Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:13 (2203028): wrapper (7.7.26015): starting
15:39:13 (2203028): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:39:13] Arguments: --nthreads 8
[2026-01-09 15:39:13] Threads: 8
[2026-01-09 15:39:13] Checking for CVMFS
[2026-01-09 15:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:39:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:39:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:39:15] 2.13.3.0 12275 93899 366296 154956 2 339 35289826 40960000 15999 16776704 25 436935141 99.627 431656673 37150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 15:39:15] CVMFS is ok
[2026-01-09 15:39:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:39:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:39:15] Further information can be found at the LHC@home message board.
[2026-01-09 15:39:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:39:15] Checking for apptainer binary...
[2026-01-09 15:39:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:39:15] Running /usr/bin/apptainer --version
[2026-01-09 15:39:15] apptainer version 1.4.5-2.el9
[2026-01-09 15:39:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:39:16] c7-11-11.aglt2.org
[2026-01-09 15:39:16] apptainer works
[2026-01-09 15:39:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:39:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:39:16] Starting ATLAS job with PandaID=6963681037
[2026-01-09 15:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:00:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:00:53] 2026-01-10 02:00:13,097 | INFO     | time since job start (19199s) is within the limit (349056.0s)
[2026-01-09 21:00:53] 2026-01-10 02:00:13,465 | INFO     | monitor loop #1231: job 0:6963681037 is in state 'finished'
[2026-01-09 21:00:53] 2026-01-10 02:00:13,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:00:53] 2026-01-10 02:00:15,108 | INFO     | time since job start (19201s) is within the limit (349056.0s)
[2026-01-09 21:00:53] 2026-01-10 02:00:15,970 | INFO     | monitor loop #1232: job 0:6963681037 is in state 'finished'
[2026-01-09 21:00:53] 2026-01-10 02:00:15,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:00:53] 2026-01-10 02:00:17,115 | INFO     | time since job start (19203s) is within the limit (349056.0s)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,361 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:00:53] 2026-01-10 02:00:18,374 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.817609375
[2026-01-09 21:00:53] 2026-01-10 02:00:18,383 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963681037/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,384 | INFO     | extracted standard info from prmon json
[2026-01-09 21:00:53] 2026-01-10 02:00:18,384 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:00:53] 2026-01-10 02:00:18,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:00:53] 2026-01-10 02:00:18,385 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:00:53] 2026-01-10 02:00:18,385 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:00:53] 2026-01-10 02:00:18,388 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:00:53] 2026-01-10 02:00:18,388 | INFO     | sum of square deviations: 9508755987.693357
[2026-01-09 21:00:53] 2026-01-10 02:00:18,390 | INFO     | sum of deviations: 49005013874.04792
[2026-01-09 21:00:53] 2026-01-10 02:00:18,390 | INFO     | mean x: 1768000857.7156549
[2026-01-09 21:00:53] 2026-01-10 02:00:18,391 | INFO     | mean y: 2517991.888178914
[2026-01-09 21:00:53] 2026-01-10 02:00:18,391 | INFO     | intersect: -9109179339.899353
[2026-01-09 21:00:53] 2026-01-10 02:00:18,391 | INFO     | chi2: 3.5135110292434883
[2026-01-09 21:00:53] 2026-01-10 02:00:18,391 | INFO     | sum of square deviations: 9060387990.090864
[2026-01-09 21:00:53] 2026-01-10 02:00:18,393 | INFO     | sum of deviations: 46357232529.50003
[2026-01-09 21:00:53] 2026-01-10 02:00:18,393 | INFO     | mean x: 1768000705.2272727
[2026-01-09 21:00:53] 2026-01-10 02:00:18,393 | INFO     | mean y: 2517095.964285714
[2026-01-09 21:00:53] 2026-01-10 02:00:18,393 | INFO     | intersect: -9043411168.275398
[2026-01-09 21:00:53] 2026-01-10 02:00:18,394 | INFO     | chi2: 3.5113368558509723
[2026-01-09 21:00:53] 2026-01-10 02:00:18,394 | INFO     | current chi2=3.5113368558509723 (change=0.06188036338636891 %)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,394 | INFO     | right removable region: 307
[2026-01-09 21:00:53] 2026-01-10 02:00:18,394 | INFO     | sum of square deviations: 9060251350.090864
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | sum of deviations: -40970652359.36362
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | mean x: 1768001010.2272727
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | mean y: 2548526.162337662
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | intersect: 7997487293.539781
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | chi2: 0.38658797696878616
[2026-01-09 21:00:53] 2026-01-10 02:00:18,396 | INFO     | current chi2=0.38658797696878616 (change=88.99710364501048 %)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,397 | INFO     | sum of square deviations: 8626072562.402609
