-10 12:44:14,698 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:45:06] 2026-01-10 12:44:14,711 | INFO     | cat /etc/os-release:
[2026-01-10 13:45:06] NAME="CentOS Linux"
[2026-01-10 13:45:06] VERSION="7 (Core)"
[2026-01-10 13:45:06] ID="centos"
[2026-01-10 13:45:06] ID_LIKE="rhel fedora"
[2026-01-10 13:45:06] VERSION_ID="7"
[2026-01-10 13:45:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:45:06] ANSI_COLOR="0;31"
[2026-01-10 13:45:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:45:06] HOME_URL="https://www.centos.org/"
[2026-01-10 13:45:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:45:06] 
[2026-01-10 13:45:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:45:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:45:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:45:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:45:06] 
[2026-01-10 13:45:06] 2026-01-10 12:44:14,711 | INFO     | ***************************************
[2026-01-10 13:45:06] 2026-01-10 12:44:15,214 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | INFO     | sufficient remaining disk space (339434536960 B)
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | INFO     | update_server=False
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:45:06] 2026-01-10 12:44:15,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | INFO     | aborting loop
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:45:06] 2026-01-10 12:44:15,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:45:06] 2026-01-10 12:44:15,321 | INFO     | all data control threads have been joined
[2026-01-10 13:45:06] 2026-01-10 12:44:15,339 | INFO     | all payload control threads have been joined
[2026-01-10 13:45:06] 2026-01-10 12:44:15,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:45:06] 2026-01-10 12:44:16,026 | INFO     | all job control threads have been joined
[2026-01-10 13:45:06] 2026-01-10 12:44:16,238 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,238 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,315 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,327 | INFO     | [data] control thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,345 | INFO     | [payload] control thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,583 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:16,662 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:17,031 | INFO     | [job] control thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:17,474 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:17,546 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:17,624 | INFO     | [job] validate thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:17,709 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:18,000 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:18,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:45:06] 2026-01-10 12:44:19,119 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:19,239 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:44:26,262 | INFO     | job.realtimelogging is not enabled
[2026-01-10 13:45:06] 2026-01-10 12:44:27,268 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:45:06] 2026-01-10 12:45:00,721 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:45:06] 2026-01-10 12:45:01,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088131417920)>', '<ExcThread(monitor, started 140087220213504)>']
[2026-01-10 13:45:06] 2026-01-10 12:45:02,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:45:06] 2026-01-10 12:45:02,485 | INFO     | [monitor] control thread has ended
[2026-01-10 13:45:06] 2026-01-10 12:45:06,752 | INFO     | all workflow threads have been joined
[2026-01-10 13:45:06] 2026-01-10 12:45:06,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:45:06] 2026-01-10 12:45:06,753 | INFO     | traces error code: 0
[2026-01-10 13:45:06] 2026-01-10 12:45:06,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:45:06] 2026-01-10 12:45:06,824 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:45:06] 2026-01-10 12:45:06,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:45:06] 2026-01-10 12:45:06,832 [wrapper] pilotpid: 1203644
[2026-01-10 13:45:06] 2026-01-10 12:45:06,837 [wrapper] Pilot exit status: 0
[2026-01-10 13:45:06] 2026-01-10 12:45:06,849 [wrapper] pandaids: 6963194260
[2026-01-10 13:45:06] 2026-01-10 12:45:06,872 [wrapper] cleanup supervisor_pilot 1222717 1203645
