Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:39 (2197685): wrapper (7.7.26015): starting
16:33:39 (2197685): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 16:33:39] Arguments: --nthreads 9
[2026-01-09 16:33:39] Threads: 9
[2026-01-09 16:33:39] Checking for CVMFS
[2026-01-09 16:33:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:33:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:33:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:33:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:33:41] 2.13.3.0 11754 93910 225976 154957 3 436 31876458 32935936 18779 16776704 0 488131646 99.518 638708507 17688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 16:33:41] CVMFS is ok
[2026-01-09 16:33:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:33:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:33:41] Further information can be found at the LHC@home message board.
[2026-01-09 16:33:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:33:41] Checking for apptainer binary...
[2026-01-09 16:33:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:33:41] Running /usr/bin/apptainer --version
[2026-01-09 16:33:41] apptainer version 1.4.5-2.el9
[2026-01-09 16:33:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:33:42] c7-2-38.aglt2.org
[2026-01-09 16:33:42] apptainer works
[2026-01-09 16:33:42] Set ATHENA_PROC_NUMBER=9
[2026-01-09 16:33:42] Set ATHENA_CORE_NUMBER=9
[2026-01-09 16:33:42] Starting ATLAS job with PandaID=6963193698
[2026-01-09 16:33:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:38:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:38:55] 2026-01-09 23:38:16,569 | INFO     | executing command: lscpu
[2026-01-09 18:38:55] 2026-01-09 23:38:16,634 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 18:38:55] 2026-01-09 23:38:17,389 | INFO     | time since job start (7436s) is within the limit (349056.0s)
[2026-01-09 18:38:55] 2026-01-09 23:38:18,612 | INFO     | monitor loop #511: job 0:6963193698 is in state 'finished'
[2026-01-09 18:38:55] 2026-01-09 23:38:18,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:38:55] 2026-01-09 23:38:19,399 | INFO     | time since job start (7438s) is within the limit (349056.0s)
[2026-01-09 18:38:55] 2026-01-09 23:38:21,116 | INFO     | monitor loop #512: job 0:6963193698 is in state 'finished'
[2026-01-09 18:38:55] 2026-01-09 23:38:21,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:38:55] 2026-01-09 23:38:21,405 | INFO     | time since job start (7440s) is within the limit (349056.0s)
[2026-01-09 18:38:55] 2026-01-09 23:38:21,977 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:38:55] 2026-01-09 23:38:21,987 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3322.1375416666674
[2026-01-09 18:38:55] 2026-01-09 23:38:21,999 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963193698/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,000 | INFO     | extracted standard info from prmon json
[2026-01-09 18:38:55] 2026-01-09 23:38:22,000 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:38:55] 2026-01-09 23:38:22,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:38:55] 2026-01-09 23:38:22,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:38:55] 2026-01-09 23:38:22,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:38:55] 2026-01-09 23:38:22,002 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:38:55] 2026-01-09 23:38:22,002 | INFO     | sum of square deviations: 549288042.9917359
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | sum of deviations: 1021786118.7851229
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | mean x: 1767998211.0082645
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | mean y: 2575595.214876033
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | intersect: -3286256290.157794
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | chi2: 3.994343496802078
[2026-01-09 18:38:55] 2026-01-09 23:38:22,003 | INFO     | sum of square deviations: 483966192.9913803
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | sum of deviations: 9361788916.939667
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | mean x: 1767998058.5086207
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | mean y: 2594453.5603448274
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | intersect: -34197365934.19271
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | chi2: 3.332249416729043
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | current chi2=3.332249416729043 (change=16.57579225730376 %)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | right removable region: 115
[2026-01-09 18:38:55] 2026-01-09 23:38:22,004 | INFO     | sum of square deviations: 483965582.9913803
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | sum of deviations: -31462312009.732765
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | mean x: 1767998363.5086207
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | mean y: 2650889.2327586208
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | intersect: 114939163113.06969
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | chi2: 1.0442036539108064
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | current chi2=1.0442036539108064 (change=73.85794049142721 %)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,005 | INFO     | sum of square deviations: 424038572.9909904
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | sum of deviations: -34640940491.89189
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | mean x: 1767998516.0090091
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | mean y: 2658705.891891892
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | intersect: 144435583641.99802
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | chi2: 0.9097221832353255
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | current chi2=0.9097221832353255 (change=12.878854634516342 %)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | left removable region: 20
[2026-01-09 18:38:55] 2026-01-09 23:38:22,006 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | sum of deviations: -17575535757.000004
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | mean x: 1767998638.0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | mean y: 2659082.168421053
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | intersect: 116895895408.36275
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | chi2: 0.1644736578219853
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | current memory leak: -66.12 B/s (using 95 data points, chi2=0.16)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | could have reported an average CPU frequency of 3310 MHz (8 samples)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | ..............................
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | . Timing measurements:
[2026-01-09 18:38:55] 2026-01-09 23:38:22,007 | INFO     | . get job = 0 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . initial setup = 5 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . payload setup = 36 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . stage-in = 0 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . payload execution = 7354 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . stage-out = 0 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | . log creation = 0 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,008 | INFO     | ..............................
