Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:36:57 (11719): wrapper (7.7.26015): starting
14:36:57 (11719): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:36:57] Arguments: --nthreads 8
[2026-01-09 14:36:57] Threads: 8
[2026-01-09 14:36:57] Checking for CVMFS
[2026-01-09 14:36:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:36:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:36:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:36:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:36:57] 2.11.2.0 2795 111206 82476 154955 2 59 12749065 20275200 1 130560 0 22468599 99.768 7151106 29213 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 14:36:57] CVMFS is ok
[2026-01-09 14:36:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:36:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:36:57] Further information can be found at the LHC@home message board.
[2026-01-09 14:36:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:36:57] Checking for apptainer binary...
[2026-01-09 14:36:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:36:57] Running /usr/bin/apptainer --version
[2026-01-09 14:36:57] apptainer version 1.3.2-1.el7
[2026-01-09 14:36:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:36:59] c-204-18.aglt2.org
[2026-01-09 14:36:59] apptainer works
[2026-01-09 14:36:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:36:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:36:59] Starting ATLAS job with PandaID=6963161804
[2026-01-09 14:36:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:31:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:31:39] 2026-01-09 22:30:42,773 | INFO     | time since job start (10405s) is within the limit (349056.0s)
[2026-01-09 17:31:39] 2026-01-09 22:30:44,474 | WARNING  | process 21860 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 17:31:39] 2026-01-09 22:30:44,474 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161804/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:31:39] 2026-01-09 22:30:44,563 | INFO     | number of running child processes to parent process 21860: 1
[2026-01-09 17:31:39] 2026-01-09 22:30:44,563 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:31:39] 2026-01-09 22:30:44,778 | INFO     | time since job start (10407s) is within the limit (349056.0s)
[2026-01-09 17:31:39] 2026-01-09 22:30:46,784 | INFO     | time since job start (10409s) is within the limit (349056.0s)
[2026-01-09 17:31:39] 2026-01-09 22:30:47,066 | INFO     | monitor loop #763: job 0:6963161804 is in state 'finished'
[2026-01-09 17:31:39] 2026-01-09 22:30:47,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,410 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 17:31:39] 2026-01-09 22:30:48,414 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 17:31:39] 2026-01-09 22:30:48,416 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161804/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,416 | INFO     | extracted standard info from prmon json
[2026-01-09 17:31:39] 2026-01-09 22:30:48,416 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:31:39] 2026-01-09 22:30:48,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:31:39] 2026-01-09 22:30:48,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:31:39] 2026-01-09 22:30:48,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:31:39] 2026-01-09 22:30:48,421 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:31:39] 2026-01-09 22:30:48,421 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 17:31:39] 2026-01-09 22:30:48,422 | INFO     | sum of deviations: -1706537738.4999893
[2026-01-09 17:31:39] 2026-01-09 22:30:48,423 | INFO     | mean x: 1767992622.5
[2026-01-09 17:31:39] 2026-01-09 22:30:48,423 | INFO     | mean y: 2523907.4529411765
[2026-01-09 17:31:39] 2026-01-09 22:30:48,423 | INFO     | intersect: 1983075612.8961067
[2026-01-09 17:31:39] 2026-01-09 22:30:48,423 | INFO     | chi2: 1.597625681609926
[2026-01-09 17:31:39] 2026-01-09 22:30:48,424 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,424 | INFO     | sum of deviations: -1532948910.000001
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | mean x: 1767992470.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | mean y: 2524110.3636363638
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | intersect: 1948304345.860488
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | chi2: 1.5977017434037781
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | current chi2=1.5977017434037781 (change=-0.00476092708872675 %)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,425 | INFO     | right removable region: 164
[2026-01-09 17:31:39] 2026-01-09 22:30:48,426 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | sum of deviations: -26583196466.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | mean x: 1767992775.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | mean y: 2552571.0242424244
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | intersect: 33744751587.342545
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | chi2: 0.1801105779212725
[2026-01-09 17:31:39] 2026-01-09 22:30:48,427 | INFO     | current chi2=0.1801105779212725 (change=88.72635937225452 %)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,428 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,428 | INFO     | sum of deviations: -27063288029.499996
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | mean x: 1767992927.5
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | mean y: 2553104.44375
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | intersect: 37676374632.79175
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | chi2: 0.15681788330281696
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | current chi2=0.15681788330281696 (change=12.93244121877002 %)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,429 | INFO     | left removable region: 20
[2026-01-09 17:31:39] 2026-01-09 22:30:48,430 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,430 | INFO     | sum of deviations: -16446362957.499998
[2026-01-09 17:31:39] 2026-01-09 22:30:48,431 | INFO     | mean x: 1767993049.5
[2026-01-09 17:31:39] 2026-01-09 22:30:48,431 | INFO     | mean y: 2540318.840277778
[2026-01-09 17:31:39] 2026-01-09 22:30:48,431 | INFO     | intersect: 31408022675.449806
[2026-01-09 17:31:39] 2026-01-09 22:30:48,431 | INFO     | chi2: 0.13277436075823879
[2026-01-09 17:31:39] 2026-01-09 22:30:48,431 | INFO     | current memory leak: -17.76 B/s (using 144 data points, chi2=0.13)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | could have reported an average CPU frequency of 2017 MHz (9 samples)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | ..............................