[2026-01-10 13:45:06] 2026-01-10 12:45:06,875 [wrapper] Test setup, not cleaning
[2026-01-10 13:45:06] 2026-01-10 12:45:06,879 [wrapper] apfmon messages muted
[2026-01-10 13:45:06] 2026-01-10 12:45:06,882 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:45:06] 2026-01-10 12:45:06,886 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:45:06]  *** Error codes and diagnostics ***
[2026-01-10 13:45:06]     "exeErrorCode": 0,
[2026-01-10 13:45:06]     "exeErrorDiag": "",
[2026-01-10 13:45:06]     "pilotErrorCode": 0,
[2026-01-10 13:45:06]     "pilotErrorDiag": "",
[2026-01-10 13:45:06]  *** Listing of results directory ***
[2026-01-10 13:45:06] total 436948
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 13:45:06] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc       100 Jan 10 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:45:06] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 12:07 run_atlas
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc       105 Jan 10 12:07 job.xml
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc 223988559 Jan 10 12:07 EVNT.47898824._001511.pool.root.1
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc    592404 Jan 10 12:07 input.tar.gz
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:07 start_atlas.sh
[2026-01-10 13:45:06] drwxrwx--x 2 boinc boinc      4096 Jan 10 12:07 shared
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc         0 Jan 10 12:07 boinc_setup_complete
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc      6372 Jan 10 12:07 init_data.xml
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc         0 Jan 10 12:07 boinc_lockfile
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc      2520 Jan 10 12:07 pandaJob.out
[2026-01-10 13:45:06] -rw------- 1 boinc boinc    989548 Jan 10 12:07 agis_schedconf.cvmfs.json
[2026-01-10 13:45:06] -rw------- 1 boinc boinc   1516240 Jan 10 12:07 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:45:06] drwx------ 5 boinc boinc      4096 Jan 10 12:07 pilot3
[2026-01-10 13:45:06] -rw------- 1 boinc boinc        95 Jan 10 13:43 pilot_heartbeat.json
[2026-01-10 13:45:06] -rw------- 1 boinc boinc 217254126 Jan 10 13:43 HITS.47898826._039323.pool.root.1
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc       529 Jan 10 13:43 boinc_task_state.xml
[2026-01-10 13:45:06] -rw------- 1 boinc boinc      1018 Jan 10 13:44 memory_monitor_summary.json
[2026-01-10 13:45:06] -rw------- 1 boinc boinc    296876 Jan 10 13:44 log.47898826._039323.job.log.tgz.1
[2026-01-10 13:45:06] -rw------- 1 boinc boinc      7761 Jan 10 13:44 heartbeat.json
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc      8192 Jan 10 13:44 boinc_mmap_file
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc        27 Jan 10 13:44 wrapper_checkpoint.txt
[2026-01-10 13:45:06] -rw------- 1 boinc boinc      4628 Jan 10 13:45 pilotlog.txt
[2026-01-10 13:45:06] -rw------- 1 boinc boinc    841125 Jan 10 13:45 log.47898826._039323.job.log.1
[2026-01-10 13:45:06] -rw------- 1 boinc boinc       357 Jan 10 13:45 output.list
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc       620 Jan 10 13:45 runtime_log
[2026-01-10 13:45:06] -rw------- 1 boinc boinc   1157120 Jan 10 13:45 result.tar.gz
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc      8912 Jan 10 13:45 runtime_log.err
[2026-01-10 13:45:06] -rw------- 1 boinc boinc       662 Jan 10 13:45 qbNODm4CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaFmKDmlYgENm.diag
[2026-01-10 13:45:06] -rw-r--r-- 1 boinc boinc     21584 Jan 10 13:45 stderr.txt
[2026-01-10 13:45:06] HITS file was successfully produced:
[2026-01-10 13:45:06] -rw------- 1 boinc boinc 217254126 Jan 10 13:43 shared/HITS.pool.root.1
[2026-01-10 13:45:06]  *** Contents of shared directory: ***
[2026-01-10 13:45:06] total 432640
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc 223988559 Jan 10 12:07 ATLAS.root_0
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc    592404 Jan 10 12:07 input.tar.gz
[2026-01-10 13:45:06] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:07 start_atlas.sh
[2026-01-10 13:45:06] -rw------- 1 boinc boinc 217254126 Jan 10 13:43 HITS.pool.root.1
[2026-01-10 13:45:06] -rw------- 1 boinc boinc   1157120 Jan 10 13:45 result.tar.gz
13:45:08 (1199847): run_atlas exited; CPU time 21954.259019
13:45:08 (1199847): called boinc_finish(0)

</stderr_txt>
]]>

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