[2026-01-09 18:38:55] 2026-01-09 23:38:22,089 | INFO     | 
[2026-01-09 18:38:55] 2026-01-09 23:38:22,089 | INFO     | job summary report
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | --------------------------------------------------
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | PanDA job id: 6963193698
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | task id: 47898826
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | errors: (none)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | pilot state: finished 
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | transexitcode: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | exeerrorcode: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | exeerrordiag: 
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | exitcode: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | exitmsg: OK
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | cpuconsumptiontime: 44171 s
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | nevents: 400
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | neventsw: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | pid: 2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:22,090 | INFO     | pgrp: 2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | corecount: 9
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | event service: False
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 19: 2284345, 24: 2284373, 7395: 2312067, 7396: 2321065, 7399: 2321121, 7406: 2321315}
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | --------------------------------------------------
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | 
[2026-01-09 18:38:55] 2026-01-09 23:38:22,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 18:38:55] 2026-01-09 23:38:22,106 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | job 6963193698 has completed (purged errors)
[2026-01-09 18:38:55] 2026-01-09 23:38:22,108 | INFO     | overall cleanup function is called
[2026-01-09 18:38:55] 2026-01-09 23:38:23,117 | INFO     | --- collectZombieJob: --- 10, [2214058]
[2026-01-09 18:38:55] 2026-01-09 23:38:23,117 | INFO     | zombie collector waiting for pid 2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:23,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:38:55] 2026-01-09 23:38:23,117 | INFO     | collected zombie processes
[2026-01-09 18:38:55] 2026-01-09 23:38:23,117 | INFO     | will attempt to kill all subprocesses of pid=2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:23,557 | INFO     | process IDs to be killed: [2214058] (in reverse order)
[2026-01-09 18:38:55] 2026-01-09 23:38:23,734 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:38:55] 2026-01-09 23:38:23,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:38:55] 2026-01-09 23:38:23,754 | INFO     | did not find any defunct processes belonging to 2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:23,772 | INFO     | did not find any defunct processes belonging to 2214058
[2026-01-09 18:38:55] 2026-01-09 23:38:23,773 | INFO     | ready for new job
[2026-01-09 18:38:55] 2026-01-09 23:38:23,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:38:55] 2026-01-09 23:38:23,774 | INFO     | ***************************************
[2026-01-09 18:38:55] 2026-01-09 23:38:23,774 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:38:55] 2026-01-09 23:38:23,774 | INFO     | ***************************************
[2026-01-09 18:38:55] 2026-01-09 23:38:23,774 | INFO     | 
[2026-01-09 18:38:55] 2026-01-09 23:38:23,779 | INFO     | architecture information:
[2026-01-09 18:38:55] 2026-01-09 23:38:23,779 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:38:55] 2026-01-09 23:38:23,793 | INFO     | cat /etc/os-release:
[2026-01-09 18:38:55] NAME="CentOS Linux"
[2026-01-09 18:38:55] VERSION="7 (Core)"
[2026-01-09 18:38:55] ID="centos"
[2026-01-09 18:38:55] ID_LIKE="rhel fedora"
[2026-01-09 18:38:55] VERSION_ID="7"
[2026-01-09 18:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:38:55] ANSI_COLOR="0;31"
[2026-01-09 18:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:38:55] HOME_URL="https://www.centos.org/"
[2026-01-09 18:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:38:55] 
[2026-01-09 18:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:38:55] 
[2026-01-09 18:38:55] 2026-01-09 23:38:23,793 | INFO     | ***************************************
[2026-01-09 18:38:55] 2026-01-09 23:38:24,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 18:38:55] 2026-01-09 23:38:24,313 | INFO     | sufficient remaining disk space (72379006976 B)
[2026-01-09 18:38:55] 2026-01-09 23:38:24,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:38:55] 2026-01-09 23:38:24,314 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:38:55] 2026-01-09 23:38:24,314 | INFO     | update_server=False
[2026-01-09 18:38:55] 2026-01-09 23:38:24,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:38:55] 2026-01-09 23:38:24,446 | INFO     | all data control threads have been joined
[2026-01-09 18:38:55] 2026-01-09 23:38:24,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:38:55] 2026-01-09 23:38:24,626 | INFO     | aborting loop
[2026-01-09 18:38:55] 2026-01-09 23:38:24,742 | INFO     | all payload control threads have been joined
[2026-01-09 18:38:55] 2026-01-09 23:38:24,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:38:55] 2026-01-09 23:38:25,319 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,344 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,452 | INFO     | [data] control thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,593 | INFO     | all job control threads have been joined
[2026-01-09 18:38:55] 2026-01-09 23:38:25,632 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,654 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,747 | INFO     | [payload] control thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:38:55] 2026-01-09 23:38:25,917 | INFO     | [job] validate thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:25,976 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,081 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,121 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,600 | INFO     | [job] control thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,606 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:26,950 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:27,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:38:55] 2026-01-09 23:38:28,108 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:29,874 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:38:55] 2026-01-09 23:38:32,999 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:38:55] 2026-01-09 23:38:34,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466144532288)>', '<ExcThread(monitor, started 140465353516800)>']
