Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:13:33 (3864567): wrapper (7.7.26015): starting
15:13:33 (3864567): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:13:33] Arguments: --nthreads 8
[2026-01-09 15:13:33] Threads: 8
[2026-01-09 15:13:33] Checking for CVMFS
[2026-01-09 15:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:13:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:13:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:13:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:13:36] 2.13.3.0 12497 93740 243740 154955 1 724 31243085 32935937 23359 16776704 0 491197003 99.478 679576296 37882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 15:13:36] CVMFS is ok
[2026-01-09 15:13:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:13:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:13:36] Further information can be found at the LHC@home message board.
[2026-01-09 15:13:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:13:36] Checking for apptainer binary...
[2026-01-09 15:13:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:13:36] Running /usr/bin/apptainer --version
[2026-01-09 15:13:36] apptainer version 1.4.5-2.el9
[2026-01-09 15:13:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:13:36] c7-7-35.aglt2.org
[2026-01-09 15:13:36] apptainer works
[2026-01-09 15:13:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:13:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:13:36] Starting ATLAS job with PandaID=6963364261
[2026-01-09 15:13:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:00:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:00:23] 2026-01-09 22:59:27,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:00:23] 2026-01-09 22:59:29,040 | INFO     | time since job start (9931s) is within the limit (349056.0s)
[2026-01-09 18:00:23] 2026-01-09 22:59:30,354 | INFO     | monitor loop #659: job 0:6963364261 is in state 'finished'
[2026-01-09 18:00:23] 2026-01-09 22:59:30,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:00:23] 2026-01-09 22:59:31,016 | INFO     | PID=3868497 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 18:00:23] 2026-01-09 22:59:31,016 | INFO     | .. there are 24 such processes running
[2026-01-09 18:00:23] 2026-01-09 22:59:32,017 | INFO     | time since job start (9934s) is within the limit (349056.0s)
[2026-01-09 18:00:23] 2026-01-09 22:59:32,891 | INFO     | monitor loop #660: job 0:6963364261 is in state 'finished'
[2026-01-09 18:00:23] 2026-01-09 22:59:32,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:00:23] 2026-01-09 22:59:32,980 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:00:23] 2026-01-09 22:59:32,985 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3184.930854166667
[2026-01-09 18:00:23] 2026-01-09 22:59:33,002 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963364261/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,003 | INFO     | extracted standard info from prmon json
[2026-01-09 18:00:23] 2026-01-09 22:59:33,003 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:00:23] 2026-01-09 22:59:33,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:00:23] 2026-01-09 22:59:33,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:00:23] 2026-01-09 22:59:33,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:00:23] 2026-01-09 22:59:33,006 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:00:23] 2026-01-09 22:59:33,007 | INFO     | sum of square deviations: 1318279268.4444466
[2026-01-09 18:00:23] 2026-01-09 22:59:33,007 | INFO     | sum of deviations: -31314614098.1111
[2026-01-09 18:00:23] 2026-01-09 22:59:33,008 | INFO     | mean x: 1767994595.5185184
[2026-01-09 18:00:23] 2026-01-09 22:59:33,008 | INFO     | mean y: 2589493.3703703703
[2026-01-09 18:00:23] 2026-01-09 22:59:33,008 | INFO     | intersect: 41999812548.7988
[2026-01-09 18:00:23] 2026-01-09 22:59:33,008 | INFO     | chi2: 3.229447780034934
[2026-01-09 18:00:23] 2026-01-09 22:59:33,008 | INFO     | sum of square deviations: 1199943080.942676
[2026-01-09 18:00:23] 2026-01-09 22:59:33,009 | INFO     | sum of deviations: -19061807954.0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,009 | INFO     | mean x: 1767994443.0191083
[2026-01-09 18:00:23] 2026-01-09 22:59:33,009 | INFO     | mean y: 2604957.0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,009 | INFO     | intersect: 28088245910.98073
[2026-01-09 18:00:23] 2026-01-09 22:59:33,010 | INFO     | chi2: 2.564441461278097
[2026-01-09 18:00:23] 2026-01-09 22:59:33,010 | INFO     | current chi2=2.564441461278097 (change=20.591951443464534 %)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,010 | INFO     | right removable region: 156
[2026-01-09 18:00:23] 2026-01-09 22:59:33,010 | INFO     | sum of square deviations: 1199941250.942676
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | sum of deviations: -66526638716.80895
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | mean x: 1767994748.0191083
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | mean y: 2634515.9363057325
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | intersect: 98023056567.66708