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . Timing measurements:
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . get job = 0 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . initial setup = 2 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . payload setup = 8 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . stage-in = 0 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,432 | INFO     | . payload execution = 10371 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,433 | INFO     | . stage-out = 0 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,433 | INFO     | . log creation = 0 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,433 | INFO     | ..............................
[2026-01-09 17:31:39] 2026-01-09 22:30:48,522 | INFO     | 
[2026-01-09 17:31:39] 2026-01-09 22:30:48,523 | INFO     | job summary report
[2026-01-09 17:31:39] 2026-01-09 22:30:48,523 | INFO     | --------------------------------------------------
[2026-01-09 17:31:39] 2026-01-09 22:30:48,523 | INFO     | PanDA job id: 6963161804
[2026-01-09 17:31:39] 2026-01-09 22:30:48,523 | INFO     | task id: 47898826
[2026-01-09 17:31:39] 2026-01-09 22:30:48,523 | INFO     | errors: (none)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:31:39] 2026-01-09 22:30:48,524 | INFO     | pilot state: finished 
[2026-01-09 17:31:39] 2026-01-09 22:30:48,524 | INFO     | transexitcode: 0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,524 | INFO     | exeerrorcode: 0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,524 | INFO     | exeerrordiag: 
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | exitcode: 0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | exitmsg: OK
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | cpuconsumptiontime: 77536 s
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | nevents: 400
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | neventsw: 0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,525 | INFO     | pid: 21860
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | pgrp: 21860
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | corecount: 8
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | event service: False
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | sizes: {0: 2283799, 1: 2283998, 7: 2284260, 12: 2284288, 10384: 2313017, 10385: 2322015, 10387: 2322199, 10395: 2322457}
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | --------------------------------------------------
[2026-01-09 17:31:39] 2026-01-09 22:30:48,526 | INFO     | 
[2026-01-09 17:31:39] 2026-01-09 22:30:48,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 17:31:39] 2026-01-09 22:30:48,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,558 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:31:39] 2026-01-09 22:30:48,559 | INFO     | job 6963161804 has completed (purged errors)
[2026-01-09 17:31:39] 2026-01-09 22:30:48,559 | INFO     | overall cleanup function is called
[2026-01-09 17:31:39] 2026-01-09 22:30:49,567 | INFO     | --- collectZombieJob: --- 10, [21860]
[2026-01-09 17:31:39] 2026-01-09 22:30:49,568 | INFO     | zombie collector waiting for pid 21860
[2026-01-09 17:31:39] 2026-01-09 22:30:49,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:31:39] 2026-01-09 22:30:49,568 | INFO     | collected zombie processes
[2026-01-09 17:31:39] 2026-01-09 22:30:49,568 | INFO     | will attempt to kill all subprocesses of pid=21860
[2026-01-09 17:31:39] 2026-01-09 22:30:49,659 | INFO     | process IDs to be killed: [21860] (in reverse order)
[2026-01-09 17:31:39] 2026-01-09 22:30:49,718 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:31:39] 2026-01-09 22:30:49,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:31:39] 2026-01-09 22:30:49,723 | INFO     | did not find any defunct processes belonging to 21860
[2026-01-09 17:31:39] 2026-01-09 22:30:49,727 | INFO     | did not find any defunct processes belonging to 21860
[2026-01-09 17:31:39] 2026-01-09 22:30:49,727 | INFO     | ready for new job
[2026-01-09 17:31:39] 2026-01-09 22:30:49,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:31:39] 2026-01-09 22:30:49,730 | INFO     | ***************************************
[2026-01-09 17:31:39] 2026-01-09 22:30:49,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:31:39] 2026-01-09 22:30:49,730 | INFO     | ***************************************
[2026-01-09 17:31:39] 2026-01-09 22:30:49,730 | INFO     | 
[2026-01-09 17:31:39] 2026-01-09 22:30:49,731 | INFO     | architecture information:
[2026-01-09 17:31:39] 2026-01-09 22:30:49,732 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:31:39] 2026-01-09 22:30:49,751 | INFO     | cat /etc/os-release:
[2026-01-09 17:31:39] NAME="CentOS Linux"
[2026-01-09 17:31:39] VERSION="7 (Core)"
[2026-01-09 17:31:39] ID="centos"
[2026-01-09 17:31:39] ID_LIKE="rhel fedora"
[2026-01-09 17:31:39] VERSION_ID="7"
[2026-01-09 17:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:31:39] ANSI_COLOR="0;31"
[2026-01-09 17:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:31:39] HOME_URL="https://www.centos.org/"
[2026-01-09 17:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:31:39] 
[2026-01-09 17:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:31:39] 
[2026-01-09 17:31:39] 2026-01-09 22:30:49,751 | INFO     | ***************************************
[2026-01-09 17:31:39] 2026-01-09 22:30:50,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 17:31:39] 2026-01-09 22:30:50,275 | INFO     | sufficient remaining disk space (18495832064 B)
[2026-01-09 17:31:39] 2026-01-09 22:30:50,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:31:39] 2026-01-09 22:30:50,276 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:31:39] 2026-01-09 22:30:50,276 | INFO     | update_server=False
[2026-01-09 17:31:39] 2026-01-09 22:30:50,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:31:39] 2026-01-09 22:30:50,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:31:39] 2026-01-09 22:30:50,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:31:39] 2026-01-09 22:30:50,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:31:39] 2026-01-09 22:30:50,574 | INFO     | aborting loop
[2026-01-09 17:31:39] 2026-01-09 22:30:50,811 | INFO     | all job control threads have been joined
[2026-01-09 17:31:39] 2026-01-09 22:30:50,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:31:39] 2026-01-09 22:30:51,100 | INFO     | all data control threads have been joined
[2026-01-09 17:31:39] 2026-01-09 22:30:51,281 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,284 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,580 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,678 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,685 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,717 | INFO     | all payload control threads have been joined
[2026-01-09 17:31:39] 2026-01-09 22:30:51,817 | INFO     | [job] control thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:51,972 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,106 | INFO     | [data] control thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,267 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,283 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,388 | INFO     | [job] validate thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,389 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,722 | INFO     | [payload] control thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:52,774 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:30:54,990 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:31:01,323 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:31:39] 2026-01-09 22:31:02,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:31:39] 2026-01-09 22:31:19,991 | INFO     | PID=15481 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 17:31:39] 2026-01-09 22:31:19,992 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:31:39] 2026-01-09 22:31:19,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:31:39] 2026-01-09 22:31:19,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:31:39] 2026-01-09 22:31:33,212 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:31:39] 2026-01-09 22:31:34,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677052548928)>', '<ExcThread(monitor, started 140676461217536)>']
[2026-01-09 17:31:39] 2026-01-09 22:31:35,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:31:39] 2026-01-09 22:31:35,068 | INFO     | [monitor] control thread has ended
[2026-01-09 17:31:39] 2026-01-09 22:31:39,424 | INFO     | all workflow threads have been joined
[2026-01-09 17:31:39] 2026-01-09 22:31:39,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:31:39] 2026-01-09 22:31:39,424 | INFO     | traces error code: 0
[2026-01-09 17:31:39] 2026-01-09 22:31:39,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:31:39] 2026-01-09 22:31:39,553 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:31:39] 2026-01-09 22:31:39,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:31:39] 2026-01-09 22:31:39,563 [wrapper] pilotpid: 15481
[2026-01-09 17:31:39] 2026-01-09 22:31:39,568 [wrapper] Pilot exit status: 0
