Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:53 (3213005): wrapper (7.7.26015): starting
11:34:53 (3213005): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 11:34:53] Arguments: --nthreads 3
[2026-01-10 11:34:53] Threads: 3
[2026-01-10 11:34:53] Checking for CVMFS
[2026-01-10 11:34:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 11:34:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 11:34:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 11:47:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 11:47:46] 2.9.2.0 2245490 3995 85064 154976 0 57 35085905 36864001 0 130560 0 2544463 99.988 151112 2855 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 11:47:46] CVMFS is ok
[2026-01-10 11:47:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 11:47:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 11:47:46] Further information can be found at the LHC@home message board.
[2026-01-10 11:47:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 11:47:46] Checking for apptainer binary...
[2026-01-10 11:47:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 11:47:46] Running /usr/bin/apptainer --version
[2026-01-10 11:47:46] apptainer version 1.4.1-1.1
[2026-01-10 11:47:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 11:47:46] thA331a
[2026-01-10 11:47:46] apptainer works
[2026-01-10 11:47:46] Set ATHENA_PROC_NUMBER=3
[2026-01-10 11:47:46] Set ATHENA_CORE_NUMBER=3
[2026-01-10 11:47:46] Starting ATLAS job with PandaID=6963193591
[2026-01-10 11:47:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:44:10]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:44:10] 2026-01-10 12:43:41,421 | INFO     | all payload control threads have been joined
[2026-01-10 13:44:10] 2026-01-10 12:43:41,600 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:41,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:44:10] 2026-01-10 12:43:41,740 | INFO     | [job] control thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:41,741 | INFO     | [data] control thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:41,838 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:41,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:44:10] 2026-01-10 12:43:42,128 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,416 | INFO     | [job] validate thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,426 | INFO     | [payload] control thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,460 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,481 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:42,535 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:43,643 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:43:45,893 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:44:10] 2026-01-10 12:44:02,106 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:44:10] 2026-01-10 12:44:03,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663364609856)>', '<ExcThread(monitor, started 140662502573824)>']
[2026-01-10 13:44:10] 2026-01-10 12:44:08,873 | INFO     | all workflow threads have been joined
[2026-01-10 13:44:10] 2026-01-10 12:44:08,873 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:44:10] 2026-01-10 12:44:08,874 | INFO     | traces error code: 0
[2026-01-10 13:44:10] 2026-01-10 12:44:08,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:44:10] 2026-01-10 12:44:10,335 | INFO     | PID=3217208 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:44:10] 2026-01-10 12:44:10,335 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:44:10] 2026-01-10 12:44:10,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:44:10] 2026-01-10 12:44:10,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:44:10] 2026-01-10 12:44:10,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:44:10] 2026-01-10 12:44:10,336 | INFO     | [monitor] control thread has ended
[2026-01-10 13:44:10] 2026-01-10 12:44:10,381 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:44:10] 2026-01-10 12:44:10,384 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:44:10] 2026-01-10 12:44:10,386 [wrapper] pilotpid: 3217208
[2026-01-10 13:44:10] 2026-01-10 12:44:10,388 [wrapper] Pilot exit status: 0
[2026-01-10 13:44:10] 2026-01-10 12:44:10,396 [wrapper] pandaids: 6963193591
[2026-01-10 13:44:10] 2026-01-10 12:44:10,411 [wrapper] cleanup supervisor_pilot 3238307 3217209
