Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:28 (3185856): wrapper (7.7.26015): starting
09:42:28 (3185856): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 09:42:28] Arguments: --nthreads 3
[2026-01-10 09:42:28] Threads: 3
[2026-01-10 09:42:28] Checking for CVMFS
[2026-01-10 09:42:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:42:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:42:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:42:28] 2.9.2.0 2245490 3883 86056 154973 1 56 35073519 36864001 0 130560 0 2472905 99.988 146925 4919 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 09:42:28] CVMFS is ok
[2026-01-10 09:42:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:42:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:42:28] Further information can be found at the LHC@home message board.
[2026-01-10 09:42:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:42:28] Checking for apptainer binary...
[2026-01-10 09:42:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:42:28] Running /usr/bin/apptainer --version
[2026-01-10 09:42:28] apptainer version 1.4.1-1.1
[2026-01-10 09:42:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:42:28] thA331a
[2026-01-10 09:42:28] apptainer works
[2026-01-10 09:42:28] Set ATHENA_PROC_NUMBER=3
[2026-01-10 09:42:28] Set ATHENA_CORE_NUMBER=3
[2026-01-10 09:42:28] Starting ATLAS job with PandaID=6963809641
[2026-01-10 09:42:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:34:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:34:48] 2026-01-10 10:34:10,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:34:48] 2026-01-10 10:34:10,572 | INFO     | ***************************************
[2026-01-10 11:34:48] 2026-01-10 10:34:10,572 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:34:48] 2026-01-10 10:34:10,572 | INFO     | ***************************************
[2026-01-10 11:34:48] 2026-01-10 10:34:10,572 | INFO     | 
[2026-01-10 11:34:48] 2026-01-10 10:34:10,573 | INFO     | architecture information:
[2026-01-10 11:34:48] 2026-01-10 10:34:10,573 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:34:48] 2026-01-10 10:34:10,581 | INFO     | cat /etc/os-release:
[2026-01-10 11:34:48] NAME="CentOS Linux"
[2026-01-10 11:34:48] VERSION="7 (Core)"
[2026-01-10 11:34:48] ID="centos"
[2026-01-10 11:34:48] ID_LIKE="rhel fedora"
[2026-01-10 11:34:48] VERSION_ID="7"
[2026-01-10 11:34:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:34:48] ANSI_COLOR="0;31"
[2026-01-10 11:34:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:34:48] HOME_URL="https://www.centos.org/"
[2026-01-10 11:34:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:34:48] 
[2026-01-10 11:34:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:34:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:34:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:34:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:34:48] 
[2026-01-10 11:34:48] 2026-01-10 10:34:10,582 | INFO     | ***************************************
[2026-01-10 11:34:48] 2026-01-10 10:34:11,083 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | INFO     | sufficient remaining disk space (325309169664 B)
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | INFO     | update_server=False
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:34:48] 2026-01-10 10:34:11,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:34:48] 2026-01-10 10:34:11,310 | INFO     | all data control threads have been joined
[2026-01-10 11:34:48] 2026-01-10 10:34:12,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:34:48] 2026-01-10 10:34:12,067 | INFO     | aborting loop
[2026-01-10 11:34:48] 2026-01-10 10:34:12,102 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,102 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,108 | INFO     | [job] validate thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,128 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,169 | INFO     | all payload control threads have been joined
[2026-01-10 11:34:48] 2026-01-10 10:34:12,183 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,302 | INFO     | all job control threads have been joined
[2026-01-10 11:34:48] 2026-01-10 10:34:12,315 | INFO     | [data] control thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:12,363 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,007 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,072 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,099 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,103 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,175 | INFO     | [payload] control thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,308 | INFO     | [job] control thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:13,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:34:48] 2026-01-10 10:34:17,339 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:21,941 | INFO     | job.realtimelogging is not enabled
[2026-01-10 11:34:48] 2026-01-10 10:34:22,947 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:34:48] 2026-01-10 10:34:42,050 | INFO     | PID=3189576 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:34:48] 2026-01-10 10:34:42,050 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:34:48] 2026-01-10 10:34:42,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:34:48] 2026-01-10 10:34:42,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:34:48] 2026-01-10 10:34:42,401 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:34:48] 2026-01-10 10:34:43,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809761933120)>', '<ExcThread(monitor, started 139809272084224)>']