[2026-01-09 17:31:39] 2026-01-09 22:31:39,588 [wrapper] pandaids: 6963161804
[2026-01-09 17:31:39] 2026-01-09 22:31:39,640 [wrapper] cleanup supervisor_pilot 28667 15482
[2026-01-09 17:31:39] 2026-01-09 22:31:39,645 [wrapper] Test setup, not cleaning
[2026-01-09 17:31:39] 2026-01-09 22:31:39,650 [wrapper] apfmon messages muted
[2026-01-09 17:31:39] 2026-01-09 22:31:39,655 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:31:39] 2026-01-09 22:31:39,660 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:31:39]  *** Error codes and diagnostics ***
[2026-01-09 17:31:39]     "exeErrorCode": 0,
[2026-01-09 17:31:39]     "exeErrorDiag": "",
[2026-01-09 17:31:39]     "pilotErrorCode": 0,
[2026-01-09 17:31:39]     "pilotErrorDiag": "",
[2026-01-09 17:31:39]  *** Listing of results directory ***
[2026-01-09 17:31:39] total 443484
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 17:31:39] -rwx------ 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas       100 Jan  9 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:31:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 14:36 run_atlas
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas       105 Jan  9 14:36 job.xml
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas 225690748 Jan  9 14:36 EVNT.47898824._001227.pool.root.1
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:36 start_atlas.sh
[2026-01-09 17:31:39] drwxrwx--x 2 boincer umatlas      4096 Jan  9 14:36 shared
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 14:36 input.tar.gz
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas         0 Jan  9 14:36 boinc_lockfile
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 14:36 pandaJob.out
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas        57 Jan  9 14:37 setup.sh.local
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas    989364 Jan  9 14:37 agis_schedconf.cvmfs.json
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas   1516240 Jan  9 14:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:31:39] drwx------ 5 boincer umatlas      4096 Jan  9 14:37 pilot3
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 17:28 init_data.xml
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas 220813899 Jan  9 17:30 HITS.47898826._033461.pool.root.1
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas       531 Jan  9 17:30 boinc_task_state.xml
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas      1047 Jan  9 17:30 memory_monitor_summary.json
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas    406481 Jan  9 17:30 log.47898826._033461.job.log.tgz.1
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas        95 Jan  9 17:30 pilot_heartbeat.json
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas      7850 Jan  9 17:30 heartbeat.json
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 17:31 boinc_mmap_file
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas        28 Jan  9 17:31 wrapper_checkpoint.txt
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas      4818 Jan  9 17:31 pilotlog.txt
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas   1443532 Jan  9 17:31 log.47898826._033461.job.log.1
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas       357 Jan  9 17:31 output.list
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas       620 Jan  9 17:31 runtime_log
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas   1873920 Jan  9 17:31 result.tar.gz
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas       662 Jan  9 17:31 yJmLDmS1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEJgKDmnJhJHm.diag
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 17:31 runtime_log.err
[2026-01-09 17:31:39] -rw-r--r-- 1 boincer umatlas     21303 Jan  9 17:31 stderr.txt
[2026-01-09 17:31:39] HITS file was successfully produced:
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas 220813899 Jan  9 17:30 shared/HITS.pool.root.1
[2026-01-09 17:31:39]  *** Contents of shared directory: ***
[2026-01-09 17:31:39] total 438476
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas 225690748 Jan  9 14:36 ATLAS.root_0
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 14:36 start_atlas.sh
[2026-01-09 17:31:39] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 14:36 input.tar.gz
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas 220813899 Jan  9 17:30 HITS.pool.root.1
[2026-01-09 17:31:39] -rw------- 1 boincer umatlas   1873920 Jan  9 17:31 result.tar.gz
17:31:41 (11719): run_atlas exited; CPU time 77484.910294
17:31:41 (11719): called boinc_finish(0)

</stderr_txt>
]]>

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