[2026-01-10 13:44:10] 2026-01-10 12:44:10,413 [wrapper] Test setup, not cleaning
[2026-01-10 13:44:10] 2026-01-10 12:44:10,415 [wrapper] apfmon messages muted
[2026-01-10 13:44:10] 2026-01-10 12:44:10,418 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:44:10] 2026-01-10 12:44:10,420 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:44:10]  *** Error codes and diagnostics ***
[2026-01-10 13:44:10]     "exeErrorCode": 0,
[2026-01-10 13:44:10]     "exeErrorDiag": "",
[2026-01-10 13:44:10]     "pilotErrorCode": 0,
[2026-01-10 13:44:10]     "pilotErrorDiag": "",
[2026-01-10 13:44:10]  *** Listing of results directory ***
[2026-01-10 13:44:10] total 444724
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 13:44:10] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc       100 Jan 10 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:44:10] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 11:34 run_atlas
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc       105 Jan 10 11:34 job.xml
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc 223888093 Jan 10 11:34 EVNT.47898824._001501.pool.root.1
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc    592394 Jan 10 11:34 input.tar.gz
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:34 start_atlas.sh
[2026-01-10 13:44:10] drwxrwx--x 2 boinc boinc      4096 Jan 10 11:34 shared
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc         0 Jan 10 11:34 boinc_setup_complete
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      6441 Jan 10 11:34 init_data.xml
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc         0 Jan 10 11:34 boinc_lockfile
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      2520 Jan 10 11:47 pandaJob.out
[2026-01-10 13:44:10] -rw------- 1 boinc boinc    989548 Jan 10 11:47 agis_schedconf.cvmfs.json
[2026-01-10 13:44:10] -rw------- 1 boinc boinc   1516240 Jan 10 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:44:10] drwx------ 5 boinc boinc      4096 Jan 10 11:47 pilot3
[2026-01-10 13:44:10] -rw------- 1 boinc boinc 225030869 Jan 10 13:43 HITS.47898826._039064.pool.root.1
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc       529 Jan 10 13:43 boinc_task_state.xml
[2026-01-10 13:44:10] -rw------- 1 boinc boinc      1015 Jan 10 13:43 memory_monitor_summary.json
[2026-01-10 13:44:10] -rw------- 1 boinc boinc        95 Jan 10 13:43 pilot_heartbeat.json
[2026-01-10 13:44:10] -rw------- 1 boinc boinc    285438 Jan 10 13:43 log.47898826._039064.job.log.tgz.1
[2026-01-10 13:44:10] -rw------- 1 boinc boinc      7755 Jan 10 13:43 heartbeat.json
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      8192 Jan 10 13:43 boinc_mmap_file
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc        27 Jan 10 13:43 wrapper_checkpoint.txt
[2026-01-10 13:44:10] -rw------- 1 boinc boinc       747 Jan 10 13:44 pilotlog.txt
[2026-01-10 13:44:10] -rw------- 1 boinc boinc   1003756 Jan 10 13:44 log.47898826._039064.job.log.1
[2026-01-10 13:44:10] -rw------- 1 boinc boinc       357 Jan 10 13:44 output.list
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc       620 Jan 10 13:44 runtime_log
[2026-01-10 13:44:10] -rw------- 1 boinc boinc   1310720 Jan 10 13:44 result.tar.gz
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      8902 Jan 10 13:44 runtime_log.err
[2026-01-10 13:44:10] -rw------- 1 boinc boinc       660 Jan 10 13:44 2ELMDm4CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmj0gKDmXx9Usm.diag
[2026-01-10 13:44:10] -rw-r--r-- 1 boinc boinc      6376 Jan 10 13:44 stderr.txt
[2026-01-10 13:44:10] HITS file was successfully produced:
[2026-01-10 13:44:10] -rw------- 1 boinc boinc 225030869 Jan 10 13:43 shared/HITS.pool.root.1
[2026-01-10 13:44:10]  *** Contents of shared directory: ***
[2026-01-10 13:44:10] total 440288
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc 223888093 Jan 10 11:34 ATLAS.root_0
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc    592394 Jan 10 11:34 input.tar.gz
[2026-01-10 13:44:10] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:34 start_atlas.sh
[2026-01-10 13:44:10] -rw------- 1 boinc boinc 225030869 Jan 10 13:43 HITS.pool.root.1
[2026-01-10 13:44:10] -rw------- 1 boinc boinc   1310720 Jan 10 13:44 result.tar.gz
13:44:11 (3213005): run_atlas exited; CPU time 20068.111394
13:44:11 (3213005): called boinc_finish(0)

</stderr_txt>
]]>

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