Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:12:04 (643663): wrapper (7.7.26015): starting
04:12:04 (643663): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 04:12:04] Arguments: --nthreads 4
[2026-01-10 04:12:04] Threads: 4
[2026-01-10 04:12:04] Checking for CVMFS
[2026-01-10 04:12:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:12:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:12:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:12:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:12:04] 2.9.2.0 3067 2258 93904 154965 2 56 21175858 36864001 0 130560 0 1665932 99.990 79803 4751 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 04:12:04] CVMFS is ok
[2026-01-10 04:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:12:04] Further information can be found at the LHC@home message board.
[2026-01-10 04:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:12:04] Checking for apptainer binary...
[2026-01-10 04:12:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:12:04] Running /usr/bin/apptainer --version
[2026-01-10 04:12:04] apptainer version 1.4.1-1.1
[2026-01-10 04:12:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:12:04] thA383a
[2026-01-10 04:12:04] apptainer works
[2026-01-10 04:12:04] Set ATHENA_PROC_NUMBER=4
[2026-01-10 04:12:04] Set ATHENA_CORE_NUMBER=4
[2026-01-10 04:12:04] Starting ATLAS job with PandaID=6963471230
[2026-01-10 04:12:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:50:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:50:24] 2026-01-10 04:49:32,257 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:50:24] 2026-01-10 04:49:32,257 | INFO     | update_server=False
[2026-01-10 05:50:24] 2026-01-10 04:49:32,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:50:24] 2026-01-10 04:49:32,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:50:24] 2026-01-10 04:49:32,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:50:24] 2026-01-10 04:49:32,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:50:24] 2026-01-10 04:49:32,477 | INFO     | aborting loop
[2026-01-10 05:50:24] 2026-01-10 04:49:32,834 | INFO     | all job control threads have been joined
[2026-01-10 05:50:24] 2026-01-10 04:49:32,949 | INFO     | all payload control threads have been joined
[2026-01-10 05:50:24] 2026-01-10 04:49:33,045 | INFO     | all data control threads have been joined
[2026-01-10 05:50:24] 2026-01-10 04:49:33,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:50:24] 2026-01-10 04:49:33,262 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,263 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,483 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,540 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,729 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,839 | INFO     | [job] control thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,941 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:33,954 | INFO     | [payload] control thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:34,051 | INFO     | [data] control thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:34,505 | INFO     | [job] validate thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:34,538 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:34,573 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:34,697 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:35,200 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:36,264 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:49:42,322 | INFO     | job.realtimelogging is not enabled
[2026-01-10 05:50:24] 2026-01-10 04:49:43,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:50:24] 2026-01-10 04:50:03,229 | INFO     | PID=647471 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 05:50:24] 2026-01-10 04:50:03,230 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:50:24] 2026-01-10 04:50:03,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:50:24] 2026-01-10 04:50:03,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:50:24] 2026-01-10 04:50:18,971 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:50:24] 2026-01-10 04:50:19,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685709596480)>', '<ExcThread(monitor, started 139684919359232)>']
[2026-01-10 05:50:24] 2026-01-10 04:50:20,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:50:24] 2026-01-10 04:50:20,321 | INFO     | [monitor] control thread has ended
[2026-01-10 05:50:24] 2026-01-10 04:50:24,527 | INFO     | all workflow threads have been joined
[2026-01-10 05:50:24] 2026-01-10 04:50:24,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:50:24] 2026-01-10 04:50:24,528 | INFO     | traces error code: 0