[2026-01-09 18:38:55] 2026-01-09 23:38:39,798 | INFO     | all workflow threads have been joined
[2026-01-09 18:38:55] 2026-01-09 23:38:39,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:38:55] 2026-01-09 23:38:39,799 | INFO     | traces error code: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:39,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:38:55] 2026-01-09 23:38:55,062 | INFO     | PID=2202164 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:38:55] 2026-01-09 23:38:55,063 | INFO     | .. there are 29 such processes running
[2026-01-09 18:38:55] 2026-01-09 23:38:55,066 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:38:55] 2026-01-09 23:38:55,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:38:55] 2026-01-09 23:38:55,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:38:55] 2026-01-09 23:38:55,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:38:55] 2026-01-09 23:38:55,066 | INFO     | [monitor] control thread has ended
[2026-01-09 18:38:55] 2026-01-09 23:38:55,174 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:38:55] 2026-01-09 23:38:55,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:38:55] 2026-01-09 23:38:55,177 [wrapper] pilotpid: 2202164
[2026-01-09 18:38:55] 2026-01-09 23:38:55,180 [wrapper] Pilot exit status: 0
[2026-01-09 18:38:55] 2026-01-09 23:38:55,197 [wrapper] pandaids: 6963193698
[2026-01-09 18:38:55] 2026-01-09 23:38:55,293 [wrapper] cleanup supervisor_pilot 2910449 2202165
[2026-01-09 18:38:55] 2026-01-09 23:38:55,295 [wrapper] Test setup, not cleaning
[2026-01-09 18:38:55] 2026-01-09 23:38:55,297 [wrapper] apfmon messages muted
[2026-01-09 18:38:55] 2026-01-09 23:38:55,299 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:38:55] 2026-01-09 23:38:55,301 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:38:55]  *** Error codes and diagnostics ***
[2026-01-09 18:38:55]     "exeErrorCode": 0,
[2026-01-09 18:38:55]     "exeErrorDiag": "",
[2026-01-09 18:38:55]     "pilotErrorCode": 0,
[2026-01-09 18:38:55]     "pilotErrorDiag": "",
[2026-01-09 18:38:55]  *** Listing of results directory ***
[2026-01-09 18:38:55] total 450764
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 18:38:55] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas       100 Jan  9 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:38:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 16:33 run_atlas
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas       105 Jan  9 16:33 job.xml
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas 226702420 Jan  9 16:33 EVNT.47898824._001505.pool.root.1
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:33 start_atlas.sh
[2026-01-09 18:38:55] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 16:33 shared
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 16:33 input.tar.gz
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas         0 Jan  9 16:33 boinc_lockfile
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 16:33 pandaJob.out
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas        57 Jan  9 16:33 setup.sh.local
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas    989398 Jan  9 16:34 agis_schedconf.cvmfs.json
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:38:55] drwx------. 5 boincer umatlas      4096 Jan  9 16:34 pilot3
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 18:37 init_data.xml
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas       530 Jan  9 18:37 boinc_task_state.xml
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas 228113778 Jan  9 18:37 HITS.47898826._039171.pool.root.1
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas      1033 Jan  9 18:38 memory_monitor_summary.json
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas    396062 Jan  9 18:38 log.47898826._039171.job.log.tgz.1
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas      7779 Jan  9 18:38 heartbeat.json
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas        27 Jan  9 18:38 wrapper_checkpoint.txt
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:38 boinc_mmap_file
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas        95 Jan  9 18:38 pilot_heartbeat.json
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas       823 Jan  9 18:38 pilotlog.txt
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas   1032143 Jan  9 18:38 log.47898826._039171.job.log.1
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas       357 Jan  9 18:38 output.list
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:38 runtime_log
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas   1443840 Jan  9 18:38 result.tar.gz
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 18:38 runtime_log.err
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas       651 Jan  9 18:38 L8KODm4CJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmf1gKDmuQVlen.diag
[2026-01-09 18:38:55] -rw-r--r--. 1 boincer umatlas     21468 Jan  9 18:38 stderr.txt
[2026-01-09 18:38:55] HITS file was successfully produced:
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas 228113778 Jan  9 18:37 shared/HITS.pool.root.1
[2026-01-09 18:38:55]  *** Contents of shared directory: ***
[2026-01-09 18:38:55] total 446176
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas 226702420 Jan  9 16:33 ATLAS.root_0
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 16:33 start_atlas.sh
[2026-01-09 18:38:55] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 16:33 input.tar.gz
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas 228113778 Jan  9 18:37 HITS.pool.root.1
[2026-01-09 18:38:55] -rw-------. 1 boincer umatlas   1443840 Jan  9 18:38 result.tar.gz
18:38:57 (2197685): run_atlas exited; CPU time 44454.229700
18:38:57 (2197685): called boinc_finish(0)

</stderr_txt>
]]>

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