[2026-01-09 21:00:53] 2026-01-10 02:00:18,398 | INFO     | sum of deviations: -46206648425.53138
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | mean x: 1768001162.739274
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | mean y: 2550332.221122112
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | intersect: 9473072119.701933
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | chi2: 0.3283460097358532
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | current chi2=0.3283460097358532 (change=15.065643709254703 %)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | left removable region: 20
[2026-01-09 21:00:53] 2026-01-10 02:00:18,399 | INFO     | sum of square deviations: 7330587979.937301
[2026-01-09 21:00:53] 2026-01-10 02:00:18,401 | INFO     | sum of deviations: -22650291361.222996
[2026-01-09 21:00:53] 2026-01-10 02:00:18,401 | INFO     | mean x: 1768001284.7491288
[2026-01-09 21:00:53] 2026-01-10 02:00:18,401 | INFO     | mean y: 2540461.1080139372
[2026-01-09 21:00:53] 2026-01-10 02:00:18,401 | INFO     | intersect: 5465368863.984213
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | chi2: 0.2423924335458699
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | current memory leak: -3.09 B/s (using 287 data points, chi2=0.24)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | could have reported an average CPU frequency of 3291 MHz (14 samples)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | ..............................
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | . Timing measurements:
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | . get job = 0 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | . initial setup = 4 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,402 | INFO     | . payload setup = 39 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,403 | INFO     | . stage-in = 0 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,403 | INFO     | . payload execution = 19080 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,403 | INFO     | . stage-out = 2 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,403 | INFO     | . log creation = 0 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,403 | INFO     | ..............................
[2026-01-09 21:00:53] 2026-01-10 02:00:18,467 | INFO     | 
[2026-01-09 21:00:53] 2026-01-10 02:00:18,467 | INFO     | job summary report
[2026-01-09 21:00:53] 2026-01-10 02:00:18,467 | INFO     | --------------------------------------------------
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | PanDA job id: 6963681037
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | task id: 47898826
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | errors: (none)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | pilot state: finished 
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | transexitcode: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | exeerrorcode: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | exeerrordiag: 
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | exitcode: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | exitmsg: OK
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | cpuconsumptiontime: 46176 s
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | nevents: 400
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | neventsw: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | pid: 2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | pgrp: 2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | corecount: 8
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | event service: False
[2026-01-09 21:00:53] 2026-01-10 02:00:18,468 | INFO     | sizes: {0: 2283091, 1: 2283776, 2: 2283975, 3: 2284003, 14: 2284003, 25: 2284031, 36: 2284187, 39: 2284477, 47: 2284505, 19123: 2317530, 19127: 2326528, 19129: 232
[2026-01-09 21:00:53] 2026-01-10 02:00:18,469 | INFO     | --------------------------------------------------
[2026-01-09 21:00:53] 2026-01-10 02:00:18,469 | INFO     | 
[2026-01-09 21:00:53] 2026-01-10 02:00:18,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 21:00:53] 2026-01-10 02:00:18,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,489 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,489 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,489 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,490 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:00:53] 2026-01-10 02:00:18,491 | INFO     | job 6963681037 has completed (purged errors)
[2026-01-09 21:00:53] 2026-01-10 02:00:18,491 | INFO     | overall cleanup function is called
[2026-01-09 21:00:53] 2026-01-10 02:00:19,500 | INFO     | --- collectZombieJob: --- 10, [2219006]
[2026-01-09 21:00:53] 2026-01-10 02:00:19,500 | INFO     | zombie collector waiting for pid 2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:19,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:00:53] 2026-01-10 02:00:19,500 | INFO     | collected zombie processes
[2026-01-09 21:00:53] 2026-01-10 02:00:19,500 | INFO     | will attempt to kill all subprocesses of pid=2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:19,930 | INFO     | process IDs to be killed: [2219006] (in reverse order)