[2026-01-10 05:50:24] 2026-01-10 04:50:24,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:50:24] 2026-01-10 04:50:24,608 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:50:24] 2026-01-10 04:50:24,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:50:24] 2026-01-10 04:50:24,616 [wrapper] pilotpid: 647471
[2026-01-10 05:50:24] 2026-01-10 04:50:24,620 [wrapper] Pilot exit status: 0
[2026-01-10 05:50:24] 2026-01-10 04:50:24,633 [wrapper] pandaids: 6963471230
[2026-01-10 05:50:24] 2026-01-10 04:50:24,655 [wrapper] cleanup supervisor_pilot  666318 647472
[2026-01-10 05:50:24] 2026-01-10 04:50:24,659 [wrapper] Test setup, not cleaning
[2026-01-10 05:50:24] 2026-01-10 04:50:24,663 [wrapper] apfmon messages muted
[2026-01-10 05:50:24] 2026-01-10 04:50:24,667 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:50:24] 2026-01-10 04:50:24,671 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:50:24]  *** Error codes and diagnostics ***
[2026-01-10 05:50:24]     "exeErrorCode": 0,
[2026-01-10 05:50:24]     "exeErrorDiag": "",
[2026-01-10 05:50:24]     "pilotErrorCode": 0,
[2026-01-10 05:50:24]     "pilotErrorDiag": "",
[2026-01-10 05:50:24]  *** Listing of results directory ***
[2026-01-10 05:50:24] total 440888
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 05:50:24] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc       100 Jan 10 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:50:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 04:12 run_atlas
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc       105 Jan 10 04:12 job.xml
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc 225143893 Jan 10 04:12 EVNT.47898824._000513.pool.root.1
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc    592403 Jan 10 04:12 input.tar.gz
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:12 start_atlas.sh
[2026-01-10 05:50:24] drwxrwx--x 2 boinc boinc      4096 Jan 10 04:12 shared
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc         0 Jan 10 04:12 boinc_setup_complete
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      6377 Jan 10 04:12 init_data.xml
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc         0 Jan 10 04:12 boinc_lockfile
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      2517 Jan 10 04:12 pandaJob.out
[2026-01-10 05:50:24] -rw------- 1 boinc boinc    989382 Jan 10 04:12 agis_schedconf.cvmfs.json
[2026-01-10 05:50:24] -rw------- 1 boinc boinc   1516240 Jan 10 04:12 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:50:24] drwx------ 5 boinc boinc      4096 Jan 10 04:12 pilot3
[2026-01-10 05:50:24] -rw------- 1 boinc boinc 220182191 Jan 10 05:49 HITS.47898826._039618.pool.root.1
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc       529 Jan 10 05:49 boinc_task_state.xml
[2026-01-10 05:50:24] -rw------- 1 boinc boinc      1021 Jan 10 05:49 memory_monitor_summary.json
[2026-01-10 05:50:24] -rw------- 1 boinc boinc    277268 Jan 10 05:49 log.47898826._039618.job.log.tgz.1
[2026-01-10 05:50:24] -rw------- 1 boinc boinc      7762 Jan 10 05:49 heartbeat.json
[2026-01-10 05:50:24] -rw------- 1 boinc boinc        95 Jan 10 05:50 pilot_heartbeat.json
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc        27 Jan 10 05:50 wrapper_checkpoint.txt
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      8192 Jan 10 05:50 boinc_mmap_file
[2026-01-10 05:50:24] -rw------- 1 boinc boinc      4823 Jan 10 05:50 pilotlog.txt
[2026-01-10 05:50:24] -rw------- 1 boinc boinc    847270 Jan 10 05:50 log.47898826._039618.job.log.1
[2026-01-10 05:50:24] -rw------- 1 boinc boinc       357 Jan 10 05:50 output.list
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc       620 Jan 10 05:50 runtime_log
[2026-01-10 05:50:24] -rw------- 1 boinc boinc   1146880 Jan 10 05:50 result.tar.gz
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      8902 Jan 10 05:50 runtime_log.err
[2026-01-10 05:50:24] -rw------- 1 boinc boinc       660 Jan 10 05:50 MfYNDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT3gKDmjfpMOo.diag
[2026-01-10 05:50:24] -rw-r--r-- 1 boinc boinc      7605 Jan 10 05:50 stderr.txt
[2026-01-10 05:50:24] HITS file was successfully produced:
[2026-01-10 05:50:24] -rw------- 1 boinc boinc 220182191 Jan 10 05:49 shared/HITS.pool.root.1
[2026-01-10 05:50:24]  *** Contents of shared directory: ***
[2026-01-10 05:50:24] total 436612
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc 225143893 Jan 10 04:12 ATLAS.root_0
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc    592403 Jan 10 04:12 input.tar.gz
[2026-01-10 05:50:24] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:12 start_atlas.sh
[2026-01-10 05:50:24] -rw------- 1 boinc boinc 220182191 Jan 10 05:49 HITS.pool.root.1
[2026-01-10 05:50:24] -rw------- 1 boinc boinc   1146880 Jan 10 05:50 result.tar.gz
05:50:26 (643663): run_atlas exited; CPU time 22353.197681
05:50:26 (643663): called boinc_finish(0)

</stderr_txt>
]]>

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