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | chi2: 1.1007254333089853
[2026-01-09 18:00:23] 2026-01-09 22:59:33,011 | INFO     | current chi2=1.1007254333089853 (change=65.91598600497952 %)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,012 | INFO     | sum of square deviations: 1088905695.9407918
[2026-01-09 18:00:23] 2026-01-09 22:59:33,012 | INFO     | sum of deviations: -70237300790.1974
[2026-01-09 18:00:23] 2026-01-09 22:59:33,012 | INFO     | mean x: 1767994900.5197368
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | mean y: 2639473.0657894737
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | intersect: 114042992174.1798
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | chi2: 0.966142694226406
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | current chi2=0.966142694226406 (change=12.226731118404215 %)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | left removable region: 20
[2026-01-09 18:00:23] 2026-01-09 22:59:33,013 | INFO     | sum of square deviations: 779957775.9338263
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | sum of deviations: -46953556696.169106
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | mean x: 1767995022.5220587
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | mean y: 2642027.8897058824
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | intersect: 106436165854.41203
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | chi2: 0.25182290487397063
[2026-01-09 18:00:23] 2026-01-09 22:59:33,014 | INFO     | current memory leak: -60.20 B/s (using 136 data points, chi2=0.25)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | could have reported an average CPU frequency of 3142 MHz (9 samples)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | ..............................
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | . Timing measurements:
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | . get job = 0 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | . initial setup = 2 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | . payload setup = 16 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,015 | INFO     | . stage-in = 0 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,016 | INFO     | . payload execution = 9880 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,016 | INFO     | . stage-out = 0 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,016 | INFO     | . log creation = 0 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,016 | INFO     | ..............................
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | 
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | job summary report
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | --------------------------------------------------
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | PanDA job id: 6963364261
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | task id: 47898826
[2026-01-09 18:00:23] 2026-01-09 22:59:33,107 | INFO     | errors: (none)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | pilot state: finished 
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | transexitcode: 0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | exeerrorcode: 0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | exeerrordiag: 
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | exitcode: 0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | exitmsg: OK
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | cpuconsumptiontime: 46095 s
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | nevents: 400
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | neventsw: 0
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | pid: 3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | pgrp: 3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | corecount: 8
[2026-01-09 18:00:23] 2026-01-09 22:59:33,108 | INFO     | event service: False
[2026-01-09 18:00:23] 2026-01-09 22:59:33,109 | INFO     | sizes: {0: 2283919, 8: 2284181, 11: 2284209, 9901: 2312792, 9903: 2321790, 9904: 2321846, 9913: 2322232}
[2026-01-09 18:00:23] 2026-01-09 22:59:33,109 | INFO     | --------------------------------------------------
[2026-01-09 18:00:23] 2026-01-09 22:59:33,109 | INFO     | 
[2026-01-09 18:00:23] 2026-01-09 22:59:33,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 18:00:23] 2026-01-09 22:59:33,223 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | job 6963364261 has completed (purged errors)
[2026-01-09 18:00:23] 2026-01-09 22:59:33,225 | INFO     | overall cleanup function is called
[2026-01-09 18:00:23] 2026-01-09 22:59:34,243 | INFO     | --- collectZombieJob: --- 10, [3877230]
[2026-01-09 18:00:23] 2026-01-09 22:59:34,243 | INFO     | zombie collector waiting for pid 3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:34,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:00:23] 2026-01-09 22:59:34,243 | INFO     | collected zombie processes