[2026-01-09 21:00:53] 2026-01-10 02:00:20,054 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:00:53] 2026-01-10 02:00:20,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:00:53] 2026-01-10 02:00:20,068 | INFO     | did not find any defunct processes belonging to 2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:20,078 | INFO     | did not find any defunct processes belonging to 2219006
[2026-01-09 21:00:53] 2026-01-10 02:00:20,079 | INFO     | ready for new job
[2026-01-09 21:00:53] 2026-01-10 02:00:20,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:00:53] 2026-01-10 02:00:20,082 | INFO     | ***************************************
[2026-01-09 21:00:53] 2026-01-10 02:00:20,082 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:00:53] 2026-01-10 02:00:20,082 | INFO     | ***************************************
[2026-01-09 21:00:53] 2026-01-10 02:00:20,082 | INFO     | 
[2026-01-09 21:00:53] 2026-01-10 02:00:20,092 | INFO     | architecture information:
[2026-01-09 21:00:53] 2026-01-10 02:00:20,093 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:00:53] 2026-01-10 02:00:20,108 | INFO     | cat /etc/os-release:
[2026-01-09 21:00:53] NAME="CentOS Linux"
[2026-01-09 21:00:53] VERSION="7 (Core)"
[2026-01-09 21:00:53] ID="centos"
[2026-01-09 21:00:53] ID_LIKE="rhel fedora"
[2026-01-09 21:00:53] VERSION_ID="7"
[2026-01-09 21:00:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:00:53] ANSI_COLOR="0;31"
[2026-01-09 21:00:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:00:53] HOME_URL="https://www.centos.org/"
[2026-01-09 21:00:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:00:53] 
[2026-01-09 21:00:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:00:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:00:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:00:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:00:53] 
[2026-01-09 21:00:53] 2026-01-10 02:00:20,108 | INFO     | ***************************************
[2026-01-09 21:00:53] 2026-01-10 02:00:20,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 21:00:53] 2026-01-10 02:00:20,630 | INFO     | sufficient remaining disk space (84589674496 B)
[2026-01-09 21:00:53] 2026-01-10 02:00:20,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:00:53] 2026-01-10 02:00:20,631 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:00:53] 2026-01-10 02:00:20,631 | INFO     | update_server=False
[2026-01-09 21:00:53] 2026-01-10 02:00:20,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:00:53] 2026-01-10 02:00:20,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:00:53] 2026-01-10 02:00:20,981 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:00:53] 2026-01-10 02:00:20,981 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:00:53] 2026-01-10 02:00:20,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:00:53] 2026-01-10 02:00:20,981 | INFO     | will abort loop
[2026-01-09 21:00:53] 2026-01-10 02:00:21,066 | INFO     | all payload control threads have been joined
[2026-01-09 21:00:53] 2026-01-10 02:00:21,370 | INFO     | all data control threads have been joined
[2026-01-09 21:00:53] 2026-01-10 02:00:21,636 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:21,700 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:21,752 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:21,833 | INFO     | all job control threads have been joined
[2026-01-09 21:00:53] 2026-01-10 02:00:21,880 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:21,987 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,074 | INFO     | [payload] control thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,376 | INFO     | [data] control thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:00:53] 2026-01-10 02:00:22,591 | INFO     | [job] validate thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,622 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,638 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,641 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,644 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,839 | INFO     | [job] control thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:22,888 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:23,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:00:53] 2026-01-10 02:00:24,487 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:26,589 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:00:53] 2026-01-10 02:00:47,242 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:00:53] 2026-01-10 02:00:47,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233674397504)>', '<ExcThread(monitor, started 140232880019200)>']
[2026-01-09 21:00:53] 2026-01-10 02:00:50,601 | INFO     | PID=2210040 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:00:53] 2026-01-10 02:00:50,604 | INFO     | .. there are 17 such processes running
[2026-01-09 21:00:53] 2026-01-10 02:00:50,605 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:00:53] 2026-01-10 02:00:50,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:00:53] 2026-01-10 02:00:50,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:00:53] 2026-01-10 02:00:50,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:00:53] 2026-01-10 02:00:50,605 | INFO     | [monitor] control thread has ended