[2026-01-10 11:34:48] 2026-01-10 10:34:44,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:34:48] 2026-01-10 10:34:44,062 | INFO     | [monitor] control thread has ended
[2026-01-10 11:34:48] 2026-01-10 10:34:48,433 | INFO     | all workflow threads have been joined
[2026-01-10 11:34:48] 2026-01-10 10:34:48,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:34:48] 2026-01-10 10:34:48,433 | INFO     | traces error code: 0
[2026-01-10 11:34:48] 2026-01-10 10:34:48,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:34:48] 2026-01-10 10:34:48,484 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:34:48] 2026-01-10 10:34:48,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:34:48] 2026-01-10 10:34:48,488 [wrapper] pilotpid: 3189576
[2026-01-10 11:34:48] 2026-01-10 10:34:48,491 [wrapper] Pilot exit status: 0
[2026-01-10 11:34:48] 2026-01-10 10:34:48,498 [wrapper] pandaids: 6963809641
[2026-01-10 11:34:48] 2026-01-10 10:34:48,513 [wrapper] cleanup supervisor_pilot 3210355 3189577
[2026-01-10 11:34:48] 2026-01-10 10:34:48,516 [wrapper] Test setup, not cleaning
[2026-01-10 11:34:48] 2026-01-10 10:34:48,518 [wrapper] apfmon messages muted
[2026-01-10 11:34:48] 2026-01-10 10:34:48,520 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:34:48] 2026-01-10 10:34:48,522 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:34:48]  *** Error codes and diagnostics ***
[2026-01-10 11:34:48]     "exeErrorCode": 0,
[2026-01-10 11:34:48]     "exeErrorDiag": "",
[2026-01-10 11:34:48]     "pilotErrorCode": 0,
[2026-01-10 11:34:48]     "pilotErrorDiag": "",
[2026-01-10 11:34:48]  *** Listing of results directory ***
[2026-01-10 11:34:48] total 438884
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 11:34:48] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc       100 Jan 10 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:34:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 09:42 run_atlas
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc       105 Jan 10 09:42 job.xml
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc 226026214 Jan 10 09:42 EVNT.47898824._000920.pool.root.1
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc    592408 Jan 10 09:42 input.tar.gz
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:42 start_atlas.sh
[2026-01-10 11:34:48] drwxrwx--x 2 boinc boinc      4096 Jan 10 09:42 shared
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:42 boinc_setup_complete
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      6441 Jan 10 09:42 init_data.xml
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc         0 Jan 10 09:42 boinc_lockfile
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      2519 Jan 10 09:42 pandaJob.out
[2026-01-10 11:34:48] -rw------- 1 boinc boinc    989548 Jan 10 09:42 agis_schedconf.cvmfs.json
[2026-01-10 11:34:48] -rw------- 1 boinc boinc   1516240 Jan 10 09:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:34:48] drwx------ 5 boinc boinc      4096 Jan 10 09:42 pilot3
[2026-01-10 11:34:48] -rw------- 1 boinc boinc 216984350 Jan 10 11:33 HITS.47898826._039831.pool.root.1
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc       529 Jan 10 11:33 boinc_task_state.xml
[2026-01-10 11:34:48] -rw------- 1 boinc boinc      1015 Jan 10 11:33 memory_monitor_summary.json
[2026-01-10 11:34:48] -rw------- 1 boinc boinc    283880 Jan 10 11:34 log.47898826._039831.job.log.tgz.1
[2026-01-10 11:34:48] -rw------- 1 boinc boinc        95 Jan 10 11:34 pilot_heartbeat.json
[2026-01-10 11:34:48] -rw------- 1 boinc boinc      7755 Jan 10 11:34 heartbeat.json
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc        27 Jan 10 11:34 wrapper_checkpoint.txt
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:34 boinc_mmap_file
[2026-01-10 11:34:48] -rw------- 1 boinc boinc      4824 Jan 10 11:34 pilotlog.txt
[2026-01-10 11:34:48] -rw------- 1 boinc boinc    967215 Jan 10 11:34 log.47898826._039831.job.log.1
[2026-01-10 11:34:48] -rw------- 1 boinc boinc       357 Jan 10 11:34 output.list
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:34 runtime_log
[2026-01-10 11:34:48] -rw------- 1 boinc boinc   1269760 Jan 10 11:34 result.tar.gz
[2026-01-10 11:34:48] -rw------- 1 boinc boinc       660 Jan 10 11:34 vsJNDmUDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmG4gKDmIWZGOm.diag
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      8902 Jan 10 11:34 runtime_log.err
[2026-01-10 11:34:48] -rw-r--r-- 1 boinc boinc      9544 Jan 10 11:34 stderr.txt
[2026-01-10 11:34:48] HITS file was successfully produced:
[2026-01-10 11:34:48] -rw------- 1 boinc boinc 216984350 Jan 10 11:33 shared/HITS.pool.root.1
[2026-01-10 11:34:48]  *** Contents of shared directory: ***
[2026-01-10 11:34:48] total 434476
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc 226026214 Jan 10 09:42 ATLAS.root_0
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc    592408 Jan 10 09:42 input.tar.gz
[2026-01-10 11:34:48] -rw-r--r-- 2 boinc boinc     15847 Jan 10 09:42 start_atlas.sh
[2026-01-10 11:34:48] -rw------- 1 boinc boinc 216984350 Jan 10 11:33 HITS.pool.root.1
[2026-01-10 11:34:48] -rw------- 1 boinc boinc   1269760 Jan 10 11:34 result.tar.gz
11:34:50 (3185856): run_atlas exited; CPU time 19352.799142
11:34:50 (3185856): called boinc_finish(0)

</stderr_txt>
]]>

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