[2026-01-09 18:00:23] 2026-01-09 22:59:34,243 | INFO     | will attempt to kill all subprocesses of pid=3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:35,232 | INFO     | process IDs to be killed: [3877230] (in reverse order)
[2026-01-09 18:00:23] 2026-01-09 22:59:35,371 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:00:23] 2026-01-09 22:59:35,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:00:23] 2026-01-09 22:59:35,392 | INFO     | did not find any defunct processes belonging to 3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:35,410 | INFO     | did not find any defunct processes belonging to 3877230
[2026-01-09 18:00:23] 2026-01-09 22:59:35,410 | INFO     | ready for new job
[2026-01-09 18:00:23] 2026-01-09 22:59:35,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:00:23] 2026-01-09 22:59:35,413 | INFO     | ***************************************
[2026-01-09 18:00:23] 2026-01-09 22:59:35,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:00:23] 2026-01-09 22:59:35,413 | INFO     | ***************************************
[2026-01-09 18:00:23] 2026-01-09 22:59:35,413 | INFO     | 
[2026-01-09 18:00:23] 2026-01-09 22:59:35,432 | INFO     | architecture information:
[2026-01-09 18:00:23] 2026-01-09 22:59:35,434 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:00:23] 2026-01-09 22:59:35,491 | INFO     | cat /etc/os-release:
[2026-01-09 18:00:23] NAME="CentOS Linux"
[2026-01-09 18:00:23] VERSION="7 (Core)"
[2026-01-09 18:00:23] ID="centos"
[2026-01-09 18:00:23] ID_LIKE="rhel fedora"
[2026-01-09 18:00:23] VERSION_ID="7"
[2026-01-09 18:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:00:23] ANSI_COLOR="0;31"
[2026-01-09 18:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:00:23] HOME_URL="https://www.centos.org/"
[2026-01-09 18:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:00:23] 
[2026-01-09 18:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:00:23] 
[2026-01-09 18:00:23] 2026-01-09 22:59:35,491 | INFO     | ***************************************
[2026-01-09 18:00:23] 2026-01-09 22:59:35,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 18:00:23] 2026-01-09 22:59:36,141 | INFO     | sufficient remaining disk space (73028075520 B)
[2026-01-09 18:00:23] 2026-01-09 22:59:36,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:00:23] 2026-01-09 22:59:36,142 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:00:23] 2026-01-09 22:59:36,142 | INFO     | update_server=False
[2026-01-09 18:00:23] 2026-01-09 22:59:36,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:00:23] 2026-01-09 22:59:36,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:00:23] 2026-01-09 22:59:36,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:23] 2026-01-09 22:59:36,405 | INFO     | aborting loop
[2026-01-09 18:00:23] 2026-01-09 22:59:36,492 | INFO     | all payload control threads have been joined
[2026-01-09 18:00:23] 2026-01-09 22:59:36,891 | INFO     | all data control threads have been joined
[2026-01-09 18:00:23] 2026-01-09 22:59:37,088 | INFO     | all job control threads have been joined
[2026-01-09 18:00:23] 2026-01-09 22:59:37,148 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,415 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,498 | INFO     | [payload] control thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,632 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:37,897 | INFO     | [data] control thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,012 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,072 | INFO     | [job] validate thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,106 | INFO     | [job] control thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:23] 2026-01-09 22:59:38,166 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,216 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,350 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,642 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:38,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:00:23] 2026-01-09 22:59:39,138 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:00:23] 2026-01-09 22:59:42,667 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:00:23] 2026-01-09 23:00:06,572 | INFO     | PID=3868497 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:00:23] 2026-01-09 23:00:06,572 | INFO     | .. there are 24 such processes running
[2026-01-09 18:00:23] 2026-01-09 23:00:06,573 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:00:23] 2026-01-09 23:00:06,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:00:23] 2026-01-09 23:00:06,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:00:23] 2026-01-09 23:00:14,884 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:00:23] 2026-01-09 23:00:16,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499336656704)>', '<ExcThread(monitor, started 140499063117568)>']
[2026-01-09 18:00:23] 2026-01-09 23:00:16,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:00:23] 2026-01-09 23:00:16,633 | INFO     | [monitor] control thread has ended
[2026-01-09 18:00:23] 2026-01-09 23:00:21,528 | INFO     | all workflow threads have been joined