[2026-01-09 21:00:53] 2026-01-10 02:00:52,842 | INFO     | all workflow threads have been joined
[2026-01-09 21:00:53] 2026-01-10 02:00:52,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:00:53] 2026-01-10 02:00:52,842 | INFO     | traces error code: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:52,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:00:53] 2026-01-10 02:00:52,964 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:00:53] 2026-01-10 02:00:52,966 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:00:53] 2026-01-10 02:00:52,968 [wrapper] pilotpid: 2210040
[2026-01-09 21:00:53] 2026-01-10 02:00:52,971 [wrapper] Pilot exit status: 0
[2026-01-09 21:00:53] 2026-01-10 02:00:53,053 [wrapper] pandaids: 6963681037
[2026-01-09 21:00:53] 2026-01-10 02:00:53,134 [wrapper] cleanup supervisor_pilot 3360423 2210041
[2026-01-09 21:00:53] 2026-01-10 02:00:53,153 [wrapper] Test setup, not cleaning
[2026-01-09 21:00:53] 2026-01-10 02:00:53,158 [wrapper] apfmon messages muted
[2026-01-09 21:00:53] 2026-01-10 02:00:53,176 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:00:53] 2026-01-10 02:00:53,180 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:00:53]  *** Error codes and diagnostics ***
[2026-01-09 21:00:53]     "exeErrorCode": 0,
[2026-01-09 21:00:53]     "exeErrorDiag": "",
[2026-01-09 21:00:53]     "pilotErrorCode": 0,
[2026-01-09 21:00:53]     "pilotErrorDiag": "",
[2026-01-09 21:00:53]  *** Listing of results directory ***
[2026-01-09 21:00:53] total 447568
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 21:00:53] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:26 queuedata.json
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:00:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:39 run_atlas
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:39 job.xml
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas 225766267 Jan  9 15:39 EVNT.47898824._001033.pool.root.1
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:39 start_atlas.sh
[2026-01-09 21:00:53] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:39 shared
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas    610541 Jan  9 15:39 input.tar.gz
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:39 boinc_lockfile
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 15:39 pandaJob.out
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas        57 Jan  9 15:39 setup.sh.local
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas    989381 Jan  9 15:40 agis_schedconf.cvmfs.json
[2026-01-09 21:00:53] drwx------. 7 boincer umatlas      4096 Jan  9 15:40 pilot3
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 20:55 init_data.xml
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas 222530644 Jan  9 20:59 HITS.47898826._039719.pool.root.1
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas       530 Jan  9 20:59 boinc_task_state.xml
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas      1032 Jan  9 21:00 memory_monitor_summary.json
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:00 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas    538128 Jan  9 21:00 log.47898826._039719.job.log.tgz.1
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas      7778 Jan  9 21:00 heartbeat.json
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:00 boinc_mmap_file
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:00 wrapper_checkpoint.txt
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas        95 Jan  9 21:00 pilot_heartbeat.json
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas      5010 Jan  9 21:00 pilotlog.txt
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas   2489730 Jan  9 21:00 log.47898826._039719.job.log.1
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas       357 Jan  9 21:00 output.list
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:00 runtime_log
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas   3051520 Jan  9 21:00 result.tar.gz
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 21:00 runtime_log.err
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas       657 Jan  9 21:00 Ie8MDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2GmKDmHe7fZn.diag
[2026-01-09 21:00:53] -rw-r--r--. 1 boincer umatlas     21429 Jan  9 21:00 stderr.txt
[2026-01-09 21:00:53] HITS file was successfully produced:
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas 222530644 Jan  9 20:59 shared/HITS.pool.root.1
[2026-01-09 21:00:53]  *** Contents of shared directory: ***
[2026-01-09 21:00:53] total 441396
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas 225766267 Jan  9 15:39 ATLAS.root_0
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:39 start_atlas.sh
[2026-01-09 21:00:53] -rw-r--r--. 2 boincer umatlas    610541 Jan  9 15:39 input.tar.gz
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas 222530644 Jan  9 20:59 HITS.pool.root.1
[2026-01-09 21:00:53] -rw-------. 1 boincer umatlas   3051520 Jan  9 21:00 result.tar.gz
21:00:54 (2203028): run_atlas exited; CPU time 46491.936397
21:00:54 (2203028): called boinc_finish(0)

</stderr_txt>
]]>

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