[2026-01-09 18:00:23] 2026-01-09 23:00:21,528 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:00:23] 2026-01-09 23:00:21,528 | INFO     | traces error code: 0
[2026-01-09 18:00:23] 2026-01-09 23:00:21,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:00:23] 2026-01-09 23:00:21,971 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:00:23] 2026-01-09 23:00:21,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:00:23] 2026-01-09 23:00:22,037 [wrapper] pilotpid: 3868497
[2026-01-09 18:00:23] 2026-01-09 23:00:22,117 [wrapper] Pilot exit status: 0
[2026-01-09 18:00:23] 2026-01-09 23:00:22,385 [wrapper] pandaids: 6963364261
[2026-01-09 18:00:23] 2026-01-09 23:00:22,739 [wrapper] cleanup supervisor_pilot  234674 3868498
[2026-01-09 18:00:23] 2026-01-09 23:00:22,742 [wrapper] Test setup, not cleaning
[2026-01-09 18:00:23] 2026-01-09 23:00:22,744 [wrapper] apfmon messages muted
[2026-01-09 18:00:23] 2026-01-09 23:00:22,746 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:00:23] 2026-01-09 23:00:22,749 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:00:23]  *** Error codes and diagnostics ***
[2026-01-09 18:00:23]     "exeErrorCode": 0,
[2026-01-09 18:00:23]     "exeErrorDiag": "",
[2026-01-09 18:00:23]     "pilotErrorCode": 0,
[2026-01-09 18:00:23]     "pilotErrorDiag": "",
[2026-01-09 18:00:23]  *** Listing of results directory ***
[2026-01-09 18:00:23] total 443864
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:00:23] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas       100 Jan  9 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:00:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 15:13 run_atlas
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas       105 Jan  9 15:13 job.xml
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas 224522243 Jan  9 15:13 EVNT.47898824._000669.pool.root.1
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:13 start_atlas.sh
[2026-01-09 18:00:23] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 15:13 shared
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:13 input.tar.gz
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas         0 Jan  9 15:13 boinc_lockfile
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 15:13 pandaJob.out
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas        57 Jan  9 15:13 setup.sh.local
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas    989364 Jan  9 15:13 agis_schedconf.cvmfs.json
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:13 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:00:23] drwx------. 5 boincer umatlas      4096 Jan  9 15:13 pilot3
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 17:57 init_data.xml
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas 222593350 Jan  9 17:58 HITS.47898826._039524.pool.root.1
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas       529 Jan  9 17:58 boinc_task_state.xml
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas      1033 Jan  9 17:59 memory_monitor_summary.json
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas    401046 Jan  9 17:59 log.47898826._039524.job.log.tgz.1
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas      7778 Jan  9 17:59 heartbeat.json
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas        95 Jan  9 18:00 pilot_heartbeat.json
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas      4824 Jan  9 18:00 pilotlog.txt
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:00 boinc_mmap_file
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas        27 Jan  9 18:00 wrapper_checkpoint.txt
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas   1339055 Jan  9 18:00 log.47898826._039524.job.log.1
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas       357 Jan  9 18:00 output.list
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:00 runtime_log
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas   1761280 Jan  9 18:00 result.tar.gz
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 18:00 runtime_log.err
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas       654 Jan  9 18:00 h6yLDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO2gKDmKZvGPm.diag
[2026-01-09 18:00:23] -rw-r--r--. 1 boincer umatlas     21460 Jan  9 18:00 stderr.txt
[2026-01-09 18:00:23] HITS file was successfully produced:
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas 222593350 Jan  9 17:58 shared/HITS.pool.root.1
[2026-01-09 18:00:23]  *** Contents of shared directory: ***
[2026-01-09 18:00:23] total 438968
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas 224522243 Jan  9 15:13 ATLAS.root_0
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 15:13 start_atlas.sh
[2026-01-09 18:00:23] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 15:13 input.tar.gz
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas 222593350 Jan  9 17:58 HITS.pool.root.1
[2026-01-09 18:00:23] -rw-------. 1 boincer umatlas   1761280 Jan  9 18:00 result.tar.gz
18:00:24 (3864567): run_atlas exited; CPU time 46469.278953
18:00:24 (3864567): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN